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test/GNTPAN12210.ali view on Meta::CPAN
232425262728293031323334353637383940414243>Gallus gallus
@ENSGALP00000005317
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCSHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Taeniopygia guttata
@ENSTGUP00000002617
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCGHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Anolis carolinensis
@ENSACAP00000017686
LSM*******
*RSGIHAPTPPRRVLGIMAEPEVSLQTSARTPQAAASSAATASSVTAPPA
******
*SSGGGSGGSSST
******
*SSSDPVRPGLSQQQ
*
*RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN
****
*P
*PTAPRMDLQQTVTNLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Protopterus annectens
@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens
@comp301579_c0_seq1
*****************************************
*MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTG
*****
*SGSSDPARPGLSQQQ
*
*RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN
****
*P
*ATAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSDDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Latimeria chalumnae
@ENSLACP00000012334
***********
*RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPR
****
*AGGSSLNNGPNPGPSGGAGS
******
*SGGSDPARPGLSQQQ
*
*RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PTAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKSILQMSRPVVEGSL
...
>Danio rerio
@ENSDARP00000011795
MAD***************************************
*PAAQSSAQPRLQQAQSSGPTGSNSNPGA
**************
*GSSDPARPGLSQQQ
*
*WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN
****
*P
*PTAARMELQQQAASLTETCRSCGHSLA
*EHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Oreochromis niloticus
@ENSONIP00000001395
MSD****************************************
*PAAQALQPRLLQAQSAGSASSSTTTTAGSGS
**********
*GNSDPVRPGLSQQQ
*
*RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PSATRIDLQQQAASLSEPCRSCGHALA
*NHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Homo sapiens
@ENSP00000263754
************************
*MSEAGGAGPGGCGAGAGAGAGPGALPPQPAALPPAPPQGSPC
*
*AAAAGGSGACGPATAVAAAGTAEGPGGGGSA
*
*RIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN
****
*PSPTPPRADLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Mus musculus
@ENSMUSP00000000724
************************
*MAEAGGAG
*******************
*SPALPPAPPHGSPRTLATAAGSSASCGPATAVAAAGTAEGPGGGGSA
*
*RIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN
****
*PSPTPPRGDLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMDRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Canis familiaris
@ENSCAFP00000008685
test/GNTPAN12210.ali view on Meta::CPAN
57585960616263646566676869707172>Meleagris gallopavo
@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus
@ENSGALP00000018380
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Meleagris gallopavo
@ENSMGAP00000011414
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Taeniopygia guttata
@ENSTGUP00000003370
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRAELQQAAASLAEPCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Xenopus tropicalis
@ENSXETP00000030583
************************
*MVCVAGSG
***********************
*SSALPQGSPAIVASAASGAARG
*****
*AESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN
****
*PPPTPPKMDLQQTVVSLAEPCRSCGHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDIEYLFTCV
**
*HKEEDADTKQVY
*FCLFKLLRKCILQMVKPAVEGSL
...
>Latimeria chalumnae
@ENSLACP00000007242
************************
*MSE
****************************
*GGGVQQGSPAP
**********
*GSAGSVPAGGADGSGSAAGSA
*
*RIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN
****
*PPPTPPRVDLQQTVGSLTEPCRSCSHTLA
*DHVSH
*LENVLEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPAVEGSL
...
>Danio rerio
@ENSDARP00000085190
************************
*MSE
****************************
*STGIPQGSPAVGAAGSAPAAPG
******
*VGGTECSGAAVGSA
*
*RIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE
*QPTAVSLMEPCRSCSHALG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCV
**
*HKEEDPDTKQVY
*FSLFKLLRKCILQMGRPVVE
*AL
...
>Oreochromis niloticus
@ENSONIP00000003026
************************
*MAD
****************************
*SAGIQQGSPAIGAAGLVPAAPG
******
*AGGTEGSGAARGSA
*
*RIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN
****
*PPPTPPQTEQQSNAVNLQEPCRSCSHTLG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCI
**
*HKEEDADTKQVY
*FSLFKLLRKSILQMGKPMLEAQ
*...
test/GNTPAN12210_hmm.ali view on Meta::CPAN
232425262728293031323334353637383940414243>Gallus gallus
@ENSGALP00000005317
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCSHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Taeniopygia guttata
@ENSTGUP00000002617
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCGHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Anolis carolinensis
@ENSACAP00000017686
DPVRPGLSQQQ*
*RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN
****
*P
*PTAPRMDLQQTVTNLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Protopterus annectens
@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens
@comp301579_c0_seq1
DPARPGLSQQQ*
*RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN
****
*P
*ATAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSDDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Latimeria chalumnae
@ENSLACP00000012334
GSDPARPGLSQQQ*
*RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PTAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKSILQMSRPVVEGSL
...
>Danio rerio
@ENSDARP00000011795
DPARPGLSQQQ*
*WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN
****
*P
*PTAARMELQQQAASLTETCRSCGHSLA
*EHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Oreochromis niloticus
@ENSONIP00000001395
AGSGS**********
*GNSDPVRPGLSQQQ
*
*RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PSATRIDLQQQAASLSEPCRSCGHALA
*NHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Homo sapiens
@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRADLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Mus musculus
@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRGDLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMDRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Canis familiaris
@ENSCAFP00000008685
test/GNTPAN12210_hmm.ali view on Meta::CPAN
57585960616263646566676869707172>Meleagris gallopavo
@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus
@ENSGALP00000018380
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Meleagris gallopavo
@ENSMGAP00000011414
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Taeniopygia guttata
@ENSTGUP00000003370
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRAELQQAAASLAEPCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Xenopus tropicalis
@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN****
*PPPTPPKMDLQQTVVSLAEPCRSCGHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDIEYLFTCV
**
*HKEEDADTKQVY
*FCLFKLLRKCILQMVKPAVEGSL
...
>Latimeria chalumnae
@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN****
*PPPTPPRVDLQQTVGSLTEPCRSCSHTLA
*DHVSH
*LENVLEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPAVEGSL
...
>Danio rerio
@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE
*QPTAVSLMEPCRSCSHALG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCV
**
*HKEEDPDTKQVY
*FSLFKLLRKCILQMGRPVVE
*AL
...
>Oreochromis niloticus
@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN****
*PPPTPPQTEQQSNAVNLQEPCRSCSHTLG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCI
**
*HKEEDADTKQVY
*FSLFKLLRKSILQMGKPMLEAQ
*...
test/GNTPAN12210_hmm.log view on Meta::CPAN
262728293031323334353637383940414243444546Taeniopygia guttata
@ENSTGUP00000002617
698-730
Anolis carolinensis
@ENSACAP00000017686
1-89
443-529
Protopterus annectens
@comp246593_c0_seq1
Protopterus annectens
@comp301579_c0_seq1
43-89
438-495
577-732
Latimeria chalumnae
@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio
@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus
@ENSONIP00000001395
1-70
Homo sapiens
@ENSP00000263754
test/GNTPAN12210_hmm.log view on Meta::CPAN
60616263646566676869707172737475767778Anolis carolinensis
@ENSACAP00000000014
425-446
Meleagris gallopavo
@ENSMGAP00000011451
Gallus gallus
@ENSGALP00000018380
Meleagris gallopavo
@ENSMGAP00000011414
Taeniopygia guttata
@ENSTGUP00000003370
425-446
Xenopus tropicalis
@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae
@ENSLACP00000007242
26-107
425-446
Danio rerio
@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus
@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm.score view on Meta::CPAN
515253545556575859606162636465666768697071
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens
@comp246593_c0_seq1
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens
@comp301579_c0_seq1
MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk
q ra+prakkleklgvfsackanesckcngwknpnp
taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae
@ENSLACP00000012334
RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio
@ENSDARP00000011795
MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus
@ENSONIP00000001395
MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm.score view on Meta::CPAN
119120121122123124125126127128129130131132133134135136137138139
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata
@ENSTGUP00000003370
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis
@ENSXETP00000030583
MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k
q+r+
+prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae
@ENSLACP00000007242
MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio
@ENSDARP00000085190
MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++
q +a+sl+epcrscshal
dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus
@ENSONIP00000003026
MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++
q +a++l+epcrscsh+l
dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_X.ali view on Meta::CPAN
232425262728293031323334353637383940414243>Gallus gallus
@ENSGALP00000005317
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCSHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Taeniopygia guttata
@ENSTGUP00000002617
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCGHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Anolis carolinensis
@ENSACAP00000017686
DPVRPGLSQQQ*
*RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN
****
*P
*PTAPRMDLQQTVTNLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Protopterus annectens
@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens
@comp301579_c0_seq1
DPARPGLSQQQ*
*RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN
****
*P
*ATAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSDDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Latimeria chalumnae
@ENSLACP00000012334
GSDPARPGLSQQQ*
*RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PTAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKSILQMSRPVVEGSL
...
