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test/GNTPAN12210_hmm.ali  view on Meta::CPAN

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>Homo sapiens@ENSP00000225916
                                                                                       GGDPARPGLSQQQ**RASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPK*****P*PTAPRMDLQQPAANLSELCRSCEHPLA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMTRPVVEGSL...
>Homo sapiens@ENSP00000456712
                                                                                       GGDPARPGLSQQQ**RASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPK*****P*PTAPRMDLQQPAANLSELCRSCEHPLA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMTRPVVEGSL...
>L oxodonta_africana@ENSLAFP00000006713_that is really long with strange stuff
                                                                                       GGDPARPGLSQQQ**RASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPK*****P*PTAPRMDLQQPAANLSELCRSCEHPLA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMTRPVVEGSL...
>Canis familiaris@ENSCAFP00000023075
                                                                                       GGDPARPGLSQQQ**RASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPK*****P*PTAPRMDLQQPAANLSELCRSCEHPLA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMTRPVVEGSL...
>Mus musculus@ENSMUSP00000098017
                                                                  GSGGAGVG************SGGDPARPGLSQQQ**RASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPK*****P*PTAPRMDLQQPAANLSELCRSCEHPLA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFK******************...
>Monodelphis domestica@ENSMODP00000018493
***************************************************************GAPGSGTPGVGSGAPG*******AGGDPARPGLSQQQ**RASQRKAQVRALPRAKKLEKLGVFSACKANDACKCNGWKNPK*****P*PTAPRMDLQQPAANLSEACRSCEHPLA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMTRPVVEGSL...
>Macropus eugenii@ENSMEUP00000005117
                                                                                      AGGDPARPGLSQQQ**RASQRKAQVRALPRAKKLEKLGVFSACKANDACKCNGWKNPK*****P*PTAPRMDLQQPAANLSEACRSCEHPLA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMTRPVVEGSL...
>Ornithorhynchus anatinus@ENSOANP00000015773
*********************************************************************************************************************************************************************************A*DHVSH*LENVSEDEISRLLGMVVDVENLFMSV***HKEEDTDPKQVY*FL*********************...
>Xenopus tropicalis@ENSXETP00000004923
                                                                                         DPARPGLSQQQ**RASQRKAQVRALPRAKKLEKLGVFSACKANDLCKCNGWKNPN*****P*QTAPRMDLQQPAASLTEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMIRPVVEGSL...
>Meleagris gallopavo@ENSMGAP00000006789
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000005317
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCSHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Taeniopygia guttata@ENSTGUP00000002617
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCGHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Anolis carolinensis@ENSACAP00000017686
                                                                                         DPVRPGLSQQQ**RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN*****P*PTAPRMDLQQTVTNLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Protopterus annectens@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens@comp301579_c0_seq1
                                                                                         DPARPGLSQQQ**RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN*****P*ATAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSDDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Latimeria chalumnae@ENSLACP00000012334
                                                                                       GSDPARPGLSQQQ**RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PTAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKSILQMSRPVVEGSL...
>Danio rerio@ENSDARP00000011795
                                                                                         DPARPGLSQQQ**WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN*****P*PTAARMELQQQAASLTETCRSCGHSLA*EHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Oreochromis niloticus@ENSONIP00000001395
                                                                      AGSGS***********GNSDPVRPGLSQQQ**RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PSATRIDLQQQAASLSEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Homo sapiens@ENSP00000263754
                                                                                                           KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Mus musculus@ENSMUSP00000000724
                                                                                                           KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRGDLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMDRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Canis familiaris@ENSCAFP00000008685
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHAL                                                       LLRKSILQRGKPVVEGSL...
>Loxodonta africana@ENSLAFP00000005288
**********************************************************************************************************EEGAARAPLRWPELEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILHRGKPVVEGSL...
>Dasypus novemcinctus@ENSDNOP00000011162
**********************************************************************************************************************************AEESCKCNGWKNPN*****PSPTPPRADLQHIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKXXXXXXXXXXXXXXXXXX...
>Monodelphis domestica@ENSMODP00000032522
***********************************************************************************************GASTA**RIAVKKAQLRSAPRAKKLEKLGVYSSCKAEESCKCNGWKNPN*****PPPTPPRADLQQIIVNLTESCRSCSHALA*AHVSH*LENVAEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Macropus eugenii@ENSMEUP00000013271
**********************************************************************************************************************************AEESCKCNGWKNPN*****PPPTPPRADVQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPIVEGSL...
>Ornithorhynchus anatinus@ENSOANP00000007907
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQTIVNLTESCRSCSHALA*AHVSH*LENESEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Anolis carolinensis@ENSACAP00000000014
**********************************************************************************************************************************************************************************************************************************************************...
>Meleagris gallopavo@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000018380
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Meleagris gallopavo@ENSMGAP00000011414
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Taeniopygia guttata@ENSTGUP00000003370
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRAELQQAAASLAEPCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Xenopus tropicalis@ENSXETP00000030583
                                                                                                             QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN*****PPPTPPKMDLQQTVVSLAEPCRSCGHTLA*AHVSH*LENVSEEEMNRLLGIVLDIEYLFTCV***HKEEDADTKQVY*FCLFKLLRKCILQMVKPAVEGSL...
>Latimeria chalumnae@ENSLACP00000007242
                                                                                                           KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN*****PPPTPPRVDLQQTVGSLTEPCRSCSHTLA*DHVSH*LENVLEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPAVEGSL...
>Danio rerio@ENSDARP00000085190
                                                                                                           KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE*QPTAVSLMEPCRSCSHALG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCV***HKEEDPDTKQVY*FSLFKLLRKCILQMGRPVVE*AL...
>Oreochromis niloticus@ENSONIP00000003026
                                                                                                           KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN*****PPPTPPQTEQQSNAVNLQEPCRSCSHTLG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCI***HKEEDADTKQVY*FSLFKLLRKSILQMGKPMLEAQ*...