Bio-Grid-Run-SGE

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scripts/cl_syntax_error.pl  view on Meta::CPAN


job->run(
  {
    task => sub {
      my ( $result_prefix, $idx_item ) = @_;

      job->log->info("Running $idx_item->[0] -> $result_prefix");
      jspew( $result_prefix . ".env.json",  \%ENV );
      jspew( $result_prefix . ".item.json", $idx_item );
      sleep 1;
      function_that_does_not_exist();

    },
    post_task => sub {
      my $c = job->config;
      open my $fh, '>', File::Spec->catfile( $c->{result_dir}, 'finished' )
        or die "Can't open filehandle: $!";
      say $fh job->env('job_id');
      $fh->close;
    },
    usage => \&usage,

t/boilerplate.t  view on Meta::CPAN

#!perl -T

use strict;
use warnings;
use Test::More tests => 1;

sub not_in_file_ok {
    my ($filename, %regex) = @_;
    open( my $fh, '<', $filename )
        or die "couldn't open $filename for reading: $!";

    my %violated;

    while (my $line = <$fh>) {
        while (my ($desc, $regex) = each %regex) {
            if ($line =~ $regex) {
                push @{$violated{$desc}||=[]}, $.;

t/boilerplate.t  view on Meta::CPAN

    if (%violated) {
        fail("$filename contains boilerplate text");
        diag "$_ appears on lines @{$violated{$_}}" for keys %violated;
    } else {
        pass("$filename contains no boilerplate text");
    }
}

sub module_boilerplate_ok {
    my ($module) = @_;
    not_in_file_ok($module =>
        'the great new $MODULENAME'   => qr/ - The great new /,
        'boilerplate description'     => qr/Quick summary of what the module/,
        'stub function definition'    => qr/function[12]/,
    );
}

module_boilerplate_ok('lib/Bio/Grid/Run/SGE.pm');



( run in 0.411 second using v1.01-cache-2.11-cpan-0a987023a57 )