>Danio rerio
@ENSDARP00000011795
DPARPGLSQQQ*
*WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN
****
*P
*PTAARMELQQQAASLTETCRSCGHSLA
*EHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Oreochromis niloticus
@ENSONIP00000001395
AGSGS**********
*GNSDPVRPGLSQQQ
*
*RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PSATRIDLQQQAASLSEPCRSCGHALA
*NHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Homo sapiens
@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRADLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Mus musculus
@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRGDLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMDRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Canis familiaris
@ENSCAFP00000008685
test/GNTPAN12210_hmm_X.ali view on Meta::CPAN
57585960616263646566676869707172>Meleagris gallopavo
@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus
@ENSGALP00000018380
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Meleagris gallopavo
@ENSMGAP00000011414
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Taeniopygia guttata
@ENSTGUP00000003370
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRAELQQAAASLAEPCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Xenopus tropicalis
@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN****
*PPPTPPKMDLQQTVVSLAEPCRSCGHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDIEYLFTCV
**
*HKEEDADTKQVY
*FCLFKLLRKCILQMVKPAVEGSL
...
>Latimeria chalumnae
@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN****
*PPPTPPRVDLQQTVGSLTEPCRSCSHTLA
*DHVSH
*LENVLEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPAVEGSL
...
>Danio rerio
@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE
*QPTAVSLMEPCRSCSHALG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCV
**
*HKEEDPDTKQVY
*FSLFKLLRKCILQMGRPVVE
*AL
...
>Oreochromis niloticus
@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN****
*PPPTPPQTEQQSNAVNLQEPCRSCSHTLG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCI
**
*HKEEDADTKQVY
*FSLFKLLRKSILQMGKPMLEAQ
*...
test/GNTPAN12210_hmm_X.log view on Meta::CPAN
272829303132333435363738394041424344454647Taeniopygia guttata
@ENSTGUP00000002617
698-730
Anolis carolinensis
@ENSACAP00000017686
1-89
443-529
Protopterus annectens
@comp246593_c0_seq1
Protopterus annectens
@comp301579_c0_seq1
43-89
438-495
577-732
Latimeria chalumnae
@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio
@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus
@ENSONIP00000001395
1-70
Homo sapiens
@ENSP00000263754
test/GNTPAN12210_hmm_X.log view on Meta::CPAN
68697071727374757677787980818283848586Anolis carolinensis
@ENSACAP00000000014
425-446
Meleagris gallopavo
@ENSMGAP00000011451
Gallus gallus
@ENSGALP00000018380
Meleagris gallopavo
@ENSMGAP00000011414
Taeniopygia guttata
@ENSTGUP00000003370
425-446
Xenopus tropicalis
@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae
@ENSLACP00000007242
26-107
425-446
Danio rerio
@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus
@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm_X.score view on Meta::CPAN
515253545556575859606162636465666768697071
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens
@comp246593_c0_seq1
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens
@comp301579_c0_seq1
MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk
q ra+prakkleklgvfsackanesckcngwknpnp
taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae
@ENSLACP00000012334
RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio
@ENSDARP00000011795
MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus
@ENSONIP00000001395
MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_X.score view on Meta::CPAN
119120121122123124125126127128129130131132133134135136137138139
