Bio-ToolBox

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CHANGES  view on Meta::CPAN

	- Changed script bar2wig.pl to require method for combining values and
	removed interbase option
	- Updated peak indentification in script map_nucleosomes.pl to use the
	tag dataset and not the scan dataset
	- Updated script big_file2gff3.pl to produce more useful conf files with
	BigWigSets
	- Added overlap data column to ouput of script
	get_intersecting_features.pl and added --set_strand option to enforce
	directionality
	- Added three new functions to script manipulate_datasets.pl, including
	new column, strandsign, and mergestrand
	- Fixed script wig2data.pl so it works now
	- Updated script get_feature_info.pl to parse an attribute list from the
	command line
	- Improved handling of metadata when opening tim data files

v1.4.2 (svn r129)
	- Added fast low level coverage function to the script bam2wig.pl
	- Fixed script pull_features.pl to keep the order of features in the
	list file.
	- Fixed script bar2wig.pl to correctly identify the chromosome name.



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