view release on metacpan or  search on metacpan

test/seq_profiles2_clustal.fasta  view on Meta::CPAN

>sp|D4GVD7|CETZ1_HALVD Tubulin-like protein CetZ1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-176
-----------------------------------------------------------M
KLAMIGFGQAGGKVVDKFV----------EYDRERNAGIVRAAVAVNSAKADLLGLKNIP
KDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIP-VHEVDAFLVVSGLGGG
TGSGGAPVLAKHLKRIYTEP-VYGLGILPGSDEGGIYTLNAARSFQTFVR-EVDNLLVFD
NDAWRKTGES--VQGGYDEINEEIVNRFGVLFGAGEVQDGQEVAESVVDSSEIINTLA-G
GGVSTVGYASEGVEPRKN-NGGGLLSRLTGGDEPDDNLDTAHTTNRITSLVRKAALGRLT
LPCEIE--GAERALLVLAGPPEHLNRKGIERGRKWIEEQTGSME----VRGGDYPI-PGA
EKVAGVILLSGVTNVPRIKELQQVAIEAQDNIEEIRQ--ESDSNLE-TLINDDEDELESL
F----------------------
>sp|D4GTC1|CETZ2_HALVD Tubulin-like protein CetZ2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-176
-----------------------------------------------------------M
KTVLIGVGQAGGKLASALQ----------SFDRQTGFGAVLDAVAVNTAKADLQSLPV--
--ETVLIGQDRVNGHGVGGDNELGAAVMESDQTEVMSALDGRV-TAEAESIFVVAGLGGG
SGSGGAPVLAKALAGVYDVP-VYVLGILPGADEGALYQVNAGRSLKTVAR-EADAVLLVD
NDAFRSAGES--MSEGYDAINEAIARRVGLLLAAGEATE--GVGESVVDTSEVINTLR-S
GGIAALGYASAEASPN-----------------------AEDNINAVMSTTRRAVLTGTS
LPDAS---DADAALVVIAGEPDTIPRKGVERARRWVEDETGSMQ----VRGGDFPL-ESG
-RLASLVLLGGVERSERVESFMERAREAIDKAETEPR--ED------PKGMWHSDDLDDL
L----------------------
>sp|A0B5R2|CETZ_METTP Tubulin-like protein CetZ OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=cetZ PE=1 SV=1
----------------------------------------------------------ML
NVLMLGVGQCGNRILDAVNRQAFGGSRLAKYYSKQRFPSRVETIAINTAINDLKELKFTA
AKDRLHV----PNLHGVGANRSKGKQGFWENQEMILEEIEKR---GDFDLIFVMTSVSGG
TGSSFSPLMIHELKKRYKNATIVPIAVLPFREEGTIYLQNAAFCLREMIEVEADGMILVD
NQYLKRFSGD--IASAYDRINTMVAQRLLFLIEALDSEM-----LSVTDLGDFKTVMNGG
LRMGTLGYYQADKKSPSIRA-------------------------AI---KNSLREVGLL
YPANVDAGEAGRAMIVIQGSREYLNVDEITKEIESLTETIGHV------FKGIVIK-KGE
PRVLSVL---SLERAPGLVELYEKAKWAIQEERERKD--RARSEL--YEAFEQINDLEEI
Y----------------------
>sp|D4GU26|CETZ5_HALVD Tubulin-like protein CetZ5 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-176
-----------------------------------------------------------M
KVLCFGMGQAGGNVLDALL----------RYEQRTNADYVVDAVAYNTASADLRGLDLVP
EENRILFGADEVSGHGVGADNELAAELAERDSRQLLRGTDGAP-TSTADAFLIFAGLGGG
TGSGAAPVLAKHLNRIYEQP-IYGVGILPAADEGALYSRNAARSLKALVD-VTDHVFAFD
NGAWAESGED--VAQAHDTMNEVLVRRLGILFASGEVAESGTVAESVVDSSEVINTLR-G
GGISTIGYAASELPESDGGGGFSIKGLL-GGD--SSSTDELDSINRITTQTRKAVLGQLT
LPCDVD--SASRGLVVVSGPPEWLNRKAVERSRTWVEEQTGSME----VRGGDYPL-SES
