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GPL.txt  view on Meta::CPAN

MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.  THE ENTIRE RISK AS
TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU.  SHOULD THE
PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING,
REPAIR OR CORRECTION.

  12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR
REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES,
INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING
OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED
TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY
YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER
PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE
POSSIBILITY OF SUCH DAMAGES.

		     END OF TERMS AND CONDITIONS

	    How to Apply These Terms to Your New Programs

  If you develop a new program, and you want it to be of the greatest
possible use to the public, the best way to achieve this is to make it

INSTALL  view on Meta::CPAN

    in the correct format. Although this database is not required for ALBD
    (since co-occurrence data is loaded from a co-occurrence matrix), it is
    required to run UMLS:Association. If you ran UMLS::Association to
    generate a co-occurrence matrix, you should be fine. Otherwise you will
    need to create a dummy database that it can connect to. This can be done
    in a few steps:

    1) open mysql type mysql at the terminal

    2) create the default database in the correct format, type: CREATE
    DATABASE cuicounts; use cuicounts; CREATE TABLE N_11(cui_1 CHAR(10),
    cui_2 CHAR(10), n_11 BIGINT(20));

CONTACT US
    If you have any trouble installing and using ALBD, please contact us us
    directly :

        Sam Henry: henryst at vcu.edu

        Bridget McInnes: btmcinnes at vcu.edu

README  view on Meta::CPAN

    in the correct format. Although this database is not required for ALBD
    (since co-occurrence data is loaded from a co-occurrence matrix), it is
    required to run UMLS:Association. If you ran UMLS::Association to
    generate a co-occurrence matrix, you should be fine. Otherwise you will
    need to create a dummy database that it can connect to. This can be done
    in a few steps:

    1) open mysql type mysql at the terminal

    2) create the default database in the correct format, type: CREATE
    DATABASE cuicounts; use cuicounts; CREATE TABLE N_11(cui_1 CHAR(10),
    cui_2 CHAR(10), n_11 BIGINT(20));

  INITIALIZING THE MODULE
    To create an instance of the ALBD object, using default values for all
    configuration options: %options = (); $options{'lbdConfig'} =
    'configFile'; my $lbd = LiteratureBasedDiscovery->new(\%options);
    $lbd->performLBD();

    The following configuration options are also provided though: