Alvis-QueryFilter

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null mutant	node_37 
null mutation	node_37 
onset of endospore formation	node_12 
onset of solvent formation	node_12 
onset of sporulation	node_12 
onset of stationary phase	node_12 
open reading frame	node_27 
operon organization	node_35 
operon structure	node_35 
penicillinase gene	node_15 
penicillin-binding	node_15 
penicillin-binding protein	node_15 
phosphate starvation condition	node_13 
phosphate starvation-inducible promoter	node_13 
phosphate-starvation induction	node_13 
phosphoenolpyruvate-dependent	node_15 
pock formation	node_37 
point mutation	node_37 
positive regulator	node_21 
presence of glucose	node_14 
promoter activation	node_24 
promoter recognition	node_24 

t/test/resources/onto_nodes  view on Meta::CPAN

single promoter	node_24 
spore formation	node_12 
spore germination	node_12 
sporulation defect	node_16 
sporulation deficiency	node_16 
sporulation-deficient phenotype	node_16 
sporulation gene expression	node_12 
sporulation genes	node_12 
stationary phase of growth	node_11 
strong promoter	node_24 
strong ribosome-binding site	node_24 
temperature-sensitive	node_16 
temperature-sensitive sporulation phenotype	node_16 
temperature shift	node_16 
temperature upshift	node_16 
transcriptional activation	node_20 
transcriptional activator gene	node_20 
transcription factor	node_20 
transcription initiation	node_28 
transcription initiation nucleotide	node_24 
transcription initiation region	node_24 

t/test/resources/terms  view on Meta::CPAN

3-phosphoglycerate kinase 	3-phosphoglycerate kinase
50s subunit of the ribosome 	50S subunit of the ribosome
5-methyltryptophan resistance 	5-methyltryptophan resistance
5-methyltryptophan-resistance	5-methyltryptophan resistance
5-phosphoribosyl 1-pyrophosphate 	5-phosphoribosyl 1-pyrophosphate
5-phosphoribosyl-1-pyrophosphate	5-phosphoribosyl 1-pyrophosphate
6-hdno expression 	6-HDNO expression
6-transmembrane configuration 	6-transmembrane configuration
aa protein 	aa protein
aa sequence of the protein 	aa sequence of the protein
ability to bind 	ability to bind
abnormal cell division 	abnormal cell division
abortive infection of bacteriophage 	abortive infection of bacteriophage
absence of erythromycin 	absence of erythromycin
absence of fatty acid synthesis 	absence of fatty acid synthesis
absence of glucose 	absence of glucose
absence of inducer 	absence of inducer
absence of induction 	absence of induction
absence of nucleoside triphosphates 	absence of nucleoside triphosphates
absence of tryptophan 	absence of tryptophan
absence of xylose 	absence of xylose

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asparagine synthetase 	asparagine synthetase
aspartate transcarbamylase 	aspartate transcarbamylase
asporogenous mutant 	asporogenous mutant
assay condition 	assay condition
assembly into the coat 	assembly into the coat
assembly process 	assembly process
asymmetric division 	asymmetric division
asymmetric septation 	asymmetric septation
asymmetric septum 	asymmetric septum
asymmetric unit 	asymmetric unit
atp-binding cassette 	ATP-binding cassette
atp-binding-cassette	ATP-binding cassette
atp-binding cassette transporter 	ATP-binding cassette transporter
atp-binding motif 	ATP-binding motif
atp binding site 	ATP-binding site
atp-binding site 	ATP-binding site
atp-dependent protease 	ATP-dependent protease
at rich 	AT-rich
a+t rich region 	A+T-rich region
a+t-rich region 	A+T-rich region
attachment site 	attachment site
attenuated vaccine 	attenuated vaccine
attenuation mechanism 	attenuation mechanism
attenuation protein 	attenuation protein
attenuation region 	attenuation region
autolysin production 	autolysin production

