Bio-MUST-Drivers
view release on metacpan or search on metacpan
test/fragmentsseq_profile_out.fasta view on Meta::CPAN
GAAPVIAE--MAKK---M--GALTV-SVV-TLPFTMEGIRRAKNAEYGLKRLAKA-SDTV
IVIPND-------KLLEVAPKLPIQMAF-KVADEILVQ--AV-----KGI--T-ELITKP
--------------GLV---------------N---LDFNDVRAVMKD-GGVAMIG----
----------------I--------------------GES--------------------
-------D--------SEKRALEA------------------------------A-----
---EQA-----------------LNS-----PL--------LDV-------DISGAKGAL
ISISG-AD----V----KLEEAQQIIE------------YVTRNVD--------PKAQ--
------VIWGIQ--LEPELE-KTIRVMVIVTGV-T-SRY----------------ITFQE
-ET---PEP------------------SEEEVPPVK----------------ID-I----
-PEL--------------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALA----RAEREK------------------KERIEG---RGFEDVEDEIL
QVLHELKTVIKVIGVGGGGCNTIT------RM--YE----------EG-------IE---
G---AEL---------------I--ALNT---DVQHLYYTK---ANRRILIGKRRTRGLG
AGSLPQVGEEAARESEDEIKK-----LV------EG-----S---DMVFVTCGLGGGTGT
GAAPVVAE--AAQE---A--GALTI-AVV-TFPFSAEGAVRRANAEAGLERLREV-ADTV
IVIPND-------RLLEVVPNYPMQLAF-KVADEILMR--AV-----KGI--T-ELITKP
--------------ALI---------------N---LDFADVRTVMEK-GGVAMIG----
----------------L--------------------GEA--------------------
-------S--------GEDKAAES------------------------------V-----
---RKA-----------------LKS-----PL--------LDV-------DVSGAKAAL
test/hmmpress.log view on Meta::CPAN
6 PP
>> PCP
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 47.0 0.0 1.1e-15 5e-15 1 69 [. 214 283 .. 214 284 .. 0.95
2 ! 44.6 0.1 5.7e-15 2.7e-14 1 61 [. 1235 1296 .. 1235 1302 .. 0.91
Alignments for each domain:
== domain 1 score: 47.0 bits; conditional E-value: 1.1e-15
PCP 1 EteLaeiwaevLgve..rVgidDdFFelGGhSLlatrliarirqelgvelsvkdLfaaptvaalaallsed 69
E+++a+iw++vLgv +g++ +FF+lGG+S+ a+ ++a r+ g++l v++ +++p++ + a+l++++
GCA_000520115.1|seq20553 214 EKRMAQIWSDVLGVSlhDIGRRTSFFALGGDSMSAIHVAATCRH-DGYDLMVSEFLKSPELCQAAELAERS 283
899***********9889**************************.****************9999998775 PP
== domain 2 score: 44.6 bits; conditional E-value: 5.7e-15
PCP 1 EteLaeiwaevLgve..rVgidDdFFelGGhSLlatrliarirqelgvelsvkdLfaaptvaa 61
E+++a+iw++vLgv +g++ +FF+lGG+S+ a r+++ + +++++sv dL++ + +
GCA_000520115.1|seq20553 1235 EKRMAQIWSDVLGVSlhDIGRRTSFFALGGDSMSALRVVKLCKD-ARLHISVYDLLTWNILSQ 1296
899***********9889************************99.**********98766555 PP
>> CAL_domain
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 11.9 0.1 1.1e-05 5e-05 369 431 .. 45 107 .. 41 109 .. 0.86
2 ! 26.9 3.6 3.1e-10 1.4e-09 1 156 [. 775 914 .. 775 916 .. 0.90
3 ! 11.9 0.1 1.1e-05 5e-05 369 431 .. 1066 1128 .. 1062 1130 .. 0.86
test/longseq_profile_out.fasta view on Meta::CPAN
EAL------EGA-----DMVFVTCGLGGGTGTGAAPVIAE--MAKKM---GALTV-SVV-
TLPFTMEGIRRAKNAEYGLKRLAKA-----------------------SDTVIVIPND--
-----KLLEVAPKLPIQMAFKVADEILVQAVKGIT---ELITKP--------------GL
VN---------------LDFNDVRAVMKD-GGVAMIGI--------------------GE
SD---------------------------SEKRALEAA----------------------
