• Your recent searches
Bio-MUST-Apps-TwoScalp
9 results

 view release on metacpan or  search on metacpan

test/nonal-group_21.fasta  view on Meta::CPAN 

DK----CRTRVSPNSSFKVISALIGIHNQVI--T----SE-DSKMEYD-GMN-YP-V---
--------DAW-----------NAD-LRLEDAFRSSCIWYFRKVIDEVGQETIQEELNKL
DYGNCDISEWSG------SGVNSFPELNGFWIE----------SSLMISPIEQVEVLHKI
MEGETIY-TKSEIEILKSIM------LLE--A--------S------------DSKKIYG
KTGT-----------------G----T--DG--------------------T--------
-------AWFIGF-V--EK----E-------NTN-I-YFAI---------YLD-----D-
-----D------S---------S----NEI--------------SGI----KAQEIAFN-
IL------------------E--E------------------
>BLARSTAAU|BLAR1|no|no-Clostridium_sp._GCF_000732725.1@WP_051869333.1
----------------------------------------MG------------------
---INMVKN----------------------RKRIYF--------------LLT------
----VFVIT-------VIILG--------VT------IYYIRNNTVIFMN---QEVYVDV
VNESEIHVK--GLP--------ANTENFSETYMIKKTDTLKILDRQGREIDFES--L---
NVGNILIFDYKGLMVP--------------------------------------------
------------------K-SGSYL-----------------------------------
----------------------------------------NRGIYDVRLSGEVFNNK---
-------------------FWNVEFGDGKSR------KSQPEQT-LTGNQTEEKK-----
------QEGKKIQDIENS--EPRIV-----------------------------------
----TAY---------YEEEFHTIQ--------GC-------------------------
-------AV----IF---------------------------------DASKNIYTFYNE
KE----CKEQVSPCSTFKVISSLMGIHNQIV--T----SK-ESKMGYS-GAK-YP-T---
--------EAW-----------NAD-LSLADAFQNSCVWYFRKIIDEVGQEEVRKELQSL
NYGNCDISEWNG------NSTNSYPELNGFWLE----------SSLKISPLEQVDILRNI
IEGKTIY-SKNEVDILKSIM------LIE--E--------N------------KTEKIYG
KTGT-----------------G----T--NG--------------------N--------
-------AWFIGA-V--EK----D-------GSN-T-YFAI---------YLN-----D-
-----S------T---------S----DMV--------------SGA----KAREIALS-
IL------------------D--EL-----HI------S---
>BLARSTAAU|BLAR1|no|no-Bariatricus_massiliensis_GCF_900086725.1@WP_066733550.1
------------------------------------------------------------
-------------------------------MKK--------------------------
----------------QVIMG--------MC------I----------------------
------------------------------------------------------------
------------LMLG--------------------------------------------
------------------I-CGCA------------------------------------
------------------------------------------------------------
-------------------------------------KSEEEQTAVRKNTAKEAV-----
------TE-------------PLIE-----------------------------------
----TVD---------YGEIFGGTE--------GC-------------------------
-------AV----IY---------------------------------ETSNNTYSFYEE
EM----CRRQASPWSTFKIAATLMGLHNQVV--T----SE-DSRMGYD-GTA-YP-L---
--------EAW-----------NQD-LNLKEAFQQSCVWYFRKVIDGVGEEEARAQLQAL
DYGNCDSSQWSG------SGVNPLPELNGFWLG----------SSLKISPLQQVEMLRNI
VEGRTIY-SDKEVETLKNCM------LTE--S--------D------------STQKIYG
KTGT-----------------G----Q--H---------------------E--------