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beta subunit 	beta subunit
beta-subunit	beta subunit
bicistronic operon 	bicistronic operon
bifunctional enzyme 	bifunctional enzyme
bifunctional protein 	bifunctional protein
bifurcation bulge 	bifurcation bulge
bile acid 	bile acid
bile salt 	bile salt
bimolecular collision 	bimolecular collision
binary vector system 	binary vector system
binding affinity 	binding affinity
binding attenuation protein 	binding attenuation protein
binding component 	binding component
binding motif 	binding motif
binding preference 	binding preference
binding protein 	binding protein
binding region for protein 	binding region for protein
binding sequence 	binding sequence
binding site for protein 	binding site for protein
binding surface 	binding surface
biochemical analysis 	biochemical analysis
biochemical characterization 	biochemical characterization
biochemical evidence 	biochemical evidence
biochemical property 	biochemical property
biochemical study 	biochemical study
biological assay 	biological assay
biological function 	biological function
biosynthesis gene 	biosynthesis gene
biosynthesis of methionine 	biosynthesis of methionine
biosynthetic enzyme 	biosynthetic enzyme

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contact site 	contact site
control of gene expression 	control of gene expression
control of late transcription 	control of late transcription
control of the sporulation 	sporulation control
control of transcription 	control of transcription
control region 	control region
control site 	control site
convergent transcription 	convergent transcription
copy number 	copy number
copy-number	copy number
core binding 	core-binding
core binding region 	core binding region
core enzyme 	core-enzyme
core-enzyme	core enzyme
core polymerase 	core polymerase
core region 	core region
core rnap 	core RNAP
core subunit 	core subunit
corresponding gene 	corresponding gene
corresponding region 	corresponding region
corresponding sequence 	corresponding sequence
cortex structure 	cortex structure

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discontinuous elongation 	discontinuous elongation
dissociation constant 	dissociation constant
distal gene 	distal gene
distal gene of an operon 	distal gene of an operon
distinct pathway 	distinct pathway
distinct promoter 	distinct promoter
distinct site 	distinct site
divalent cation 	divalent cation
divergent transcription 	divergent transcription
division septum 	division septum
dna-binding ability 	DNA-binding ability
dna binding activity 	DNA-binding activity
dna-binding activity 	DNA-binding activity
dna-binding affinity 	DNA-binding affinity
dna binding domain 	DNA-binding domain
dna-binding domain 	DNA-binding domain
dna binding motif 	DNA binding motif
dna-binding motif 	DNA binding motif
dna-binding property 	DNA-binding property
dna binding protein 	DNA-binding protein
dna-binding protein 	DNA-binding protein
dna binding site 	DNA-binding site
dna-binding site 	DNA-binding site
dna cellulose 	DNA-cellulose
dna cleavage 	DNA cleavage
dna complex 	DNA complex
dna curvature 	DNA curvature
dna damage 	DNA damage
dna damaging agent 	DNA-damaging agent
dna-damaging agent 	DNA-damaging agent
dna dependent rna polymerase 	DNA dependent RNA polymerase
dna-dependent rna polymerase 	DNA dependent RNA polymerase
dna-dna hybridization 	DNA-DNA hybridization

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enzymatic activity 	enzymatic activity
enzymatic characteristic 	enzymatic characteristic
enzyme activity 	enzyme activity
enzyme b-p 	enzyme B-P
enzyme inhibiter 	enzyme inhibiter
enzyme synthesis 	enzyme synthesis
epistatic interaction 	epistatic interaction
epithelial cell 	epithelial cell
erythromycin resistance gene 	erythromycin resistance gene
essential gene 	essential gene
essential gtp binding protein 	essential GTP binding protein
essential gtp-binding protein 	essential GTP binding protein
essential nutrient 	essential nutrient
essential protein 	essential protein
essential role 	essential role
establishment of cell fate 	establishment of cell fate
establishment of cell-specific gene expression 	establishment of cell-specific gene expression
establishment of cell-specific gene transcription 	establishment of cell-specific gene transcription
establishment of cell type 	establishment of cell type
establishment of compartment-specific transcription 	establishment of compartment-specific transcription
establishment of differential gene expression 	establishment of differential gene expression
ethanol production growth phase 	ethanol production growth phase