--------EQA-----------------LNSPL--------LDV-------DISGAKGAL
ISISG-ADV----KLEEAQQIIE------------YVTRNVD--------PKAQ------
--VIWGIQ--LEPELEKTIRVM--------------VIVTGVTS-------------RY-
----------ITFQE-ET---PEP------------------SEEEVPPVK--------I
D-I-----PEL--------------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALA----RAEREK------------------KERIEG---RGFEDVEDEIL
QVLHELKTVIKVIGVGGGGCNTITRMYEEG----------IEG---AELI----------
-----ALNT---DVQHLYYTK---ANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIK
KLV------EGS-----DMVFVTCGLGGGTGTGAAPVVAE--AAQEA---GALTI-AVV-
TFPFSAEGAVRRANAEAGLERLREV-----------------------ADTVIVIPND--
-----RLLEVVPNYPMQLAFKVADEILMRAVKGIT---ELITKP--------------AL
IN---------------LDFADVRTVMEK-GGVAMIGL--------------------GE
AS---------------------------GEDKAAESV----------------------
--------RKA-----------------LKSPL--------LDV-------DVSGAKAAL
VNVTGGPDM----TIEEAESVIE------------EIYSKVD--------PDAR------
test/seq_in1.fasta view on Meta::CPAN
VTGGSDMSIEEAEGVVEEIYDRIDPDARIIWGTSVDDELEGMMRTMIVVTGVESPQIYGR
NGEAQAHAEERLEDIDYVE
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
MLKLVENVVERVSAEEQKPQEIQVPQSSIDEELKKIVEQIKARIYVVGVGGAGCNTVNRM
MEVGVTGAKIIAVNTDAQDLLKIKAHQKILIGKELTRGLGAGNDPKIGEEAAKESERELR
EALEGADMVFVTCGLGGGTGTGAAPVIAEMAKKMGALTVSVVTLPFTMEGIRRAKNAEYG
LKRLAKASDTVIVIPNDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKPGLVNLDF
NDVRAVMKDGGVAMIGIGESDSEKRALEAAEQALNSPLLDVDISGAKGALISISGADVKL
EEAQQIIEYVTRNVDPKAQVIWGIQLEPELEKTIRVMVIVTGVTSRYITFQEETPEPSEE
EVPPVKIDIPEL
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALARAEREKKERIEGRGFEDVEDEILQVLHELKTVIKVIGVGGGGCNTITR
MYEEGIEGAELIALNTDVQHLYYTKANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEI
KKLVEGSDMVFVTCGLGGGTGTGAAPVVAEAAQEAGALTIAVVTFPFSAEGAVRRANAEA
GLERLREVADTVIVIPNDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITKPALINLD
FADVRTVMEKGGVAMIGLGEASGEDKAAESVRKALKSPLLDVDVSGAKAALVNVTGGPDM
TIEEAESVIEEIYSKVDPDARIIWGAMIDPELENTMRTLIIVTGVKSPQILGRKGYPVTR
KYGIDFVR
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
MDSIVQDAIDEAEESEDSASEPADVAGGGGDTVPTGTMTDNELEDVLQELQTNITVVGCG
GAGSNTVDRMATEGIHGADLVAANTDVQHLVDIEADTKILMGQQKTKGRGAGSLPQVGEE
test/seq_out1_clustal.fasta view on Meta::CPAN
ISGANSALVNVTGGSDMSIEEAEGVVEEIYDRIDPDARIIWGTSVDDELEGMMRTMIVVT
GVESPQIYGRNGEAQAH--------------------AEERLEDIDYVE
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVERVSAEEQKP----------------QEIQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAKIIAVNTDAQDLLKIKAHQKILIGKELTRGLGAG
NDPKIGEEAAKESERELREALEGADMVFVTCGLGGGTGTGAAPVIAEMAKKMGALTVSVV
TLPFTMEGIRRAKNAEYGLKRLAKASDTVIVIPNDKLLEVAPKLPIQMAFKVADEILVQA
VKGITELITKPGLVNLDFNDVRAVMKDGGVAMIGIGESDSEKRALEAAEQALNSPLLDVD
ISGAKGALISISGA-DVKLEEAQQIIEYVTRNVDPKAQVIWGIQLEPELEKTIRVMVIVT
GVTSRYITFQEET-PEPSEEE--VPPVKIDIPEL---------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALARAEREKKERIEGR-----------------GFEDVEDEILQVLHELKT
VIKVIGVGGGGCNTITRMYEEGIEGAELIALNTDVQHLYYTKANRRILIGKRRTRGLGAG
SLPQVGEEAARESEDEIKKLVEGSDMVFVTCGLGGGTGTGAAPVVAEAAQEAGALTIAVV
