view release on metacpan or  search on metacpan

test/seqs_2profile_out_clustal.fasta  view on Meta::CPAN

>sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=
-----------------------------------------------------------M
RAIIIGIGQCGTKIADIF----------SLVD--------FEALAINTSKSDLEYLKHIP
PERRILVGESIVGGKGVNANPLLGREAMKRDLPMVMKKISSLVGYEDVDIFFLTFGFGGG
TGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSR-IVDSIIAID
NNKLKESDED--ISQAYEKINYAIVERIASLLALIDVP-----GEQTLDASDLKFVLRAM
GSFATVGYAKADATKIKS------LS---------------------RLIIRSFENEGLY
LDVNLE--SALYGLVAIHGPPEVLKAKEIFDALSELSQRIRGKQ----IFRGFYPD-PRE
REVEVVTLLSGIYESKSIENIVITAKRYAREFMKAKE--EGEMKKR--ELLKGLPDFEDI
YPGEVDEG---------------
>sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
-----------------------------------------------------------M
RAIIIGIGQCGTKIADIF----------SLVD--------FEALAINTSRGDLEYLKHIP
PDRRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKISSLVGFEDVDIFFLTFGFGGG
TGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-IVDSIIAID
NNKLKESNED--ISQAYERINYAIVERIASLLALIDVP-----GEQTLDASDLKFVLRAM
GSFATVGYAKADATKIKS------LS---------------------RLIIRSFENEGLY
LDVNIE--SALYGLVAIHGPPEALKANEIFEALNELTQRIRGKQ----IFRGFYPD-PRE
REVEVVTLLSGIYESKSIEEIVITAKKYAQEFLKAKE--EGESKKK--KLLSGLPDFDDI
YPGEADDQS--------------
>sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1
-----------------------------------------------------------M
RALIIGVGQCGTKIADLF----------ALVD--------FDTIALNTSRGDLEYLKHIP
HDRRILIGESITGGKGVNANPLLGREAMKRDLPLVMRKIGSIVGYEDVDIFFLTFGFGGG
TGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-VADSIIAID
NNKLKESGDD--ISSAYEKINYTIVERIASLLALVDVP-----GEQTLDASDLKFVLKAF
GSFATVGYAKADASKVKN------LS---------------------RLIIKSFESEGLY
LDANIE--SALYGLVAIHGPPEVLKASDIFEALDYLTSKIRGKQ----IFRGFYPD-PRE
RDVEVVTLLSGIYESKSIENIVRTAKEYARSFMQAKS--EAETKKK--ELLTGLPDFDDV
YPSLEATGSDDPEGFAEYREVSR
>sp|Q57816|FTSZ1_METJA Cell division protein FtsZ 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 
---MKFLKNVLEEGSKLEEFN-------------------ELELSPEDKELLEYLQQTKA
KITVVGCGGAGNNTITRLKMEGIEGAK---------------TVAINT---DAQQLIRTK
ADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQ------DSDMVFITCGLGGG
TGTGSAPVVAEISKKIG--ALTVAVVTLPFVMEGKVRMKNAMEGLERLKQ-HTDTLVVIP
NEKLFEIVPNMPLKLAFKVADEVLINAVKGLVELITKD-----GLINVDFADVKAVMNN-
GGLAMIGIGESDSEKRAKE-------------------------------AVSMALNSPL
LDVDID--GATGALIHVMGPEDLT----LEEAREVVATVSSRLDPNATIIWGATIDENLE
NTVRVLLVITGVQS-RIEFTDTGLKRKKLEL--------TGIPKI---------------
-----------------------
>sp|Q48327|FTSZ1_HALVD Cell division protein FtsZ 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1
--MDSIVGDAIDEA--EAEDMGDE------SAQVDGAANINRSGTMTDDELKAVLKDLQT
NITVVGCGGAGGNTVNRMHEEGIKGAK---------------LVAANT---DVQHLVEIG
ADTKILMGEQKTQGRGAGSLPQVGEEAALESQEEIYDAIE------GSDMVFVTAGLGGG
TGTGSAPVVAKAARESG--ALTIAIVTTPFTAEGEVRRTNAEAGLERLRD-VSDTVIVVP
NDRLLDAVGKLPVRQAFKVSDEVLMRSVKGITELITKP-----GLVNLDFADVKTVMER-
GGVAMIGLGESDSESKAQE-------------------------------SVKSALRSPL
LDVDIS--GANSALVNVTGGSDMS----IEEAEGVVEEIYDRIDPDARIIWGTSVDDELE
GMMRTMIVVTGVES-PQIYGRNGEAQAH---------------------AEERLEDIDYV
E----------------------
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVERVSAEEQKP----------------QEIQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAK---------------IIAVNT---DAQDLLKIK
AHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALE------GADMVFVTCGLGGG
TGTGAAPVIAEMAKKMG--ALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-ASDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKP-----GLVNLDFNDVRAVMKD-
GGVAMIGIGESDSEKRALE-------------------------------AAEQALNSPL
LDVDIS--GAKGALISISGA-DVK----LEEAQQIIEYVTRNVDPKAQVIWGIQLEPELE
KTIRVMVIVTGVTS-RYITFQEET-PEPSEEE--VPPVKIDIPEL---------------
-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1