-------GWFVGF-V--EK----E-------NTV-T-YIAV---------YLD-----D-
-----T------D---------S----ETV--------------NGA----GARQIAME-
IL------------------R---------------------
>+1|BLARCLODI|BLAR1|no|no-Clostridiales_bacterium_GCF_000509145.1@WP_025487388.1
------------------------------------------------------------
-------------------------------MSKRGK--------------SKR------
----SH--R-------CAVFL--------SV------V----------------------
------------------------------------------------------------
------------LCAG--------------------------------------------
------------------LFTGCGD-----------------------------------
-----------------------------------------------KKAVEI-------
-------------------------STGSTA------AEKDVRDPYDGQSIDEQP---NI
TETD--TPPAEPHQASLE--NAAQE-----------------------------------
----NVD---------YSETFGGLN--------GC-------------------------
-------AV----VF---------------------------------DPQEQVCRFYNK
TL----CETAVSPCSTFKIVSALMGLKYHVL--E----NE-NSTMGYD-GTQ-YG-N---
--------AAW-----------NQD-LSLKDAFQSSCVWYFRKVIDQVGQERVKEELTAL
DYGNCNISEWAG------SGINPGEELNGFWLA----------SSLKISPYEQVRVLSDI
FEGRTGF-SPEHVKIVKNIM-----------S--------A------------DGGGIYG
KTGT-----------------G----T--KG--------------------Q--------
-------AWFVGF-S--ES----E-------EKR-T-YFAV---------YLE-----DT
-----D------N---------R----EQV--------------SSK----KAKEIALK-
II------------------G--Q------------------
>BLARSTAAU|BLAR1|no|no-Cellulosilyticum_ruminicola_GCF_001311925.1@WP_054741192.1
------------------------------------------------------------
-------MNSK--------------------MRN--------------------------
--------K-------ILSSG--------LV------I----------------------
-----------GL-----------------------------------------------
------------LGSA--------------------------------------------
------------------L-VGCGQ-----------------------------------
----------------------------------------TQNAAVNSVGGN--------
--------------------------TAQTA------NQTAGQT-INQEAVNDEA-----
-----VSEVQQSEAVALE----GLE-----------------------------------
----DVD---------YSSDFEGIN--------GC-------------------------
-------AV----FY---------------------------------CAVQKQGQVYNM
DI----AQKEASHCSTFKIVSTLMGLHEGVL--K----DV-NTTMGYD-GKN-QYPF---
--------DAW-----------NTD-LNLKDAFASSCVWYFRKVIDGVGQEKTAEMLKDL
GYGNCDISQWQG------SGTNGTPDLDGFWLE----------SSLKISPMEQVQVLVKI
FEEQAVF-TEEERSTLKDVM------LVE--E--------N------------EGYKVYG
KTGT-----------------G----Y--GD--------------------N--------
-------AWFVGF-V--EK----N-------GEN-E-YFAL---------RLN-----EE
SLKG-E------K---------S----MTI--------------TGG----KAKEIALK-
II------------------A--NR-----K-----------
>+2|BLARBACLI|BLAR1|no|no-Clostridium_diolis_GCF_000409695.1@WP_039769153.1
------------------------------------------------------------
-------------------------------MKK--------------------------
--------I-------TNIML--------TC------M----------------------