NHVGVLVLLGDVSRSDRVAEIRSTAVEAEQNRRERIA--SDAADREDGTEAVVDDRLDSL
F----------------------
>sp|D4GW48|CETZ3_HALVD Tubulin-like protein CetZ3 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-176
-----------------------------------------------------------M
KLALIGIGQAGGKVVDALV----------DYERRTKTGFVVDAIAVNSARADLRGLRTAP
ESRQVLVGLTRVKGHGVGADNELGAEVIAEDVGEVLSMIDDLP-VHEIDAFLVVAGLGGG
TGSGGAPVIARELKHIYTEP-VYGLGILPARDEGGIYTLNAARSFQTFVR-EVDNLIVFD
NDAWRKTGES--LEAGYGSLNAELARRLGVLFSAGEGDGSGAVAESVVDASEIINTLG-S
GGVSTIGYAAVELDRP----KRGLLSRLSGGKAEAD--DGGDSTNRITSLVRRAALGRLT
LPCEIS--GAERGLVVVAGPSDVLSRRGIERARTWLEDETGTME----IRGGDYPI-DSN
-FVAAVVLLSGVYDVPRVKELQAVAIETQRDMLAKRE--SSAASLD-DLVSTGDDRIEPL
F----------------------
>sp|Q9V0H5|CETZ_PYRAB Tubulin-like protein CetZ OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=cetZ PE=3 SV=1
-----------------------------------------------------------M
RAIIIGIGQCGGKIADIFS----------LVD--------FEAIAINTSRGDLEYLKHIP
QDKRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKINSMVGYEDVDIFFLTFGFGGG
TGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-VVDSIIAID
NNKLKESDED--ISQAYERINYTIVERIASLLALIDVPG-----EQTLDASDLKFVLRAM
GSFATVGYAKADAEKVKS------LSRLI---------------------IRSFENEGLY
LDVSLE--SALYGLVAIHGPPEVLKAKDIFEALNELTQRIRGKQ----IFRGFYPD-PRE
RSVEVVTLLSGIYESKSIEDIILTAKKYAREFMKAKE--EGEAKK--RELLSGLPDFDDV
YSGEESEG---------------
>sp|D4GU81|CETZ6_HALVD Tubulin-like protein CetZ6 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-176
-----------------------------------------------------------M
NVFCFGAGKAGGRVVEQLL----------EYERQRNPDFISGAAACDTTAADLDALELIP
EDARALFGATETNGQGFDGDAERGAAAAADEHRKLLEPTDDAP-IAASDAFVVCAGLGGG
TGGPTAAVLAERLSEVYDQP-VYGVGIFSTATTDQQHASNTLRSLRQLVS-KTDHVFGFD
TAAWVKNEDEPISDEAYDTLNAELARRLGTLFAAGEVTTADDVGASVVDASEIMNTLR-G
GGLATLGYSERPLPPRDTSV-VGRLKRLVGDD--AESVDQIDSLNRITTQTREAVRGQLT
LSCDIG--SASRGLLVITGRPAWLNRDAISQNQGWIEEQTGSLE----VRNGDDPR-PDA
DALSVLVLLGGINPTAQLTALQAVADAGDSGDA---------------------------
-----------------------
>sp|D4GQ67|CETZ4_HALVD Tubulin-like protein CetZ4 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-176
-----------------------------------------------------------M
KLGVVGLGQAGGKIVDALL----------EYDQRTNCHIVHDALTVNTATADLNALEHIP
ADARVLIGKSQVGGQGVGGDNELGATITTEDITEIQHVIDTIS-VHEIDAFLLVAALGGG
TGSGALPVVGRHLKQLYTEP-VYGLGILPSTNEGGLYSLNAARSLQTAVR-ELDNLLIFD
NDAHRQANES--LTGGYAAINRELATRLGVLFGAGDIDTGTANPESVVDASEIINTLK-G
GGVSTLGYASQSLEEEDGAEAAGLLSRFKRE----SSTDSAGGTNRITSLVRRATLGRLT
LPVEPANVSIDRGLVIVAGPSDCLNRKGIERGRTWVEEQTGCLS----IRGGDYPL-PES
