Bio-MLST-Check

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META.json  view on Meta::CPAN

            "LWP::Simple" : "0",
            "LWP::UserAgent" : "0",
            "List::Util" : "0",
            "Moose" : "0",
            "Moose::Role" : "0",
            "Moose::Util::TypeConstraints" : "0",
            "POSIX" : "0",
            "Parallel::ForkManager" : "0",
            "Regexp::Common" : "0",
            "Text::CSV" : "0",
            "Try::Tiny" : "0",
            "XML::LibXML" : "0",
            "lib" : "0",
            "strict" : "0",
            "warnings" : "0"
         }
      },
      "test" : {
         "recommends" : {
            "CPAN::Meta" : "2.120900"
         },

META.yml  view on Meta::CPAN

  LWP::Simple: 0
  LWP::UserAgent: 0
  List::Util: 0
  Moose: 0
  Moose::Role: 0
  Moose::Util::TypeConstraints: 0
  POSIX: 0
  Parallel::ForkManager: 0
  Regexp::Common: 0
  Text::CSV: 0
  Try::Tiny: 0
  XML::LibXML: 0
  lib: 0
  strict: 0
  warnings: 0
resources:
  homepage: http://www.sanger.ac.uk/
  repository: https://github.com/sanger-pathogens/mlst_check.git
version: 2.1.1706216
x_Dist_Zilla:
  perl:

Makefile.PL  view on Meta::CPAN

    "LWP::Simple" => 0,
    "LWP::UserAgent" => 0,
    "List::Util" => 0,
    "Moose" => 0,
    "Moose::Role" => 0,
    "Moose::Util::TypeConstraints" => 0,
    "POSIX" => 0,
    "Parallel::ForkManager" => 0,
    "Regexp::Common" => 0,
    "Text::CSV" => 0,
    "Try::Tiny" => 0,
    "XML::LibXML" => 0,
    "lib" => 0,
    "strict" => 0,
    "warnings" => 0
  },
  "TEST_REQUIRES" => {
    "Env::Path" => 0,
    "ExtUtils::MakeMaker" => 0,
    "File::Slurp" => 0,
    "File::Spec" => 0,

Makefile.PL  view on Meta::CPAN

  "Moose::Util::TypeConstraints" => 0,
  "POSIX" => 0,
  "Parallel::ForkManager" => 0,
  "Regexp::Common" => 0,
  "String::Util" => 0,
  "Test::Exception" => 0,
  "Test::MockModule" => 0,
  "Test::More" => 0,
  "Test::Most" => 0,
  "Text::CSV" => 0,
  "Try::Tiny" => 0,
  "XML::LibXML" => 0,
  "lib" => 0,
  "strict" => 0,
  "warnings" => 0
);


unless ( eval { ExtUtils::MakeMaker->VERSION(6.63_03) } ) {
  delete $WriteMakefileArgs{TEST_REQUIRES};
  delete $WriteMakefileArgs{BUILD_REQUIRES};

lib/Bio/MLST/Download/Databases.pm  view on Meta::CPAN

package Bio::MLST::Download::Databases;
# ABSTRACT: Represents multiple databases of species
$Bio::MLST::Download::Databases::VERSION = '2.1.1706216';

use Moose;
use Bio::MLST::Download::Database;
use Parallel::ForkManager;

use Try::Tiny;
use File::Copy qw(move);
use File::Path qw(make_path rmtree);
use POSIX qw(strftime);

has 'databases_attributes' => ( is => 'ro', isa => 'HashRef', required => 1 );
has 'base_directory'       => ( is => 'ro', isa => 'Str',     required => 1 );

has 'parallel_processes'   => ( is => 'ro', isa => 'Int',     default => 0 );

has '_species_to_exclude'  => ( is => 'ro', isa => 'Str',     default => 'Pediococcus' );

t/00-report-prereqs.dd  view on Meta::CPAN

                                      'LWP::Simple' => '0',
                                      'LWP::UserAgent' => '0',
                                      'List::Util' => '0',
                                      'Moose' => '0',
                                      'Moose::Role' => '0',
                                      'Moose::Util::TypeConstraints' => '0',
                                      'POSIX' => '0',
                                      'Parallel::ForkManager' => '0',
                                      'Regexp::Common' => '0',
                                      'Text::CSV' => '0',
                                      'Try::Tiny' => '0',
                                      'XML::LibXML' => '0',
                                      'lib' => '0',
                                      'strict' => '0',
                                      'warnings' => '0'
                                    }
                    },
       'test' => {
                   'recommends' => {
                                     'CPAN::Meta' => '2.120900'
                                   },