TFPFSAEGAVRRANAEAGLERLREVADTVIVIPNDRLLEVVPNYPMQLAFKVADEILMRA
VKGITELITKPALINLDFADVRTVMEKGGVAMIGLGEASGEDKAAESVRKALKSPLLDVD
VSGAKAALVNVTGGPDMTIEEAESVIEEIYSKVDPDARIIWGAMIDPELENTMRTLIIVT
GVKSPQILGRKGYPVTRKY------------------------GIDFVR
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
--MDSIVQDAIDEAEESEDSASEP------ADVAGGGGDTVPTGTMTDNELEDVLQELQT
NITVVGCGGAGSNTVDRMATEGIHGADLVAANTDVQHLVDIEADTKILMGQQKTKGRGAG
test/seq_out1_gap_mafft.fasta view on Meta::CPAN
---LEDIDYVE
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVE-RVSAEEQ------------------K-PQEIQ----VPQSSIDEELK
KIVEQIKARIYVVGVGGAGCNTVNRMMEVGVTGAKIIAVNTDAQDLLKIKAHQKILIGKE
LTRGLGAGNDPKIGEEAAKESERELREALEGADMVFVTCGLGGGTGTGAAPVIAEMAKKM
GALTVSVVTLPFTMEGIRRAKNAEYGLKRLAKASDTVIVIPNDKLLEVAPKLPIQMAFKV
ADEILVQAVKGITELITKPGLVNLDFNDVRAVMKDGGVAMIGIGESDSEKRALEAAEQAL
NSPLLDVDISGAKGALISISG-ADVKLEEAQQIIEYVTRNVDPKAQVIWGIQLEPELEKT
IRVMVIVTGVTSRY-ITFQ--EE---------------------TPEPSEEEVPPVK---
---ID-IPEL-
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALA----RAEREK------------------KERIEG---RGFEDVEDEIL
QVLHELKTVIKVIGVGGGGCNTITRMYEEGIEGAELIALNTDVQHLYYTKANRRILIGKR
RTRGLGAGSLPQVGEEAARESEDEIKKLVEGSDMVFVTCGLGGGTGTGAAPVVAEAAQEA
GALTIAVVTFPFSAEGAVRRANAEAGLERLREVADTVIVIPNDRLLEVVPNYPMQLAFKV
ADEILMRAVKGITELITKPALINLDFADVRTVMEKGGVAMIGLGEASGEDKAAESVRKAL
KSPLLDVDVSGAKAALVNVTGGPDMTIEEAESVIEEIYSKVDPDARIIWGAMIDPELENT
MRTLIIVTGVKSPQILGRK--GY------------------------------PVTR---
---KYGIDFVR
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
--MDSIVQDAID----EAEES------EDSASEPADVAGGGGDTV----PTGTMTDNELE
test/seq_out1_mafft.fasta view on Meta::CPAN
--LEDIDYVE
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVE-RVSAEEQ------------------K-PQEIQ----VPQSSIDEELK
KIVEQIKARIYVVGVGGAGCNTVNRMMEVGVTGAKIIAVNTDAQDLLKIKAHQKILIGKE
LTRGLGAGNDPKIGEEAAKESERELREALEGADMVFVTCGLGGGTGTGAAPVIAEMAKKM
GALTVSVVTLPFTMEGIRRAKNAEYGLKRLAKASDTVIVIPNDKLLEVAPKLPIQMAFKV
ADEILVQAVKGITELITKPGLVNLDFNDVRAVMKDGGVAMIGIGESDSEKRALEAAEQAL
NSPLLDVDISGAKGALISISG-ADVKLEEAQQIIEYVTRNVDPKAQVIWGIQLEPELEKT
IRVMVIVTGVTSRY-ITFQE-ET---PEP------------------SEEEVPPVK----
--ID-IPEL-
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALA----RAEREK------------------KERIEG---RGFEDVEDEIL
QVLHELKTVIKVIGVGGGGCNTITRMYEEGIEGAELIALNTDVQHLYYTKANRRILIGKR
RTRGLGAGSLPQVGEEAARESEDEIKKLVEGSDMVFVTCGLGGGTGTGAAPVVAEAAQEA
GALTIAVVTFPFSAEGAVRRANAEAGLERLREVADTVIVIPNDRLLEVVPNYPMQLAFKV
ADEILMRAVKGITELITKPALINLDFADVRTVMEKGGVAMIGLGEASGEDKAAESVRKAL
KSPLLDVDVSGAKAALVNVTGGPDMTIEEAESVIEEIYSKVDPDARIIWGAMIDPELENT
MRTLIIVTGVKSPQILGRK--GY---PVT--------------------------R----
--KYGIDFVR
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
--MDSIVQDAID----EAEES------EDSASEPADVAGGGGDTV----PTGTMTDNELE
test/seq_out1_short_clustal.fasta view on Meta::CPAN
ISGANSALVNVTGGSDMSIEEAEGVVEEIYDRIDPDARIIWGTSVDDELEGMMRTMIVVT
GVESPQIYGRNGEAQAH--------------------AEERLEDIDYVE
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVERVSAEEQKP----------------QEIQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAKIIAVNTDAQDLLKIKAHQKILIGKELTRGLGAG
