Bio-Lite
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lib/Bio/Lite.pm view on Meta::CPAN
sub reverseComplemente {
my $seq = reverse shift;
$seq =~ tr/ACGTacgt/TGCAtgca/;
return $seq;
}
my %conversion_hash = ( '+' => 1, '-' => '-1', '1' => '+', '-1' => '-');
sub convertStrand($) {
my $strand = shift;
return $conversion_hash{$strand};
}
sub seqFileIterator {
my ($file,$format) = @_;
croak "Missing file in argument of seqFileIterator" if !defined $file;
( run in 0.371 second using v1.01-cache-2.11-cpan-65fba6d93b7 )