MRS-Client

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lib/MRS/Client/blast.result.xml.template  view on Meta::CPAN

  <BlastOutput_query-len>${SEQLEN}</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>${PARMATRIX}</Parameters_matrix>
      <Parameters_expect>${PAREXPECT}</Parameters_expect>
      <Parameters_gap-open>${PARGAPOPEN}</Parameters_gap-open>
      <Parameters_gap-extend>${PARGAPEXTEND}</Parameters_gap-extend>
      ${PARFILTER}
    </Parameters>
  </BlastOutput_param>
  <BlastOutput_iterations>
    <Iteration>
      <Iteration_iter-num>1</Iteration_iter-num>
      <Iteration_hits>$$HITSTART
        <Hit>
          <Hit_num>${HITNR}</Hit_num>
          <Hit_id>${HITID}</Hit_id>
          <Hit_accession>${HITID}</Hit_accession>
          ${HITSEQID}
          <Hit_len>${HITSUBLEN}</Hit_len>
          <Hit_hsps>$$HSPSTART

lib/MRS/Client/blast.result.xml.template  view on Meta::CPAN

        <Statistics>
          <Statistics_db-num>${DBCOUNT}</Statistics_db-num>
          <Statistics_db-len>${DBLENGTH}</Statistics_db-len>
          <Statistics_eff-space>${DBSPACE}</Statistics_eff-space>
          <Statistics_kappa>${KAPPA}</Statistics_kappa>
          <Statistics_lambda>${LAMBDA}</Statistics_lambda>
          <Statistics_entropy>${ENTROPY}</Statistics_entropy>
        </Statistics>
      </Iteration_stat>
    </Iteration>
  </BlastOutput_iterations>
</BlastOutput>



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