NDPKIGEEAAKESERELREALEGADMVFVTCGLGGGTGTGAAPVIAEMAKKMGALTVSVV
TLPFTMEGIRRAKNAEYGLKRLAKASDTVIVIPNDKLLEVAPKLPIQMAFKVADEILVQA
VKGITELITKPGLVNLDFNDVRAVMKDGGVAMIGIGESDSEKRALEAAEQALNSPLLDVD
ISGAKGALISISGA-DVKLEEAQQIIEYVTRNVDPKAQVIWGIQLEPELEKTIRVMVIVT
GVTSRYITFQEET-PEPSEEE--VPPVKIDIPEL---------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1
MFMKSIVEEALARAEREKKERIEGR-----------------GFEDVEDEILQVLHELKT
VIKVIGVGGGGCNTITRMYEEGIEGAELIALNTDVQHLYYTKANRRILIGKRRTRGLGAG
SLPQVGEEAARESEDEIKKLVEGSDMVFVTCGLGGGTGTGAAPVVAEAAQEAGALTIAVV
TFPFSAEGAVRRANAEAGLERLREVADTVIVIPNDRLLEVVPNYPMQLAFKVADEILMRA
VKGITELITKPALINLDFADVRTVMEKGGVAMIGLGEASGEDKAAESVRKALKSPLLDVD
VSGAKAALVNVTGGPDMTIEEAESVIEEIYSKVDPDARIIWGAMIDPELENTMRTLIIVT
GVKSPQILGRKGYPVTRKY------------------------GIDFVR
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
--MDSIVQDAIDEAEESEDSASEP------ADVAGGGGDTVPTGTMTDNELEDVLQELQT
NITVVGCGGAGSNTVDRMATEGIHGADLVAANTDVQHLVDIEADTKILMGQQKTKGRGAG
test/seq_profile_out.fasta view on Meta::CPAN
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVE-RVSAEEQ------------------K-PQEIQ----VPQSSIDEELK
KIVEQIKARIYVVGVGGAGCNTVNRMMEVGVTGAKI---------------IAVNT---D
AQDLLKIKAHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALEG------ADMVF
VTCGLGGGTGTGAAPVIAEMAKKM--GALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-A
SDTVIVIPNDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITK-----PGLVNLDFND
VRAVMKD-GGVAMIGIGESD----------------------------------SEKRAL
EAAEQALNSPL-LDVDISGA--KGALISISG-ADV----KLEEAQQIIEYVTRNVDPKAQ
VIWGIQLEPELEKTIRVMVIVTGV-TSRY-ITFQE-ET---PEP----------------
--SEEEVPPVK---------ID-IPEL-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALA----RAEREK------------------KERIEG---RGFEDVEDEIL
QVLHELKTVIKVIGVGGGGCNTITRMYEEGIEGAEL---------------IALNT---D
VQHLYYTKANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVEG------SDMVF
VTCGLGGGTGTGAAPVVAEAAQEA--GALTIAVVTFPFSAEGAVRRANAEAGLERLRE-V
ADTVIVIPNDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITK-----PALINLDFAD
VRTVMEK-GGVAMIGLGEAS----------------------------------GEDKAA
ESVRKALKSPL-LDVDVSGA--KAALVNVTGGPDM----TIEEAESVIEEIYSKVDPDAR
IIWGAMIDPELENTMRTLIIVTGV-KSPQILGRK--GY---PVT----------------
----------R---------KYGIDFVR----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
test/seq_profile_out.fasta.old view on Meta::CPAN
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVE-RVSAEEQ------------------K-PQEIQ----VPQSSIDEELK
KIVEQIKARIYVVGVGGAGCNTVNRMMEVGVTGAKI---------------IAVNT---D
AQDLLKIKAHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALEG------ADMVF
VTCGLGGGTGTGAAPVIAEMAKKM--GALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-A
SDTVIVIPNDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITK-----PGLVNLDFND
VRAVMKD-GGVAMIGIGES-------------------------------D---SEKRAL
EAAEQALNSP-----LLDVDISGA--KGALISISG-ADV----KLEEAQQIIEYVTRNVD
PKAQVIWGIQLEPELEKTIRVMVIVTGV-TSRY-ITFQE-ET---PEP------------
------SEEEVPPVK----------ID-IPEL-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALA----RAEREK------------------KERIEG---RGFEDVEDEIL
QVLHELKTVIKVIGVGGGGCNTITRMYEEGIEGAEL---------------IALNT---D
VQHLYYTKANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVEG------SDMVF
VTCGLGGGTGTGAAPVVAEAAQEA--GALTIAVVTFPFSAEGAVRRANAEAGLERLRE-V
ADTVIVIPNDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITK-----PALINLDFAD
VRTVMEK-GGVAMIGLGEA-------------------------------S---GEDKAA
ESVRKALKSP-----LLDVDVSGA--KAALVNVTGGPDM----TIEEAESVIEEIYSKVD
PDARIIWGAMIDPELENTMRTLIIVTGV-KSPQILGRK--GY---PVT------------
--------------R----------KYGIDFVR----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
test/seq_profiles2_clustal.fasta view on Meta::CPAN
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVERVSAEEQKP----------------QEIQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAK---------------IIAVNT---DAQDLLKIK
AHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALEG------ADMVFVTCGLGGG
TGTGAAPVIAEMAKKMG--ALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-ASDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKPG-----LVNLDFNDVRAVMK-D
GGVAMIGIGESDSEKRALEA------------------------------A-EQALNSPL
LDVDIS--GAKGALISISGA-DVK----LEEAQQIIEYVTRNVDPKAQVIWGIQLEPELE
KTIRVMVIVTGVTS-RYITFQEET-PEPSEEE--VPPVKIDIPEL---------------
-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1
MFMKSIVEEALARAEREKKERIEGR-----------------GFEDVEDEILQVLHELKT
VIKVIGVGGGGCNTITRMYEEGIEGAE---------------LIALNT---DVQHLYYTK
ANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVEG------SDMVFVTCGLGGG
TGTGAAPVVAEAAQEAG--ALTIAVVTFPFSAEGAVRRANAEAGLERLRE-VADTVIVIP
NDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITKPA-----LINLDFADVRTVME-K
GGVAMIGLGEASGEDKAAES------------------------------V-RKALKSPL
LDVDVS--GAKAALVNVTGGPDMT----IEEAESVIEEIYSKVDPDARIIWGAMIDPELE
NTMRTLIIVTGVKS-PQILGRKGYPVTRKY-------------------------GIDFV
R----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
test/seq_profiles_mafft.fasta view on Meta::CPAN
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVE-RVSAEEQ------------------K-PQEIQ----VPQSSIDEELK
KIVEQIKARIYVVGVGGAGCNTVNRMMEVGVTGAKI---------------IAVNT---D
AQDLLKIKAHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALEG------ADMVF
VTCGLGGGTGTGAAPVIAEMAKKM--GALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-A
SDTVIVIPNDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITK-----PGLVNLDFND
VRAVMKD-GGVAMIGIGES-------------------------------D---SEKRAL
EAAEQALNSP-----LLDVDISGA--KGALISISG-ADV----KLEEAQQIIEYVTRNVD
PKAQVIWGIQLEPELEKTIRVMVIVTGV-TSRY-ITFQE-ET---PEP------------
------SEEEVPPVK----------ID-IPEL-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1 PE=3 SV=1
MFMKSIVEEALA----RAEREK------------------KERIEG---RGFEDVEDEIL
QVLHELKTVIKVIGVGGGGCNTITRMYEEGIEGAEL---------------IALNT---D
VQHLYYTKANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVEG------SDMVF
VTCGLGGGTGTGAAPVVAEAAQEA--GALTIAVVTFPFSAEGAVRRANAEAGLERLRE-V
ADTVIVIPNDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITK-----PALINLDFAD
VRTVMEK-GGVAMIGLGEA-------------------------------S---GEDKAA
ESVRKALKSP-----LLDVDVSGA--KAALVNVTGGPDM----TIEEAESVIEEIYSKVD
PDARIIWGAMIDPELENTMRTLIIVTGV-KSPQILGRK--GY---PVT------------
--------------R----------KYGIDFVR----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
test/seqs_2profile_out_clustal.fasta view on Meta::CPAN
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVERVSAEEQKP----------------QEIQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAK---------------IIAVNT---DAQDLLKIK
AHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALE------GADMVFVTCGLGGG
TGTGAAPVIAEMAKKMG--ALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-ASDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKP-----GLVNLDFNDVRAVMKD-
GGVAMIGIGESDSEKRALE-------------------------------AAEQALNSPL
LDVDIS--GAKGALISISGA-DVK----LEEAQQIIEYVTRNVDPKAQVIWGIQLEPELE
KTIRVMVIVTGVTS-RYITFQEET-PEPSEEE--VPPVKIDIPEL---------------
-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1
MFMKSIVEEALARAEREKKERIEGR-----------------GFEDVEDEILQVLHELKT
VIKVIGVGGGGCNTITRMYEEGIEGAE---------------LIALNT---DVQHLYYTK
ANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVE------GSDMVFVTCGLGGG
TGTGAAPVVAEAAQEAG--ALTIAVVTFPFSAEGAVRRANAEAGLERLRE-VADTVIVIP
NDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITKP-----ALINLDFADVRTVMEK-
GGVAMIGLGEASGEDKAAE-------------------------------SVRKALKSPL
LDVDVS--GAKAALVNVTGGPDMT----IEEAESVIEEIYSKVDPDARIIWGAMIDPELE
NTMRTLIIVTGVKS-PQILGRKGYPVTRKY-------------------------GIDFV
R----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
test/seqs_profile_out_clustal.fasta view on Meta::CPAN
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVERVSAEEQKP----------------QEIQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGA---------------KIIAVNT---DAQDLLKIK
AHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALE------GADMVFVTCGLGGG
TGTGAAPVIAEMAKKMG--ALTVSVVTLPFTMEGIRRAKNAEYGLKRLAKA-SDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITEL-----ITKPGLVNLDFNDVRAVMKD-
GGVAMIGIGESDSEKRALE----------------------------------AAEQALN
SPLLDVDISGAKGALISISGA-DVK----LEEAQQIIEYVTRNVDPKAQVIWGIQLEPEL
EKTIRVMVIVTGV-TSRYITFQEET-PEPSEEE--VPPVKIDIPEL--------------
-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1
MFMKSIVEEALARAEREKKERIEGR-----------------GFEDVEDEILQVLHELKT
VIKVIGVGGGGCNTITRMYEEGIEGA---------------ELIALNT---DVQHLYYTK
ANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVE------GSDMVFVTCGLGGG
TGTGAAPVVAEAAQEAG--ALTIAVVTFPFSAEGAVRRANAEAGLERLREV-ADTVIVIP
NDRLLEVVPNYPMQLAFKVADEILMRAVKGITEL-----ITKPALINLDFADVRTVMEK-
GGVAMIGLGEASGEDKAAE----------------------------------SVRKALK
SPLLDVDVSGAKAALVNVTGGPDMT----IEEAESVIEEIYSKVDPDARIIWGAMIDPEL
ENTMRTLIIVTGV-KSPQILGRKGYPVTRKY------------------------GIDFV
R----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
( run in 1.942 second using v1.01-cache-2.11-cpan-5735350b133 )