------------------------------------------------------------
------------ICMQ--------------------------------------------
------------------M-IGCN------------------------------------
----------------------------------------NQNSNLNDKLID--------
--------------------------NKKSL------INS--------------------
--------------FASD--NFTIK-----------------------------------
----SVD---------YSEAFNGIE--------GC-------------------------
-------AI----FL---------------------------------NNNKKEYQVYNE
EA----CKKEVSPCSTFKIISTLIGLKKGIL--T----ST-ETKMNYN-GTK-YP-I---
--------DDW-----------NRD-LNLKEAFQASCIWYFRSVIDKVGQDSMQEEINKI
HYGNCDISEWRG------RSINSFPELNGFWLE----------SSLKISPKEQVKILSNI
FDGKTDF-SNENIEILKEIM------LVD--K--------I------------NNVFVYG
KTGT-----------------G----G--ED--------------------N--------
-------AWFVGM-I--EK----G-------DEK-Y-SFAV---------HLN-----K-
-----G------K---------G----NEI--------------SGQ----KAKEIAFK-
II------------------N--QY-----YK----------
>BLARBACLI|BLAR1|no|no-Lactonifactor_longoviformis_GCF_900129135.1@WP_072849547.1
------------------------------------------------------------
-------------------M-----------IKK--------------------------
----------------FAVVL--------AA------V----------------------
------------------------------------------------------------
------------LCCN--------------------------------------------
------------------I-VGCGS-----------------------------------
-------------------------------------------------REE--------
-------------------------GEKRTA------ASAAEDSEGNTEQKEEIT-----
------IQGSRSSAAAIP--DPVWN-----------------------------------
----TAD---------YSGYFQGVQ--------GC-------------------------
-------AV----VF---------------------------------DSKEDEYQVYNE
EM----CYTQFSPCSTFKIVSTLIGLETGIL--T----GP-DTTMGYD-NTN-YP-V---

test/nonal-group_21.fasta  view on Meta::CPAN 

>+1|BLARCLODI|BLAR1|no|no-Clostridium_saccharoperbutylacetonicum_GCF_000334435.1@WP_015392970.1
------------------------------------------------------------
-------------------------------MKKK-------------------------
-------YF-------YNSLL--------IC------M----------------------
------------------------------------------------------------
------------IFMQ--------------------------------------------
------------------L-MGCN------------------------------------
----------------------------------------NQKIKLNNKSGD--------
--------------------------N-SSF------ATS--------------------
--------------ITSE--NATTK-----------------------------------
----IVD---------YSKAFNGIE--------GC-------------------------
-------AV----FY---------------------------------NNDKKEYQFYNK
EA----CEIEVSPCSSFKIISTLTGLKNGIL--T----SA-DTKMKYN-GTK-YP-L---
--------EAW-----------NKD-LTLKEAFQTSCVWYFRSVIDKVGQDSMQAELNEI
HYGNCDIREWKG------GNINLLRELNGFWLE----------SSLKISPKEQVNVLSII
FEGKTDF-SRKNIETLKEIM------LVE--R--------K------------GNISIYG