MFMKSIVEEALARAEREKKERIEGR-----------------GFEDVEDEILQVLHELKT
VIKVIGVGGGGCNTITRMYEEGIEGAE---------------LIALNT---DVQHLYYTK
ANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVE------GSDMVFVTCGLGGG
TGTGAAPVVAEAAQEAG--ALTIAVVTFPFSAEGAVRRANAEAGLERLRE-VADTVIVIP
NDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITKP-----ALINLDFADVRTVMEK-
GGVAMIGLGEASGEDKAAE-------------------------------SVRKALKSPL
LDVDVS--GAKAALVNVTGGPDMT----IEEAESVIEEIYSKVDPDARIIWGAMIDPELE
NTMRTLIIVTGVKS-PQILGRKGYPVTRKY-------------------------GIDFV
R----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
--MDSIVQDAIDEAEESEDSASEP------ADVAGGGGDTVPTGTMTDNELEDVLQELQT
NITVVGCGGAGSNTVDRMATEGIHGAD---------------LVAANT---DVQHLVDIE
ADTKILMGQQKTKGRGAGSLPQVGEEAAIESQGEIRDSIA------GSDMVFVTAGLGGG
TGTGSAPVVAKAAREQG--ALTIAIVTTPFTAEGEVRRTNAEAGLERLRD-VADTVIVVP
NDRLLDSVGKLPVREAFKVSDEVLMRSVKGITELITKP-----GLVNLDFADVRTVMEK-
GGVAMIGLGEADSDAKAAD-------------------------------SVQSALRSPL
LDVDIS--SANSALVNVTGGPGMS----IEEAEGVVEQLYDRIDPDARIIWGTSIDEQIQ
EEMRTMVVVTGVDS-PQIYGRNEAAEGDGPAQESTP-----EPEPEP-QAGSEIEDIDYV
E----------------------
>sp|Q8TZK3|FTSZ1_PYRFU Cell division protein FtsZ 1 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVGRVSEEENKV----------------PEVQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAK---------------IIAVNT---DAQDLLKVK
AHQKILIGKELTRGLGAGNDPKIGEEAAKESERELRDALE------GADMVFITCGLGGG
TGTGAAPVIAEIARKMG--ALTVSVVTLPFTMEGIRRAKNAEYGLKRLVK-YSDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKP-----GLVNLDFNDVRAVMKD-
GGVAMIGIGESDSEKRALE-------------------------------AAEQALNSPL
LDVDIS--GATGALIHISGA-DVK----LEEAQQIIEYVTRNVDPKAQVIWGIQLEPELE
KTIRVMVVITGVTS-RYITPEEET-PLETPEE--SPSIEISIPEL---------------
-----------------------
>sp|O57776|FTSZ1_PYRHO Cell division protein FtsZ 1 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ftsZ1
--MLKLVENVVERVSSEETKV----------------QEVQVPQSSIDEELKKIVEQIKA
RIHVVGVGGAGCNTVNRMMEVGVTGAK---------------IIAVNT---DAQDLLKVK
AHQKILIGKEITRGLGAGNDPKIGEEAAKESEREIREALE------GADMVFVTCGLGGG
TGTGAAPVIAEMARKMG--ALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-ASDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKP-----GLVNLDFNDVRAVMKD-
GGVAMIGIGESDSEKRALE-------------------------------AAEQALNSPL
LDVDIS--GAKGALISISGA-DVK----LEEAQQIIEYVTRNVDPKAQVIWGIQLEPELE
KTIRVMVIVTGITS-RYVTFQEET-PAPSEEE--TTPVKIDIPEL---------------
-----------------------
>sp|Q52630|FTSZ1_PYRWO Cell division protein FtsZ 1 OS=Pyrococcus woesei GN=ftsZ1 PE=3 SV=1
--------MSLEESPKRKIRC----------------PEVQVPQSNIDEELEKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAK---------------IIAVNT---DAQDLLKVK
AHQKILIGKELTRGLGAGNDPKIGEEAAKESERELRDALE------GADMVFITCGLGGG
TGTGAAPVIAEIARKMG--ELTVSVVTLPFTMEGIRRAKNAEYGLKRLVK-YSDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKP-----GLVNLDFNDVRAVMKD-
RGVAMIGIGESDSEKRALE-------------------------------AAEQALNSPL
LDVDIS--GASGALIHISGA-DVK----LEEAQQIIEYVTRNVDSKAQVIWGIQLEPELE
KTIRVMVVITGVTS-RYITPEEET-PLETPEE--SPSIEISIPEL---------------
-----------------------
>sp|Q5JH31|FTSZ1_THEKO Cell division protein FtsZ 1 OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=ftsZ1 PE=3 SV=1
--MLKLIEDAIERTSAAPQAS----------------APEVRTQSDIDEELKKLLEQIQA
KIYVVGVGGAGCNTINRMMQVGIQGAK---------------IIAMNT---DAQDLLKVR
AHKKILLGKELTRGLGAGNNPKIGEEAAKESEREIREALE------GADMVFITCGLGGG
TGTGAAPVVAEIAKKMG--ALTVAVVTLPFTVEGIRRIKNAEYGLERLKK-NTDTVIVIP
NDKLMEVAPNLPIHMAFKVADEILVQAVKGITELITKP-----GLVNLDFNDVRAVMKD-
GGVAMIGIGESDSEKRALE-------------------------------AAQQALNSPL
LDVDIS--GAKGALISISGS-DVK----LEEAQQIIELVTSKLDPEAQVIWGIQLDEELG
KMIRILLVVTGVSS-PYSVAEEEEESYFGEEE--RRPIKLDLDEL---------------
-----------------------
>tr|L9UND3|L9UND3_HALVD Cell division protein FtsZ OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-176