EdgeExpressDB
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www/edgeexpress/view/edgeExpress.js view on Meta::CPAN
url+=","+node.value;
}
}
else if(document.getElementById("L3").checked)
{
poptions = document.getElementById("L3Promoters");
url+='&names=';
comma = "";
for(i=0; i<poptions.childNodes.length; i++)
{
node = poptions.childNodes[i];
if(node.type == 'checkbox' && node.checked)
{ url+=comma+node.value; comma=","; }
}
}
url+= "&type="+ (type==null?"cage,illumina,qrt-pcr":type);
rows = feature.getData();
if(rows[0]["featuresource/@category"]!=null && rows[0]["featuresource/@category"]=="miRBase")
{
url += (rows[0]["featuresource/@name"]=="miRBase_mature"?",miRNA&mature=true":",miRNA&mature=false");
}
dataset = "";
if(document.getElementById("riken1").checked)
dataset += "1";
if(document.getElementById("riken3").checked)
{
if(dataset.length>0)
dataset+=",";
dataset+="3";
}
if(document.getElementById("riken6").checked)
{
if(dataset.length>0)
dataset+=",";
dataset+="6";
}
if(dataset.length>0)
url += "&dataset="+dataset;
if(size!=null)
url += "&size="+size;
else
{
document.getElementById("expressionGraphs").innerHTML="<br><br><br><br><br><br><br>Fetching Expression Data.....<br><br><br><br><br><br><br>";
document.getElementById("graphValues").innerHTML="";
}
url += "&rnd="+Math.random();
url = url.replace(/[\+]/g,'%2B');
expressXMLHttp=GetXmlHttpObject()
if (expressXMLHttp==null)
{
alert ("Your browser does not support AJAX!");
return;
}
if(size!=null)
expressXMLHttp.onreadystatechange=popupGraph;
else
expressXMLHttp.onreadystatechange=displayGraph;
expressXMLHttp.open("GET",url,true);
expressXMLHttp.send(null);
}
function popupGraph()
{
if(expressXMLHttp.readyState==4)
{
var xmlDoc=expressXMLHttp.responseXML.documentElement;
nodes = xmlDoc.getElementsByTagName("graph");
window.open(imageURL+nodes[0].getAttribute("url"),'largeGraph');
}
}
function displayGraph()
{
valuesrx = /([\d\.-]+)/g;
if (expressXMLHttp!=null && expressXMLHttp.readyState==4)
{
if(expressXMLHttp==null || expressXMLHttp.responseXML==null || expressXMLHttp.responseXML.documentElement==null)
{
//alert('Problem fetching Expression Data!');
document.getElementById("expressionGraphs").innerHTML="<br><br>Error retrieving expression data.";
return;
}
var xmlDoc=expressXMLHttp.responseXML.documentElement;
var imageTable = "<table width=\"100%\" border=\"0\"><tr>";
var dataTable = "<table width=\"100%\" border=\"0\" cellspacing=\"0\" cellpadding=\"0\"><tr>";
var dataHeader="";
var nodes;
var dataFound = false;
for(i=0; i<xmlDoc.childNodes.length; i++)
{
nodes = xmlDoc.getElementsByTagName("graph");
if(nodes==null || nodes[i]==null)
{
continue;
}
dataFound = true;
width = 100/nodes.length;
if(nodes[i].getAttribute("url")!=null)
imageTable+="<td align=\"center\" width=\""+width+"%\">"
+"<a href=\"#\" onClick=\"window.open('graphLoading.html','largeGraph');updateGraphs('large','"+nodes[i].getAttribute("type") +"');return false;\">"
+"<img border=\"0\" src=\""+imageURL+nodes[i].getAttribute("url")+"\"></a></td>";
genes = nodes[i].getElementsByTagName("gene");
dataTable+="<td valign=\"top\" align=\"center\" width=\""+width+"%\"><table border=\"1\" class=\"small\" cellpadding=\"0\" cellspacing=\"0\">";
for(n=0; n<genes.length; n++)
{
values = genes[n].getAttribute("data").match(valuesrx);
if(n==0)
{
dataTable+="<tr><th> </th>";
for(v=0; v<values.length; v+=2)
dataTable+="<th>"+values[v]+"</th>";
dataTable+="</tr>";
( run in 0.613 second using v1.01-cache-2.11-cpan-364913b4093 )