KTGT-----------------G----F--KN--------------------N--------
-------AWFVGW-L--EN----G-------SEK-Y-SFAV---------HLS-----D-
-----G------K---------G----KDI--------------SGQ----MAKEIALK-
II------------------S--EY-----Y-----------
>GCF_002006445.1|WP_077869710.1
MKKITNIMLTCMICMQMIGCNNQNANLNDKLVDNKESLTNSSTSDNFTIKAVDYSEAFSG
IQGCAIFLNDNKKEYQIYNEEACQKEVSPCSTFKIISTLIGLKKGILTSAETKMNYNGTK
YPIDDWNRDLNLKEAFQASCIWYFRSVIDKVGQDSMQEEINKIHYGNCDISEWRGRSINS
FPELNGFWLESSLKISPKEQVKILSNIFDGKTDFSNENIEILKEIMLVDKINNVFVYGKT
GTGGEDNAWFVGMIEKGDEKYSFAVHLNKGKGNEISGQKAKEIAFKIINQYYK
>GCF_000506785.3|WP_054249071.1
MLTCMICMQMIGCNNQNANLNDKLVDNKESLTNSSTSDNFTIKAVDYSEAFSGIQGCAIF
LNDNKKEYQIYNEEACEKEVSPCSTFKIISTLIGLKKGILTSAETKMNYNGTKYPIDDWN
RDLNLKEAFQASCIWYFRSVIDKVGQDSMQEEINKIHYGNCDISEWRGRSINSFPELNGF
WLESSLKISPKEQVKILSNIFDGKTDFSNENIEILKEIMLVDKINNVFVYGKTGTGGEDN
AWFVGMIEKGDEKYSFAVHLNKGKGNEISGQKAKEIAFKIINQYYK
>GCF_000340885.1|WP_015392970.1
MKKKYFYNSLLICMIFMQLMGCNNQKIKLNNKSGDNSSFATSITSENATTKIVDYSKAFN
GIEGCAVFYNNDKKEYQFYNKEACEIEVSPCSSFKIISTLTGLKNGILTSADTKMKYNGT
KYPLEAWNKDLTLKEAFQTSCVWYFRSVIDKVGQDSMQAELNEIHYGNCDIREWKGGNIN
LLRELNGFWLESSLKISPKEQVNVLSIIFEGKTDFSRKNIETLKEIMLVERKGNISIYGK
TGTGFKNNAWFVGWLENGSEKYSFAVHLSDGKGKDISGQMAKEIALKIISEYY
>GCF_000218465.1|WP_004613118.1
MKKNKSFYLLIIGILVGIFAFSGCTNHNNSDAKNIQQDTKDPTPEKFSVVESQEPTLTEV
DWSNYFEGLTGTAIVYDPTEKNYMIYNKELALTQRSPCSTFKIISSLIGLENGIIDPDNS
VRPWSGEIFWNEDWNRDINFSDAFRTSCVWYFRQVTDDIGKVKMQNELNKLKYGNCDISD
WEGKLNTNNNNRALTGFWIESSLKISPKEQVEVMERIFGTDSTYSERTQNILKQVMLISE
ENNTEISIYGKTGMGKAEGIVVDAWFTGFAETLEGNKYFCVYLGQSDAGNTSSTAAKEIA
IQILNDNK
>GCF_000424345.1|WP_004613118.1
MKKNKSFYLLIIGILVGIFAFSGCTNHNNSDAKNIQQDTKDPTPEKFSVVESQEPTLTEV
DWSNYFEGLTGTAIVYDPTEKNYMIYNKELALTQRSPCSTFKIISSLIGLENGIIDPDNS
VRPWSGEIFWNEDWNRDINFSDAFRTSCVWYFRQVTDDIGKVKMQNELNKLKYGNCDISD
WEGKLNTNNNNRALTGFWIESSLKISPKEQVEVMERIFGTDSTYSERTQNILKQVMLISE
ENNTEISIYGKTGMGKAEGIVVDAWFTGFAETLEGNKYFCVYLGQSDAGNTSSTAAKEIA
IQILNDNK
>GCF_900036035.1|WP_064786658.1
MIGILVGIFAFSGCTNHNNSDAKNIQQDTKDPTPEKFSVVESQEPTLTEVDWSNYFEGLT
GTAIVYDPTEKNYMIYNKELALTQRSPCSTFKIISSLIGLENGIIDPDNSVRPWSGEIFW
NEDWNRDINFSDAFRTSCVWYFRQVTDDIGKVKMQNELNKLKYGNCDISDWEGKLNTNNN
NRALTGFWIESSLKISPKEQVEVMERIFGTDSTYSERTQNILKQVMLISEENNTEISIYG
KTGMGKAEGIVVDAWFTGFAETLEGNKYFCVYLGQSDAGNTSSTAAKEIAIQILNDNK
>GCF_000466465.2|WP_021633768.1
MSKRGKSKRSHRCAVFLSVVLCAGLFTGCGDKKAVEISTGSTAAEKDVRNPYDGQSIDEQ
PNITETDTPPAEPHQASPENAAQENVDYSEAFGGLNGCAVVFDPQEQVCRFYNKTLCETA
VSPCSTFKIVSALMGLKYHVLENENSTMGYDGTQYGNAAWNQDLSLKDAFQSSCVWYFRK
VIDQVGQERVKEELTALDYGNCNISEWAGSGINPGEELNGFWLASSLKISPYGQVRVLSD
IFEGRTGFSPEHVKIVKNIMSADGGGIYGKTGTGTKGQAWFVGFSESEEKRTYFAVYLED
TDNREQVSSKKAKEIALKIIGQ
>GCF_000378365.1|WP_018999519.1
MFKTLVKIICVITICLFTTNCTSAENSTSSSNQNTSMQTTQTTKNSIDLSSYFENINGTA
VFYTPDINTYNIYNDELSTKQSSPCSTFKIFSTYVALDNKTIDINNSLRKWNGTIYWYDA
WNKDIDLDTAFKTSCVWYYRQVIDEIGQDTMQKYIDKFDYGNKDISDWDGKTDLDDDPRD
LKGFWLETSLKISPLEQVQLLNRLFSTNENPMALAKLKELMLVYEDNNTGLKIYGKTGFG
KVNGENTDAWFTGFYEINNQQTYYSVRLDDPKNPQALSSTAKEIAINIIKNLNK