t/test/resources/terms  view on Meta::CPAN

family of transcriptional activator 	family of transcriptional activator
fat body 	fat body
fatty acid 	fatty acid
fatty acid synthase 	fatty acid synthase
feedback loop 	feedback loop
fermentation engineer 	fermentation engineer
fermentative growth 	fermentative growth
ferric-iron-reduction activity 	ferric-iron-reduction activity
ferric uptake 	ferric-uptake
ferric-uptake	ferric uptake
filter binding 	filter-binding
first codon of the gene 	first codon of the gene
first gene of the operon 	first gene of the operon
first open reading frame 	first open reading frame
first report 	first report
first stage 	first stage
first structural gene 	first structural gene
flagellar biosynthesis 	flagellar biosynthesis
flagellar filament 	flagellar filament
flagellar operon 	flagellar operon
flagellar structure 	flagellar structure

t/test/resources/terms  view on Meta::CPAN

gene code 	gene code
gene conversion 	gene conversion
gene copy number 	gene copy number
gene deletion 	gene deletion
gene disruption experiment 	gene disruption experiment
gene disruption 	gene disruption
gene-disruption	gene disruption
gene duplication 	gene duplication
gene encode alkaline shock protein 	gene encode alkaline shock protein
gene encode insecticidal crystal protein 	gene encode insecticidal crystal protein
gene encode penicillin-binding protein 	gene encode penicillin-binding protein
gene encode protein 	gene encode protein
gene encode small ribosome protein 	gene encode small ribosome protein
gene expression 	gene expression
gene-expression	gene expression
gene expression level 	gene expression level
gene expression regulation 	gene regulation
gene fusion 	gene fusion
gene identification 	gene identification
gene induction 	gene induction
gene in plant 	gene in plant

t/test/resources/terms  view on Meta::CPAN

growth phase-dependent 	growth-phase-dependent
growth phase 	growth phase
growth-phase	growth phase
growth ph 	growth pH
growth rate 	growth-rate
growth-rate	growth rate
growth rate of cell 	growth rate of cell
growth stage 	growth stage
growth temperature 	growth temperature
growth to sporulation 	growth to sporulation
gtp binding protein 	GTP-binding protein
gtp-binding protein 	GTP binding protein
gtp cyclohydrolase 	GTP cyclohydrolase
gtp starvation 	GTP starvation
guanidine hydrochloride 	guanidine hydrochloride
guanine nucleotide 	guanine nucleotide
guanine residue 	guanine residue
guanosine regulation 	guanosine regulation
h2o2 inducible 	H2O2-inducible
haem domain 	haem domain
haemolytic activity 	haemolytic activity
haem synthesis 	haem synthesis

t/test/resources/terms  view on Meta::CPAN

heat shock 	heat-shock
heat-shock	heat-shock
heat shock induction 	heat induction
heat shock protein 	heat-shock protein
heat shock regulon 	heat-shock regulon
heat shock response 	heat-shock response
heat-stable enzyme 	heat-stable enzyme
heat stress 	heat stress
heavy metal 	heavy metal
helical turn 	helical turn
helix-turn-helix dna binding motif 	helix-turn-helix DNA binding motif
helix-turn-helix dna-binding motif 	helix-turn-helix DNA binding motif
helix-turn-helix motif 	helix-turn-helix motif
heparin resistant 	heparin-resistant
heterodiploid cell 	heterodiploid cell
heterologous antigen 	heterologous antigen
heterologous expression 	heterologous expression
heterologous gene 	heterologous gene
heterologous host 	heterologous host
heterologous promoter 	heterologous promoter
heterologous protein 	heterologous protein
heterologous system 	heterologous system

t/test/resources/terms  view on Meta::CPAN

nt sequence 	nt sequence
nuclear magnetic resonance 	nuclear magnetic resonance
nuclear membrane 	nuclear membrane
nuclease activity 	nuclease activity
nuclease digestion 	nuclease digestion
nuclease protection assay 	nuclease protection assay
nuclease s1 mapping 	nuclease S1 mapping
nuclease s1 	nuclease S1
nuclease s1 protection experiment 	nuclease S1 protection experiment
nucleic acid 	nucleic acid
nucleoid binding protein 	nucleoid binding protein
nucleoid template 	nucleoid template
nucleoprotein complex 	nucleoprotein complex
nucleoside catabolism 	nucleoside catabolism
nucleoside phosphorylase 	nucleoside phosphorylase
nucleoside triphosphates 	nucleoside triphosphates
nucleotide difference 	nucleotide difference
nucleotide excision repair 	nucleotide excision repair
nucleotide identity 	nucleotide identity
nucleotide sequence analysis 	nucleotide sequence analysis
nucleotide sequence of the gene 	nucleotide sequence of the gene