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata
@ENSTGUP00000003370
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis
@ENSXETP00000030583
MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k
q+r+
+prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae
@ENSLACP00000007242
MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio
@ENSDARP00000085190
MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++
q +a+sl+epcrscshal
dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus
@ENSONIP00000003026
MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++
q +a++l+epcrscsh+l
dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_changeCost.ali view on Meta::CPAN
232425262728293031323334353637383940414243>Gallus gallus
@ENSGALP00000005317
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCSHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Taeniopygia guttata
@ENSTGUP00000002617
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCGHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Anolis carolinensis
@ENSACAP00000017686
RPGLSQQQ*
*RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN
****
*P
*PTAPRMDLQQTVTNLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Protopterus annectens
@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens
@comp301579_c0_seq1
DPARPGLSQQQ*
*RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN
****
*P
*ATAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSDDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Latimeria chalumnae
@ENSLACP00000012334
GSDPARPGLSQQQ*
*RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PTAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKSILQMSRPVVEGSL
...
>Danio rerio
@ENSDARP00000011795
DPARPGLSQQQ*
*WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN
****
*P
*PTAARMELQQQAASLTETCRSCGHSLA
*EHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Oreochromis niloticus
@ENSONIP00000001395
AGSGS**********
*GNSDPVRPGLSQQQ
*
*RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PSATRIDLQQQAASLSEPCRSCGHALA
*NHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Homo sapiens
@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRADLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Mus musculus
@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRGDLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMDRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Canis familiaris
@ENSCAFP00000008685
test/GNTPAN12210_hmm_changeCost.ali view on Meta::CPAN
57585960616263646566676869707172>Meleagris gallopavo
@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus
@ENSGALP00000018380
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Meleagris gallopavo
@ENSMGAP00000011414
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Taeniopygia guttata
@ENSTGUP00000003370
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRAELQQAAASLAEPCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Xenopus tropicalis
@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN****
*PPPTPPKMDLQQTVVSLAEPCRSCGHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDIEYLFTCV
**
*HKEEDADTKQVY
*FCLFKLLRKCILQMVKPAVEGSL
...
>Latimeria chalumnae
@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN****
*PPPTPPRVDLQQTVGSLTEPCRSCSHTLA
*DHVSH
*LENVLEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPAVEGSL
...
>Danio rerio
@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWK PTPPRAE
*QPTAVSLMEPCRSCSHALG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCV
**
*HKEEDPDTKQVY
*FSLFKLLRKCILQMGRPVVE
*AL
...
>Oreochromis niloticus
@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN****
*PPPTPPQTEQQSNAVNLQEPCRSCSHTLG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCI
**
*HKEEDADTKQVY
*FSLFKLLRKSILQMGKPMLEAQ
*...