>GCF_001717125.1|WP_069157524.1
MKTGSYTGLRFIGCLLFLLCIISMSGCVGKAELAQETGALSGEGAGTGEETGAGQQENEE
KPDITEESVKESLSEAVSIDIAEEKEVDADYSQAFQGINGCAVVYVPEDNSSYFYNKEMC
TEQASPYSTFKIISALMGLHNGVIADETSAMEYNGTQYYNSAWNKDLSLREAFQTSCIWY
SRQVIDAVGSAEVKKELEELRYGNCNITEWEGGDVNPLPELNGFWLDSSLRISPWEQVQV
LARIFEGGSSYTEEETQILRSVMQNDMENRTILYGKTGTGPDGEGWFVGFVQNGEQNKYF
AVYLNDPGNQETANGKKAKEIAEIIMRE
>GCF_001881565.1|WP_069157524.1
MKTGSYTGLRFIGCLLFLLCIISMSGCVGKAELAQETGALSGEGAGTGEETGAGQQENEE
KPDITEESVKESLSEAVSIDIAEEKEVDADYSQAFQGINGCAVVYVPEDNSSYFYNKEMC
TEQASPYSTFKIISALMGLHNGVIADETSAMEYNGTQYYNSAWNKDLSLREAFQTSCIWY
SRQVIDAVGSAEVKKELEELRYGNCNITEWEGGDVNPLPELNGFWLDSSLRISPWEQVQV
LARIFEGGSSYTEEETQILRSVMQNDMENRTILYGKTGTGPDGEGWFVGFVQNGEQNKYF
AVYLNDPGNQETANGKKAKEIAEIIMRE
>GCF_000245775.1|WP_008537584.1
MFKILAKIICVITICLFTTNCTSAENSTSSSNQNTSMQTTQTTKNSIDLSSYFENINGTA
VFYTPDTNTYNIYNDELSTKQSSPCSTFKIFSTYVALDNKTIDANNSLRKWNGTIYWYDA
WNKDIDLDTAFKTSCVWYYRQVIDEIGQDTMQKYIDKFDYGNKDISDWDGKTDLDDDPRD
LKGFWLGTSLKISPLEQVQLLNRLFSANENPMALAKLKELMLVYEDNNTGLKIYGKTGFG
KVNGENIDAWFTGFYEINNQRTYYSVRLDDPKNPQALSSTAKEIAINIIKNLNK
>GCF_000235825.1|WP_003426266.1
MKRKNNFIWIVILLVVVAMGIYYVGRKHNNTKQKYDKNYINSELNKSKIENNDKNKKEKI
NIVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCSTFKIVSTLIGLEKGVINS
KESVMGYDGTNYPNKNWNKNLSLEEAFKESCVWYYKKLINKVDAKSVQNILDDLKYGNCD
ISEWEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKIFEGDTNFKKEHINILKDIMKID
VNDKNINVYGKTGTGFDEKNKRVDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIA
INIIKKYYSVRE
>GCF_000235925.1|WP_003426266.1
MKRKNNFIWIVILLVVVAMGIYYVGRKHNNTKQKYDKNYINSELNKSKIENNDKNKKEKI
NIVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCSTFKIVSTLIGLEKGVINS
KESVMGYDGTNYPNKNWNKNLSLEEAFKESCVWYYKKLINKVDAKSVQNILDDLKYGNCD
ISEWEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKIFEGDTNFKKEHINILKDIMKID
VNDKNINVYGKTGTGFDEKNKRVDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIA
INIIKKYYSVRE
>GCF_000449525.2|WP_003426266.1
MKRKNNFIWIVILLVVVAMGIYYVGRKHNNTKQKYDKNYINSELNKSKIENNDKNKKEKI
NIVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCSTFKIVSTLIGLEKGVINS
KESVMGYDGTNYPNKNWNKNLSLEEAFKESCVWYYKKLINKVDAKSVQNILDDLKYGNCD
ISEWEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKIFEGDTNFKKEHINILKDIMKID
VNDKNINVYGKTGTGFDEKNKRVDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIA
INIIKKYYSVRE
>GCF_000449945.2|WP_003426266.1
MKRKNNFIWIVILLVVVAMGIYYVGRKHNNTKQKYDKNYINSELNKSKIENNDKNKKEKI
NIVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCSTFKIVSTLIGLEKGVINS
KESVMGYDGTNYPNKNWNKNLSLEEAFKESCVWYYKKLINKVDAKSVQNILDDLKYGNCD
ISEWEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKIFEGDTNFKKEHINILKDIMKID
VNDKNINVYGKTGTGFDEKNKRVDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIA
INIIKKYYSVRE
>GCF_000452125.2|WP_003426266.1
MKRKNNFIWIVILLVVVAMGIYYVGRKHNNTKQKYDKNYINSELNKSKIENNDKNKKEKI



( run in 0.865 second using v1.01-cache-2.11-cpan-6fb7bf0f510 )