t/test/resources/terms  view on Meta::CPAN

partial homology 	partial homology
partial open reading frame 	partial open reading frame
partial purine starvation 	partial purine starvation
partial relief 	partial relief
partial terminator 	partial terminator
partner-switching module 	partner-switching module
pas domain 	pas domain
pattern of gene expression 	expression pattern
pattern of protein synthesis 	pattern of protein synthesis
penicillinase gene 	penicillinase gene
penicillin-binding protein 	penicillin-binding protein
peptide antibiotic gramicidin 	peptide antibiotic gramicidin
peptide chain initiation 	peptide chain initiation
peptide code sequence 	peptide code sequence
peptide fragment 	peptide fragment
peptide structure 	peptide structure
peptide synthesis 	peptide synthesis
peptide synthetases 	peptide synthetases
peptide transport 	peptide transport
peptidoglycan synthesis 	peptidoglycan synthesis
peptidyl transferase center 	peptidyl transferase center

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post-exponential phase 	post-exponential-phase
posttranscriptional control 	posttranscriptional control
post-transcriptional level 	post-transcriptional level
posttranscriptional regulation 	posttranscriptional regulation
post-translational	post-translational
potassium chloride 	potassium chloride
potassium permanganate 	potassium permanganate
potential division site 	potential division site
potential function 	potential function
potential promoter sequence 	potential promoter sequence
potential ribosome-binding site 	potential ribosome-binding site
potential secondary structure 	potential secondary structure
potential transcription start site 	potential transcription start site
potential vegetative promoter 	potential vegetative promoter
pp2c phosphatase 	PP2C phosphatase
p protein 	p protein
preceding paper 	preceding paper
precise position 	precise position
precursor element 	precursor element
precursor processing 	precursor processing
precursor protein 	precursor protein

t/test/resources/terms  view on Meta::CPAN

primer-extension analysis 	primer extension analysis
primer extension experiment 	primer extension experiment
primer extension mapping 	primer extension mapping
primer extension 	primer-extension
primer-extension	primer-extension
primer extension study 	primer extension study
priming protein 	priming protein
primitive organism 	primitive organism
principal sigma factor 	principal sigma factor
prna activity 	pRNA activity
probable ribosome-binding site 	probable ribosome-binding site
processing enzyme 	processing enzyme
processing machinery 	processing machinery
processing of gene product 	processing of gene product
processing site 	processing site
process of endospore formation 	process of endospore formation
product function 	product function
production of alpha-amylase 	alpha-amylase production
production of beta-lactamase 	production of beta-lactamase
production of extracellular enzyme 	production of extracellular enzyme
production of staphylokinase 	production of staphylokinase
product of a gene 	gene product
product of this locus 	product of this locus
progenitor cell 	progenitor cell
progeny cell 	progeny cell
programme of gene expression 	programme of gene expression
prokaryotic gene 	prokaryotic gene
prokaryotic genome 	prokaryotic genome
prokaryotic system 	prokaryotic system
proline oxidase 	proline oxidase
promoter -10 binding region 	promoter -10 binding region
promoter activation 	promoter activation
promoter activity experiment 	promoter activity experiment
promoter clearance 	promoter clearance
promoter complex 	promoter complex
promoter consensus sequence 	promoter consensus sequence
promoter distal 	promoter-distal
promoter dna 	promoter DNA
promoter dna sequence 	promoter sequence
promoter element 	promoter element
promoter for gene 	gene promoter