test/GNTPAN12210_hmm_changeCost.log view on Meta::CPAN
293031323334353637383940414243444546474849
451-531
691-730
Anolis carolinensis
@ENSACAP00000017686
1-92
443-529
Protopterus annectens
@comp246593_c0_seq1
Protopterus annectens
@comp301579_c0_seq1
43-89
424-473
577-732
Latimeria chalumnae
@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio
@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus
@ENSONIP00000001395
1-70
Homo sapiens
@ENSP00000263754
test/GNTPAN12210_hmm_changeCost.log view on Meta::CPAN
7778798081828384858687888990919293949596Meleagris gallopavo
@ENSMGAP00000011451
Gallus gallus
@ENSGALP00000018380
425-433
Meleagris gallopavo
@ENSMGAP00000011414
425-433
Taeniopygia guttata
@ENSTGUP00000003370
425-446
Xenopus tropicalis
@ENSXETP00000030583
26-109
408-541
Latimeria chalumnae
@ENSLACP00000007242
26-107
412-446
Danio rerio
@ENSDARP00000085190
26-107
142-151
408-455
Oreochromis niloticus
@ENSONIP00000003026
26-107
412-465
test/GNTPAN12210_hmm_changeCost.score view on Meta::CPAN
515253545556575859606162636465666768697071
RPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens
@comp246593_c0_seq1
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens
@comp301579_c0_seq1
MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk
q ra+prakkleklgvfsackanesckcngwknpnp
taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae
@ENSLACP00000012334
RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio
@ENSDARP00000011795
MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus
@ENSONIP00000001395
MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_changeCost.score view on Meta::CPAN
119120121122123124125126127128129130131132133134135136137138139
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata
@ENSTGUP00000003370
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis
@ENSXETP00000030583
MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k
q+r+
+prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae
@ENSLACP00000007242
MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio
@ENSDARP00000085190
MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++
q +a+sl+epcrscshal
dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWK PTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus
@ENSONIP00000003026
MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++
q +a++l+epcrscsh+l
dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_changeID.ali view on Meta::CPAN
232425262728293031323334353637383940414243>Gallus gallus
@ENSGALP00000005317_hmmcleaned
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCSHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Taeniopygia guttata
@ENSTGUP00000002617_hmmcleaned
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCGHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Anolis carolinensis
@ENSACAP00000017686_hmmcleaned
DPVRPGLSQQQ*
*RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN
****
*P
*PTAPRMDLQQTVTNLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Protopterus annectens
@comp246593_c0_seq1_hmmcleaned
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens
@comp301579_c0_seq1_hmmcleaned
DPARPGLSQQQ*
*RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN
****
*P
*ATAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSDDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Latimeria chalumnae
@ENSLACP00000012334_hmmcleaned
GSDPARPGLSQQQ*
*RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PTAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKSILQMSRPVVEGSL
...
>Danio rerio
@ENSDARP00000011795_hmmcleaned
DPARPGLSQQQ*
*WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN
****
*P
*PTAARMELQQQAASLTETCRSCGHSLA
*EHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Oreochromis niloticus
@ENSONIP00000001395_hmmcleaned
AGSGS**********
*GNSDPVRPGLSQQQ
*
*RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PSATRIDLQQQAASLSEPCRSCGHALA
*NHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Homo sapiens
@ENSP00000263754_hmmcleaned
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRADLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Mus musculus
@ENSMUSP00000000724_hmmcleaned
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRGDLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMDRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Canis familiaris
@ENSCAFP00000008685_hmmcleaned
test/GNTPAN12210_hmm_changeID.ali view on Meta::CPAN
57585960616263646566676869707172>Meleagris gallopavo
@ENSMGAP00000011451_hmmcleaned
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus
@ENSGALP00000018380_hmmcleaned
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Meleagris gallopavo
@ENSMGAP00000011414_hmmcleaned
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Taeniopygia guttata
@ENSTGUP00000003370_hmmcleaned
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRAELQQAAASLAEPCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Xenopus tropicalis
@ENSXETP00000030583_hmmcleaned
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN****
*PPPTPPKMDLQQTVVSLAEPCRSCGHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDIEYLFTCV
**
*HKEEDADTKQVY
*FCLFKLLRKCILQMVKPAVEGSL
...
>Latimeria chalumnae
@ENSLACP00000007242_hmmcleaned
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN****
*PPPTPPRVDLQQTVGSLTEPCRSCSHTLA
*DHVSH
*LENVLEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPAVEGSL
...
>Danio rerio
@ENSDARP00000085190_hmmcleaned
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE
*QPTAVSLMEPCRSCSHALG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCV
**
*HKEEDPDTKQVY
*FSLFKLLRKCILQMGRPVVE
*AL
...
