AcePerl
view release on metacpan or search on metacpan
Ace/Browser/AceSubs.pm view on Meta::CPAN
# set up the privacy statement link
my $privacy_link = ( Configuration()->Print_privacy_statement &&
url(-relative=>1) ne PRIVACY())
?
a({ -href=>ResolveUrl(PRIVACY."/$name") },'Privacy Statement')
: '';
my ($home,$label) = @{Configuration()->Home};
my $hlink = $home ? a({-href=>$home},$label) : '';
# Either generate a pointer to ACeDB home page, or the copyright statement.
my $clink = Configuration()->Copyright ? a({-href=>Configuration()->Copyright,-target=>"_new"},'Copyright Statement')
: qq(<A HREF="http://stein.cshl.org/AcePerl">AcePerl Home Page</A>);
return <<END;
<TABLE WIDTH="100%" BORDER=0 CELLPADDING=0 CELLSPACING=0>
<TR CLASS="technicalinfo">
<TD CLASS="small" VALIGN="TOP">
$hlink<br>$clink
</TD>
Ace/Local.pm view on Meta::CPAN
Used when invoking I<gifaceclient>. Indicates the host to connect to.
=item B<-port>
Used when invoking I<gifaceclient>. Indicates the port to connect to.
=item B<-nosync>
Ordinarily Ace::Local synchronizes with the tace/giface prompt,
throwing out all warnings and copyright messages. If this is set,
Ace::Local will not do so. In this case you must call the low_read()
method until it returns undef in order to synchronize.
=back
=head2 query()
$status = $accessor->query('query string');
Send the query string to the server and return a true value if
acebrowser/conf/elegans.pm view on Meta::CPAN
[ ' John Spieth <jspieth@watson.wustl.edu>' => 'St. Louis sequence annotations; gene structures' ],
[ ' worm@sanger.ac.uk' => 'Cambridge sequence annotations; gene structures' ],
[ ' Alan Coulson <alan@sanger.ac.uk> ' => 'physical map' ],
);
@FEEDBACK_CHECKED = (0); # number zero is paul
# position of the chromosome tables, in URL space
$CHROMOSOME_TABLES = "$WB/chromosomes";
$CHROMOSOME_TABLE_LENGTH = 2_000_000;
# all-important copyright statement
$COPYRIGHT = "$WB/copyright.html";
# ========= transcript script ===========
# dimensions of the transcript picture shown in the sequence screen
@TRANSCRIPT_DIMENSIONS = ($PAGEWIDTH,150);
$TRANSCRIPT_HEIGHT = 10;
# ======== geneapplet script ==========
$JADEX_PORT = 2005;
$JADEX_PATH = '/applets/jadex.jar';
acelib/freesubs.c view on Meta::CPAN
* Created: Sun Oct 27 18:16:01 1991 (rd)
*-------------------------------------------------------------------
*/
/* $Id: freesubs.c,v 1.1 2002/11/14 20:00:06 lstein Exp $ */
#include "regular.h"
#include "version.h"
#include <ctype.h>
/* free package version and copyright string. */
/* */
#define FREE_TITLE "Free library"
#define FREE_DESC "Sanger Centre Informatics utilities library."
#define FREE_VERSION 1
#define FREE_RELEASE 1
#define FREE_UPDATE 1
#define FREE_VERSION_NUMBER UT_MAKE_VERSION_NUMBER(FREE_VERSION, FREE_RELEASE, FREE_UPDATE)
UT_COPYRIGHT_STRING(FREE_TITLE, FREE_VERSION, FREE_RELEASE, FREE_UPDATE, FREE_DESC)
acelib/wh/version.h view on Meta::CPAN
*-------------------------------------------------------------------
* This file is part of the ACEDB genome database package, written by
* Richard Durbin (Sanger Centre, UK) rd@sanger.ac.uk, and
* Jean Thierry-Mieg (CRBM du CNRS, France) mieg@kaa.crbm.cnrs-mop.fr
*
* Description: Macros to support version numbering of libraries and
* applications in acedb.
* Exported functions:
* HISTORY:
* Last edited: Dec 10 13:32 1998 (edgrif)
* * Dec 3 14:37 1998 (edgrif): Set up macros to insert copyright strings.
* Created: Tue Dec 1 13:29:08 1998 (edgrif)
* CVS info: $Id: version.h,v 1.1 2002/11/14 20:00:06 lstein Exp $
*-------------------------------------------------------------------
*/
#ifndef UT_VERSION_H
#define UT_VERSION_H
/* Tools for creating version strings in an application or library. */
acelib/wh/version.h view on Meta::CPAN
#define UT_MAKE_VERSION_NUMBER(VERSION, RELEASE, UPDATE) \
((VERSION * 10000) + (RELEASE * 100) + UPDATE)
/* 3) Make a version string containing the title of the application/library */
/* and the version, release and update numbers. */
/* */
#define UT_MAKE_VERSION_STRING(TITLE, VERSION, RELEASE, UPDATE) \
TITLE " - " UT_MAKESTRING(VERSION) "." UT_MAKESTRING(RELEASE) "." UT_MAKESTRING(UPDATE)
/* 4) Macro for creating a standard copyright string to be inserted into */
/* compiled applications and libraries. The macro ensures a common */
/* format for version numbers etc. */
/* */
/* The macro is a statement, NOT an expression, but does NOT require a */
/* terminating semi-colon. The macro should be coded like this: */
/* */
/* UT_COPYRIGHT_STRING(prefix, title, description) */
/* */
/* where prefix is some a string locally used to prefix variables */
/* where title is a string of the form "Appname 1.0.1" */
acelib/wh/version.h view on Meta::CPAN
/* */
#define UT_COPYRIGHT() \
"@(#) Copyright (c): J Thierry-Mieg and R Durbin, 1998 \n" \
"@(#) \n" \
"@(#) This file contains the above Sanger Informatics Group library, \n" \
"@(#) written by Richard Durbin (Sanger Centre, UK) rd@sanger.ac.uk \n" \
"@(#) Jean Thierry-Mieg (CRBM du CNRS, France) mieg@kaa.crbm.cnrs-mop.fr \n" \
"@(#) Ed Griffiths (Sanger Centre, UK) edgrif@sanger.ac.uk \n" \
"@(#) Fred Wobus (Sanger Centre, UK) fw@sanger.ac.uk \n" \
"@(#) You may redistribute this software subject to the conditions in the \n" \
"@(#) accompanying copyright file. Anyone interested in obtaining an up to date \n" \
"@(#) version should contact one of the authors at the above email addresses. \n"
#define UT_COPYRIGHT_STRING(TITLE, VERSION, RELEASE, UPDATE, DESCRIPTION_STRING) \
static const char *ut_copyright_string = \
"@(#) \n" \
"@(#) --------------------------------------------------------------------------\n" \
"@(#) Title/Version: "UT_MAKE_VERSION_STRING(TITLE, VERSION, RELEASE, UPDATE)"\n" \
"@(#) Compiled: "__DATE__" "__TIME__"\n" \
"@(#) Description: " DESCRIPTION_STRING"\n" \
UT_COPYRIGHT() \
"@(#) --------------------------------------------------------------------------\n" \
"@(#) \n" ;
docs/NEW_DB.HOWTO view on Meta::CPAN
// Reindexed 742 tags in 0 classes containing 0 objects totalling 0 nodes
**** Program tace, compiled on: Jul 6 1999 10:58:24 ****
**** Using ACEDB Version 4_7i, compiled on: Jul 6 1999 10:58:14 ****
Code by: Jean Thierry-Mieg (CNRS, France) mieg@crbm.cnrs-mop.fr
Richard Durbin (Sanger Centre, UK) rd@sanger.ac.uk
Simon Kelley (Sanger Centre, UK) srk@sanger.ac.uk
You may redistribute this program and database subject to the
conditions in the accompanying copyright file. Anyone interested in
maintaining an up-to-date version should contact one of the authors
at the above email addresses.
// Type ? for a list of options
acedb> <parse /usr/local/acedb/my_db/raw/my_content.ace>
// Parsing file /usr/local/acedb/raw/my_content.ace
// 123 objects read with 0 errors
// 123 Active Objects
acedb> <save>
( run in 2.352 seconds using v1.01-cache-2.11-cpan-bbcb1afb8fc )