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doc/doc.latex  view on Meta::CPAN

$if(verbatim-in-note)$
\VerbatimFootnotes % allow verbatim text in footnotes
$endif$
$if(geometry)$
$if(beamer)$
\geometry{$for(geometry)$$geometry$$sep$,$endfor$}
$else$
\usepackage[$for(geometry)$$geometry$$sep$,$endfor$]{geometry}
$endif$
$endif$
$if(beamer)$

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docs/HOWTO-MySQL.html  view on Meta::CPAN

<o:p></o:p></span></p>

<p class=MsoPlainText style='margin-left:.5in'><span style='font-family:Courier;
mso-fareast-font-family:"MS Mincho";mso-bidi-font-family:Arial'>Welcome to the
MySQL monitor.<span style="mso-spacerun: yes">  </span>Commands end with ; or
\g.<o:p></o:p></span></p>

<p class=MsoPlainText style='margin-left:.5in'><span style='font-family:Courier;
mso-fareast-font-family:"MS Mincho";mso-bidi-font-family:Arial'>Your MySQL
connection id is 8 to server version: 3.23.41-log<o:p></o:p></span></p>

docs/HOWTO-MySQL.html  view on Meta::CPAN

<o:p></o:p></span></p>

<p class=MsoPlainText style='margin-left:.5in'><span style='font-family:Courier;
mso-fareast-font-family:"MS Mincho";mso-bidi-font-family:Arial'>Welcome to the
MySQL monitor.<span style="mso-spacerun: yes">  </span>Commands end with ; or
\g.<o:p></o:p></span></p>

<p class=MsoPlainText style='margin-left:.5in'><span style='font-family:Courier;
mso-fareast-font-family:"MS Mincho";mso-bidi-font-family:Arial'>Your MySQL
connection id is 9 to server version: 3.23.41-log<o:p></o:p></span></p>

docs/HOWTO-MySQL.html  view on Meta::CPAN

<o:p></o:p></span></p>

<p class=MsoPlainText style='margin-left:1.0in'><span style='font-family:Courier;
mso-fareast-font-family:"MS Mincho";mso-bidi-font-family:Arial'>Welcome to the
MySQL monitor.<span style="mso-spacerun: yes">  </span>Commands end with ; or
\g.<o:p></o:p></span></p>

<p class=MsoPlainText style='margin-left:1.0in'><span style='font-family:Courier;
mso-fareast-font-family:"MS Mincho";mso-bidi-font-family:Arial'>Your MySQL
connection id is 11 to server version: 3.23.41-log<o:p></o:p></span></p>

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Bioinf.pl  view on Meta::CPAN

				for($i=0; $i < @stringDSSP; $i++){
					if($stringDSSP[$i] =~ /\W/){ $seq_positionSTR[$i]= $gap_char;}
				}
			}
		}elsif( $comm_col =~ /C/i){
				print __LINE__, " Replacing position with \gap_char \"$gap_char\"\n" if $debug2 eq 1;
				$ss_opt = 'ss'; # whether it was set or not, make it 'ss'
				for($i=0; $i < @stringDSSP_common; $i++){
					if($stringDSSP_common[$i] =~ /\W/){ $seq_positionSTR[$i]= $gap_char;}
				}
		}

Bioinf.pl  view on Meta::CPAN

         for($i=0; $i< @file; $i++){
              if($file[$i]=~/\S+\.msp *$/){ $big_msp_out_file=$file[$i]; splice (@file, $i, 1); $i--;
              #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
              # Opening zipped file
              #_______________________________________________
              }elsif($file[$i]=~/\S+\.\gz$/ or -B $file[$i]){  ## if file has xxxx.gz extension
                  my (@sso);
                  @sso=`gunzip -c $file[$i]`;
                  if(@sso < 30){  @sso=`zcat $file[$i]`; }      # if zcat fails to produce output use gunzip -c
                  if(@sso > 3000){ # if @sso is very big, I remove the useless contents
                      print "\n# open_sso_files: size of \@sso for $file[$i] exceeds 3000 lines, ", scalar(@sso), " !!! \n";

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src/boost/random/variate_generator.hpp  view on Meta::CPAN

///\endcond

/**
 * A random variate generator is used to join a random number
 * generator together with a random number distribution.
 * Boost.Random provides a vast choice of \generators as well
 * as \distributions.
 *
 * The argument for the template parameter Engine shall be of
 * the form U, U&, or U*, where U models a
 * \uniform_random_number_generator.  Then, the member

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lib/Biblio/bp/lib/bp-cs-tex.pl  view on Meta::CPAN

'00B6', '\P ',
'00B7', '$\cdot$',
'00B8', '{\c{ }}',
'00B9', '${}^1$',
'00BA', '${}^{\b{\scriptsize o}}$',
'00BB', '$\scriptscriptstyle\gg$',
'00BC', '$1\over4$',
'00BD', '$1\over2$',
'00BE', '$3\over4$',
'00BF', '?`',
'00C0', '{\`A}',

lib/Biblio/bp/lib/bp-cs-tex.pl  view on Meta::CPAN

# XXXXX
# Should these be surrounded by $ (math mode)?
# Also, what to do with \mu, which is listed twice?
'03B1', '\alpha',
'03B2', '\beta',
'03B3', '\gamma',
'03B4', '\delta',
'03B5', '\epsilon',
'03B6', '\zeta',
'03B7', '\eta',
'03B8', '\theta',