>Oreochromis niloticus
@ENSONIP00000003026_hmmcleaned
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN****
*PPPTPPQTEQQSNAVNLQEPCRSCSHTLG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCI
**
*HKEEDADTKQVY
*FSLFKLLRKSILQMGKPMLEAQ
*...
test/GNTPAN12210_hmm_changeID.log view on Meta::CPAN
272829303132333435363738394041424344454647Taeniopygia guttata
@ENSTGUP00000002617
698-730
Anolis carolinensis
@ENSACAP00000017686
1-89
443-529
Protopterus annectens
@comp246593_c0_seq1
Protopterus annectens
@comp301579_c0_seq1
43-89
438-495
577-732
Latimeria chalumnae
@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio
@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus
@ENSONIP00000001395
1-70
Homo sapiens
@ENSP00000263754
test/GNTPAN12210_hmm_changeID.log view on Meta::CPAN
68697071727374757677787980818283848586Anolis carolinensis
@ENSACAP00000000014
425-446
Meleagris gallopavo
@ENSMGAP00000011451
Gallus gallus
@ENSGALP00000018380
Meleagris gallopavo
@ENSMGAP00000011414
Taeniopygia guttata
@ENSTGUP00000003370
425-446
Xenopus tropicalis
@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae
@ENSLACP00000007242
26-107
425-446
Danio rerio
@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus
@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm_changeID.score view on Meta::CPAN
515253545556575859606162636465666768697071
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens
@comp246593_c0_seq1
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens
@comp301579_c0_seq1
MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk
q ra+prakkleklgvfsackanesckcngwknpnp
taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae
@ENSLACP00000012334
RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio
@ENSDARP00000011795
MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus
@ENSONIP00000001395
MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_changeID.score view on Meta::CPAN
119120121122123124125126127128129130131132133134135136137138139
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata
@ENSTGUP00000003370
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis
@ENSXETP00000030583
MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k
q+r+
+prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae
@ENSLACP00000007242
MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio
@ENSDARP00000085190
MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++
q +a+sl+epcrscshal
dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus
@ENSONIP00000003026
MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++
q +a++l+epcrscsh+l
dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_perseqX.ali view on Meta::CPAN
232425262728293031323334353637383940414243>Gallus gallus
@ENSGALP00000005317
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCSHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Taeniopygia guttata
@ENSTGUP00000002617
********************************************************************************************************************************
*QANDACKCNGWKNPN
****
*P
*PTAPRMDLQQPVTNLSEPCRSCGHALA
*DHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Anolis carolinensis
@ENSACAP00000017686
DPVRPGLSQQQ*
*RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN
****
*P
*PTAPRMDLQQTVTNLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Protopterus annectens
@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens
@comp301579_c0_seq1
DPARPGLSQQQ*
*RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN
****
*P
*ATAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSDDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSRPVVEGSL
...
>Latimeria chalumnae
@ENSLACP00000012334
GSDPARPGLSQQQ*
*RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PTAPRMDLQQPAASLSEPCRSCGHALA
*DHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKSILQMSRPVVEGSL
...
>Danio rerio
@ENSDARP00000011795
DPARPGLSQQQ*
*WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN
****
*P
*PTAARMELQQQAASLTETCRSCGHSLA
*EHVSH
*LENVSEEEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Oreochromis niloticus
@ENSONIP00000001395
DPVRPGLSQQQ*
*RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN
****
*P
*PSATRIDLQQQAASLSEPCRSCGHALA
*NHVSH
*LENVSEDEINRLLGMVVDVENLFMSV
**
*HKEEDTDTKQVY
*FYLFKLLRKCILQMSQPVVEGSL
...
>Homo sapiens
@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRADLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Mus musculus
@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN****
*PSPTPPRGDLQQIIVSLTESCRSCSHALA
*AHVSH
*LENVSEEEMDRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKSILQRGKPVVEGSL
...