NTVAVVVLFSGISGADRLHELRSIGSEAQTTGAERTG--SSDRHLE-SILGDDADELDSL
F----------------------
>sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=
-----------------------------------------------------------M
RAIIIGIGQCGTKIADIFS----------LVD--------FEALAINTSKSDLEYLKHIP
PERRILVGESIVGGKGVNANPLLGREAMKRDLPMVMKKISSLVGYEDVDIFFLTFGFGGG
TGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSR-IVDSIIAID
NNKLKESDED--ISQAYEKINYAIVERIASLLALIDVPG-----EQTLDASDLKFVLRAM
GSFATVGYAKADATKIKS------LSRLI---------------------IRSFENEGLY
LDVNLE--SALYGLVAIHGPPEVLKAKEIFDALSELSQRIRGKQ----IFRGFYPD-PRE
REVEVVTLLSGIYESKSIENIVITAKRYAREFMKAKE--EGEMKK--RELLKGLPDFEDI
YPGEVDEG---------------
>sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
-----------------------------------------------------------M
RAIIIGIGQCGTKIADIFS----------LVD--------FEALAINTSRGDLEYLKHIP
PDRRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKISSLVGFEDVDIFFLTFGFGGG
TGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-IVDSIIAID
NNKLKESNED--ISQAYERINYAIVERIASLLALIDVPG-----EQTLDASDLKFVLRAM
GSFATVGYAKADATKIKS------LSRLI---------------------IRSFENEGLY
LDVNIE--SALYGLVAIHGPPEALKANEIFEALNELTQRIRGKQ----IFRGFYPD-PRE
REVEVVTLLSGIYESKSIEEIVITAKKYAQEFLKAKE--EGESKK--KKLLSGLPDFDDI
YPGEADDQS--------------
>sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1
-----------------------------------------------------------M
RALIIGVGQCGTKIADLFA----------LVD--------FDTIALNTSRGDLEYLKHIP
HDRRILIGESITGGKGVNANPLLGREAMKRDLPLVMRKIGSIVGYEDVDIFFLTFGFGGG
TGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-VADSIIAID
NNKLKESGDD--ISSAYEKINYTIVERIASLLALVDVPG-----EQTLDASDLKFVLKAF
GSFATVGYAKADASKVKN------LSRLI---------------------IKSFESEGLY
LDANIE--SALYGLVAIHGPPEVLKASDIFEALDYLTSKIRGKQ----IFRGFYPD-PRE
RDVEVVTLLSGIYESKSIENIVRTAKEYARSFMQAKS--EAETKK--KELLTGLPDFDDV
YPSLEATGSDDPEGFAEYREVSR
>sp|Q57816|FTSZ1_METJA Cell division protein FtsZ 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 
---MKFLKNVLEEGSKLEEFN-------------------ELELSPEDKELLEYLQQTKA
KITVVGCGGAGNNTITRLKMEGIEGAK---------------TVAINT---DAQQLIRTK
ADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQD------SDMVFITCGLGGG
TGTGSAPVVAEISKKIG--ALTVAVVTLPFVMEGKVRMKNAMEGLERLKQ-HTDTLVVIP
NEKLFEIVPNMPLKLAFKVADEVLINAVKGLVELITKDG-----LINVDFADVKAVMN-N
GGLAMIGIGESDSEKRAKEA------------------------------V-SMALNSPL
LDVDID--GATGALIHVMGPEDLT----LEEAREVVATVSSRLDPNATIIWGATIDENLE
NTVRVLLVITGVQS-RIEFTDTGLKRKKLEL--------TGIPKI---------------
-----------------------
>sp|Q48327|FTSZ1_HALVD Cell division protein FtsZ 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1