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protease gene 	protease gene
protease production 	protease production
protection of the cell 	cell protection
protective antigen gene 	protective antigen gene
protective role 	protective role
proteinaceous coat 	proteinaceous coat
protein analysis 	protein analysis
protein a 	protein A
proteinase inhibiter 	proteinase inhibiter
protein-based phyletic tree 	protein-based phyletic tree
protein binding 	Protein-binding
protein-binding	Protein-binding
protein bind 	protein bind
protein biosynthesis 	protein biosynthesis
protein complex 	protein complex
protein concentration 	protein concentration
protein database 	protein database
protein denaturation 	protein denaturation
protein-dna interaction 	protein-DNA interaction
protein dna 	protein-DNA
protein domain 	protein domain
protein export pathway 	protein export pathway
protein export 	protein export

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protoplast fusion 	protoplast fusion
protoporphyrinogen oxidase 	protoporphyrinogen oxidase
protoxin gene 	protoxin gene
psi residue 	psi residue
pulse-chase experiment 	pulse-chase experiment
purification of the protein 	purification of the protein
purification procedure 	purification procedure
purine nucleotide 	purine nucleotide
purine residue 	purine residue
purine starvation 	purine starvation
putative binding site 	putative binding site
putative dd-carboxypeptidase 	putative DD-carboxypeptidase
putative dna-binding domain 	putative DNA-binding domain
putative dna 	putative DNA
putative gene 	putative gene
putative helix-turn-helix 	putative helix-turn-helix
putative integral membrane protein 	putative integral membrane protein
putative leader peptide 	putative leader peptide
putative positive factor 	putative positive factor
putative product of the gene 	putative product of the gene
putative promoter region 	putative promoter region
putative promoter sequence 	putative promoter sequence
putative protein 	putative protein
putative regulator protein 	putative regulator protein
putative ribosomal binding site 	putative ribosomal binding site
putative ribosome-binding site 	putative ribosome-binding site
putative ribosome 	putative ribosome
putative sigma factor 	putative sigma factor
putative termination site 	putative termination site
putative terminator 	putative terminator
putative transcriptional terminator 	putative terminator
pyrimidine biosynthesis 	pyrimidine biosynthesis
pyrimidine nucleoside 	pyrimidine nucleoside
pyrimidine nucleotide biosynthesis 	pyrimidine biosynthesis
pyrimidine nucleotide 	pyrimidine nucleotide
pyruvate kinase 	pyruvate kinase

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rho gene 	rho gene
rho-independent terminator of transcription 	rho-independent terminator of transcription
rho-independent transcription termination signal 	rho-independent transcription termination signal
rho-independent transcription terminator 	rho-independent transcription terminator
riboflavin biosynthesis 	riboflavin biosynthesis
riboflavin synthase 	riboflavin synthase
ribonuclease activity 	ribonuclease activity
ribonucleic acid 	ribonucleic acid
ribonucleoprotein enzyme 	ribonucleoprotein enzyme
ribose utilization 	ribose utilization
ribosomal binding site 	ribosomal binding site
ribosomal gene 	ribosomal gene
ribosomal promoter 	ribosomal promoter
ribosomal protein 	ribosomal protein
ribosomal subunit 	ribosomal subunit
ribosome binding 	ribosome-binding
ribosome binding site 	ribosome-binding site
ribosome-binding site 	ribosome binding site
ribosome function 	ribosome function
ribosome isolation 	ribosome isolation
rich medium 	rich medium
rifampicin resistance 	rifampicin resistance
rifampicin resistant 	rifampicin-resistant
rifamycin treatment 	rifamycin treatment
rna binding domain 	RNA-binding domain
rna-binding domain 	RNA-binding domain
rna binding protein 	RNA-binding protein
rna-binding protein 	RNA-binding protein
rna polymerase 	RNA-polymerase
rnase protection experiment 	RNase protection experiment
role of plasmids 	role of plasmids
rolling-circle replicon 	rolling-circle replicon
rotational orientation 	rotational orientation
rotational symmetry 	rotational symmetry
rrna promoter 	rRNA promoter
rrna sequence 	rRNA sequence
rrna-trna operon 	rRNA-tRNA operon
run off 	run-off