>Canis familiaris
@ENSCAFP00000008685
test/GNTPAN12210_hmm_perseqX.ali view on Meta::CPAN
57585960616263646566676869707172>Meleagris gallopavo
@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus
@ENSGALP00000018380
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Meleagris gallopavo
@ENSMGAP00000011414
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRADLQQAVVSLTEPCRSCSHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVIEGSL
...
>Taeniopygia guttata
@ENSTGUP00000003370
********************************************************************************************************************************
*QAEESCKCNGWKNPN
****
*PPPTPPRAELQQAAASLAEPCRSCSHALA
*AHVSH
*LENVSEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPVVEGSL
...
>Xenopus tropicalis
@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN****
*PPPTPPKMDLQQTVVSLAEPCRSCGHTLA
*AHVSH
*LENVSEEEMNRLLGIVLDIEYLFTCV
**
*HKEEDADTKQVY
*FCLFKLLRKCILQMVKPAVEGSL
...
>Latimeria chalumnae
@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN****
*PPPTPPRVDLQQTVGSLTEPCRSCSHTLA
*DHVSH
*LENVLEEEMNRLLGIVLDVEYLFTCV
**
*HKEEDADTKQVY
*FYLFKLLRKCILQMGKPAVEGSL
...
>Danio rerio
@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE
*QPTAVSLMEPCRSCSHALG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCV
**
*HKEEDPDTKQVY
*FSLFKLLRKCILQMGRPVVE
*AL
...
>Oreochromis niloticus
@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN****
*PPPTPPQTEQQSNAVNLQEPCRSCSHTLG
*DHVTH
*LENVSEEEMNRLLGIVLDVEYLYTCI
**
*HKEEDADTKQVY
*FSLFKLLRKSILQMGKPMLEAQ
*...
test/GNTPAN12210_hmm_perseqX.log view on Meta::CPAN
303132333435363738394041424344454647484950
451-531
698-730
Anolis carolinensis
@ENSACAP00000017686
1-89
442-529
Protopterus annectens
@comp246593_c0_seq1
Protopterus annectens
@comp301579_c0_seq1
43-89
424-497
577-732
Latimeria chalumnae
@ENSLACP00000012334
13-87
449-478
693-729
779-818
Danio rerio
@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus
@ENSONIP00000001395
1-89
Homo sapiens
@ENSP00000263754
test/GNTPAN12210_hmm_perseqX.log view on Meta::CPAN
73747576777879808182838485868788899091Anolis carolinensis
@ENSACAP00000000014
425-446
Meleagris gallopavo
@ENSMGAP00000011451
Gallus gallus
@ENSGALP00000018380
Meleagris gallopavo
@ENSMGAP00000011414
Taeniopygia guttata
@ENSTGUP00000003370
425-446
Xenopus tropicalis
@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae
@ENSLACP00000007242
26-107
412-446
Danio rerio
@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus
@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm_perseqX.score view on Meta::CPAN
515253545556575859606162636465666768697071
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens
@comp246593_c0_seq1
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens
@comp301579_c0_seq1
MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
++dparpglsqqqrasqrk
q ra+prakkleklgvfsackanesckcngwknpnp
taprmdlqqpa+slsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae
@ENSLACP00000012334
RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
+g+dparpglsqqqrasq+k+qvr++prakkleklgvfsackan++ckcngwknpnppt+prmdlqqpa+slsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio
@ENSDARP00000011795
MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
g +++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+a+sl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus
@ENSONIP00000001395
MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+a+slsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
DPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_perseqX.score view on Meta::CPAN
119120121122123124125126127128129130131132133134135136137138139
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata
@ENSTGUP00000003370
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq a+sl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgr+ll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis
@ENSXETP00000030583
MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
r++ +k
q+r+
+prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae
@ENSLACP00000007242
MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
+++r++++kaq+ra+prakkleklgv+sacka+esckcngwk pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio
@ENSDARP00000085190
MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
+++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk +np p t+pr++
q +a+sl+epcrscshal
dhv hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus
@ENSONIP00000003026
MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
+++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk +np pt+p +
q
a++l epcrscsh+l dhv hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...