--MDSIVGDAIDEA--EAEDMGDE------SAQVDGAANINRSGTMTDDELKAVLKDLQT
NITVVGCGGAGGNTVNRMHEEGIKGAK---------------LVAANT---DVQHLVEIG
ADTKILMGEQKTQGRGAGSLPQVGEEAALESQEEIYDAIEG------SDMVFVTAGLGGG
TGTGSAPVVAKAARESG--ALTIAIVTTPFTAEGEVRRTNAEAGLERLRD-VSDTVIVVP
NDRLLDAVGKLPVRQAFKVSDEVLMRSVKGITELITKPG-----LVNLDFADVKTVME-R
GGVAMIGLGESDSESKAQES------------------------------V-KSALRSPL
LDVDIS--GANSALVNVTGGSDMS----IEEAEGVVEEIYDRIDPDARIIWGTSVDDELE
GMMRTMIVVTGVES-PQIYGRNGEAQAH---------------------AEERLEDIDYV
E----------------------
>sp|Q9V2S0|FTSZ1_PYRAB Cell division protein FtsZ 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ftsZ1 PE=3 SV=1
--MLKLVENVVERVSAEEQKP----------------QEIQVPQSSIDEELKKIVEQIKA
RIYVVGVGGAGCNTVNRMMEVGVTGAK---------------IIAVNT---DAQDLLKIK
AHQKILIGKELTRGLGAGNDPKIGEEAAKESERELREALEG------ADMVFVTCGLGGG
TGTGAAPVIAEMAKKMG--ALTVSVVTLPFTMEGIRRAKNAEYGLKRLAK-ASDTVIVIP
NDKLLEVAPKLPIQMAFKVADEILVQAVKGITELITKPG-----LVNLDFNDVRAVMK-D
GGVAMIGIGESDSEKRALEA------------------------------A-EQALNSPL
LDVDIS--GAKGALISISGA-DVK----LEEAQQIIEYVTRNVDPKAQVIWGIQLEPELE
KTIRVMVIVTGVTS-RYITFQEET-PEPSEEE--VPPVKIDIPEL---------------
-----------------------
>sp|O29715|FTSZ1_ARCFU Cell division protein FtsZ 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ftsZ1
MFMKSIVEEALARAEREKKERIEGR-----------------GFEDVEDEILQVLHELKT
VIKVIGVGGGGCNTITRMYEEGIEGAE---------------LIALNT---DVQHLYYTK
ANRRILIGKRRTRGLGAGSLPQVGEEAARESEDEIKKLVEG------SDMVFVTCGLGGG
TGTGAAPVVAEAAQEAG--ALTIAVVTFPFSAEGAVRRANAEAGLERLRE-VADTVIVIP
NDRLLEVVPNYPMQLAFKVADEILMRAVKGITELITKPA-----LINLDFADVRTVME-K
GGVAMIGLGEASGEDKAAES------------------------------V-RKALKSPL
LDVDVS--GAKAALVNVTGGPDMT----IEEAESVIEEIYSKVDPDARIIWGAMIDPELE
NTMRTLIIVTGVKS-PQILGRKGYPVTRKY-------------------------GIDFV
R----------------------
>sp|Q9HS71|FTSZ1_HALSA Cell division protein FtsZ 1 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=ftsZ1 PE=3 SV=1
--MDSIVQDAIDEAEESEDSASEP------ADVAGGGGDTVPTGTMTDNELEDVLQELQT
NITVVGCGGAGSNTVDRMATEGIHGAD---------------LVAANT---DVQHLVDIE
ADTKILMGQQKTKGRGAGSLPQVGEEAAIESQGEIRDSIAG------SDMVFVTAGLGGG
TGTGSAPVVAKAAREQG--ALTIAIVTTPFTAEGEVRRTNAEAGLERLRD-VADTVIVVP
NDRLLDSVGKLPVREAFKVSDEVLMRSVKGITELITKPG-----LVNLDFADVRTVME-K
GGVAMIGLGEADSDAKAADS------------------------------V-QSALRSPL
LDVDIS--SANSALVNVTGGPGMS----IEEAEGVVEQLYDRIDPDARIIWGTSIDEQIQ
EEMRTMVVVTGVDS-PQIYGRNEAAEGDGPAQESTP-----EPEPE-PQAGSEIEDIDYV
E----------------------
>sp|Q8TZK3|FTSZ1_PYRFU Cell division protein FtsZ 1 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=ftsZ1 PE=3 SV=1