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sequence from the promoter 	promoter sequence
sequence homology 	sequence homology
sequence identity 	sequence identity
sequence of a gene 	gene sequence
sequence of the gene 	gene sequence
sequence of the nucleotide 	nucleotide sequence
sequence of the promoter 	promoter sequence
sequence of this region 	sequence of this region
sequence similarity 	sequence similarity
sequence-specific contact 	sequence-specific contact
sequence-specific dna-binding protein 	sequence-specific DNA-binding protein
sequence within an inverted repeat 	sequence within an inverted repeat
sequence within a non-coding leader 	sequence within a non-coding leader
sequential cleavage 	sequential cleavage
series of gag 	series of gag
series of shuttle vector 	series of shuttle vector
serine acetyl-transferase 	serine acetyl-transferase
serine acetyltransferase 	serine acetyltransferase
serine kinase 	serine kinase
serine phosphatase 	serine phosphatase
serine protease 	serine protease

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site of crosslinks 	site of crosslinks
site of distortion 	site of distortion
site of transcription initiation 	site of transcription initiation
site-specific mutation 	site-specific mutation
site-specific recombinase 	site-specific recombinase
site-specific recombination 	site-specific recombination
site-specific	site-specific
size of the mrnas 	size of the mRNAs
size of the subpopulation 	size of the subpopulation
skin element 	skin element
small dna-binding protein 	small DNA-binding protein
small dna segment 	small DNA segment
small domain of protein 	small domain of protein
small gene 	small gene
small group of protein 	small group of protein
small intestine 	small intestine
small protein 	small protein
sodium dodecyl sulfate-polyacrylamide gel electrophoresis 	sodium dodecyl sulfate-polyacrylamide gel electrophoresis
sodium dodecyl sulfate-polyacrylamide gel 	sodium dodecyl sulfate-polyacrylamide gel
soil bacterium 	soil bacterium
sole carbon source 	sole carbon source

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southern hybridization study 	Southern hybridization study
space group 	space group
spacer nucleotide 	spacer nucleotide
spacer region 	spacer region
spatial control 	spatial control
spatial gene activation 	spatial gene activation
specialized transducing phage 	specialized transducing phage
species specificity 	species specificity
specific affinity 	specific affinity
specific base 	specific base
specific binding site 	specific binding site
specific dna site 	specific DNA site
specific effect 	specific effect
specific function 	specific function
specificity factor 	specificity factor
specificity for promoter 	promoter specificity
specificity of interaction 	specificity of interaction
specificity of promoter recognition 	specificity of promoter recognition
specific mrna 	specific mRNA
specific protection 	specific protection
specific recognition 	specific recognition

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striking similarity 	striking similarity
stringent factor 	stringent factor
stringent response 	stringent response
strong affinity 	strong affinity
strong bias 	strong bias
strong evidence 	strong evidence
strong homology 	strong homology
strong inhibition 	strong inhibition
strong peptide sequence identity 	strong peptide sequence identity
strong promoter 	strong promoter
strong ribosome-binding site 	strong ribosome-binding site
strong similarity 	strong similarity
structural analysis 	structural analysis
structural component of the protein 	structural component of the protein
structural conservation 	structural conservation
structural element 	structural element
structural feature 	structural feature
structural gene 	structural gene
structural homology 	structural homology
structural model 	structural model
structural plasmid instability 	structural plasmid instability
structural protein 	structural protein
structural similarity 	structural similarity
structural stability 	structural stability
structure-activity relationship 	structure-activity relationship
structure-function relationship 	structure-function relationship
structure function 	structure-function
structure of the promoter 	promoter structure
structure of the terminator 	terminator structure
study of gene expression 	expression study
subcellular localization 	subcellular localization
substrate-binding domain 	substrate-binding domain
substrate-level phosphorylation 	substrate-level phosphorylation
substrate recognition 	substrate recognition
substrate specificity 	substrate specificity
subtilisin gene 	subtilisin gene
subtilisin synthesis 	subtilisin synthesis
subunit composition 	subunit composition
subunit of glutamate synthase 	subunit of glutamate synthase
succinate dehydrogenase 	succinate dehydrogenase
sucrose concentration 	sucrose concentration
sugar kinase 	sugar kinase