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=for todo TODO: explain other formats and subtleties (e.g., families)

    # Genus species@protacc
    >Arabidopsis thaliana@AAL15244
    # Genus species_taxonid@protacc
    >Arabidopsis thaliana_3702@AAO44026
    # Genus species_subspecies_taxonid@protacc
    >Arabidopsis lyrata_lyrata_81972@EFH60692
    # Genus species_taxonid@protacc
    >Archaeoglobus fulgidus_2234@WP_048095550
    # Genus species_strain_taxonid@protacc
    >Archaeoglobus fulgidus_DSM4304_224325@AAB90113
    # Genus species_strain_taxonid@protacc
    >archaeon 13_1_20CM_2_54_9_1805008@OLE74253

=head3 Reference organisms (C<ref_orgs>, C<ref_banks>)

=for todo TODO: discuss inst-abbr-ids.pl

The reference proteome set must be described in the C<config> file. Firstly,
each of the reference proteomes must be in C<FASTA> format in order to be
formatted as a C<BLAST> database with the C<makeblastdb> command. For