Bio-ToolBox
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- Changed script bar2wig.pl to require method for combining values and
removed interbase option
- Updated peak indentification in script map_nucleosomes.pl to use the
tag dataset and not the scan dataset
- Updated script big_file2gff3.pl to produce more useful conf files with
BigWigSets
- Added overlap data column to ouput of script
get_intersecting_features.pl and added --set_strand option to enforce
directionality
- Added three new functions to script manipulate_datasets.pl, including
new column, strandsign, and mergestrand
- Fixed script wig2data.pl so it works now
- Updated script get_feature_info.pl to parse an attribute list from the
command line
- Improved handling of metadata when opening tim data files
v1.4.2 (svn r129)
- Added fast low level coverage function to the script bam2wig.pl
- Fixed script pull_features.pl to keep the order of features in the
list file.
- Fixed script bar2wig.pl to correctly identify the chromosome name.
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