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t/data/sv40_small.xml  view on Meta::CPAN

             <names>
               <shortLabel>sv40</shortLabel>
               <fullName>Simian virus 40</fullName>
             </names>
           </organism>
           <sequence>MDKVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSDDEATADSQHSTPPKKKRKVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEKYSVTFISRHNSYNHNILFFLTPHRHRVSAINNYAQKLCTFSFLICKGVNKE...
         </proteinInteractor>
         <proteinInteractor id="EBI-474016">
           <names>
             <shortLabel>p53_mouse</shortLabel>
             <fullName>Cellular tumor antigen p53</fullName>
           </names>
           <xref>
             <primaryRef db="uniprotkb" id="P02340" secondary="p53_mouse" version="SP_48"/>
             <secondaryRef db="go" id="GO:0005829" secondary="C:cytosol"/>
             <secondaryRef db="go" id="GO:0005739" secondary="C:mitochondrion"/>
             <secondaryRef db="go" id="GO:0005730" secondary="C:nucleolus"/>
             <secondaryRef db="go" id="GO:0005524" secondary="F:ATP binding"/>
             <secondaryRef db="go" id="GO:0005507" secondary="F:copper ion binding"/>
             <secondaryRef db="go" id="GO:0000739" secondary="F:DNA strand annealing activit"/>
             <secondaryRef db="go" id="GO:0005515" secondary="F:protein binding"/>
             <secondaryRef db="go" id="GO:0003700" secondary="F:transcription factor activit"/>
             <secondaryRef db="go" id="GO:0006915" secondary="P:apoptosis"/>
             <secondaryRef db="go" id="GO:0006284" secondary="P:base-excision repair"/>
             <secondaryRef db="go" id="GO:0008635" secondary="P:caspase activation via cytoc"/>
             <secondaryRef db="go" id="GO:0007569" secondary="P:cell aging"/>
             <secondaryRef db="go" id="GO:0007050" secondary="P:cell cycle arrest"/>
             <secondaryRef db="go" id="GO:0030154" secondary="P:cell differentiation"/>
             <secondaryRef db="go" id="GO:0042771" secondary="P:DNA damage response, signal"/>
             <secondaryRef db="go" id="GO:0043066" secondary="P:negative regulation of apopt"/>
             <secondaryRef db="go" id="GO:0030308" secondary="P:negative regulation of cell"/>
             <secondaryRef db="go" id="GO:0008156" secondary="P:negative regulation of DNA r"/>
             <secondaryRef db="go" id="GO:0048147" secondary="P:negative regulation of fibro"/>
             <secondaryRef db="go" id="GO:0006289" secondary="P:nucleotide-excision repair"/>
             <secondaryRef db="go" id="GO:0000060" secondary="P:protein-nucleus import, tran"/>
             <secondaryRef db="go" id="GO:0042127" secondary="P:regulation of cell prolifera"/>
             <secondaryRef db="go" id="GO:0006355" secondary="P:regulation of transcription,"/>
             <secondaryRef db="go" id="GO:0006974" secondary="P:response to DNA damage stimu"/>
             <secondaryRef db="go" id="GO:0009411" secondary="P:response to UV"/>
             <secondaryRef db="go" id="GO:0010165" secondary="P:response to X-ray"/>
             <secondaryRef db="interpro" id="IPR002117" secondary="P53"/>
             <secondaryRef db="interpro" id="IPR011615" secondary="p53_DNA_bind"/>
             <secondaryRef db="interpro" id="IPR010991" secondary="p53_tetrameristn"/>
             <secondaryRef db="uniprotkb" id="Q9QUP3" secondary="p53_mouse" version="SP_48"/>
             <secondaryRef db="go" id="GO:0005657" secondary="C:replication fork"/>
             <secondaryRef db="go" id="GO:0045941" secondary="P:positive regulation of trans"/>
             <secondaryRef db="interpro" id="IPR012346" secondary="P53_RUNT_DNA_bd"/>
             <secondaryRef db="intact" id="EBI-474016" secondary="p53_mouse"/>
           </xref>
           <organism ncbiTaxId="10090">
             <names>
               <shortLabel>mouse</shortLabel>
               <fullName>Mus musculus</fullName>
             </names>
           </organism>
           <sequence>MTAMEESQSDISLELPLSQETFSGLWKLLPPEDILPSPHCMDDLLLPQDVEEFFEGPSEALRVSGAPAAQDPVTETPGPVAPAPATPWPLSSFVPSQKTYQGNYGFHLGFLQSGTAKSVMCTYSPPLNKLFCQLAKTCPVQLWVSATPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCSDGDGLAPPQHLIRVEGNLYPEYLEDRQTFRHSVVVPYEPPEAGSEYTTI...
         </proteinInteractor>
         <proteinInteractor id="EBI-617321">
           <names>
             <shortLabel>epor_human</shortLabel>
             <fullName>Erythropoietin receptor precursor</fullName>
           </names>
           <xref>
             <primaryRef db="uniprotkb" id="P19235" secondary="epor_human" version="SP_48"/>
             <secondaryRef db="go" id="GO:0005887" secondary="C:integral to plasma membrane"/>
             <secondaryRef db="go" id="GO:0004900" secondary="F:erythropoietin receptor acti"/>
             <secondaryRef db="go" id="GO:0007165" secondary="P:signal transduction"/>
             <secondaryRef db="interpro" id="IPR002996" secondary="Cytkn_recept_B/G"/>
             <secondaryRef db="interpro" id="IPR009167" secondary="EPO_receptor"/>
             <secondaryRef db="interpro" id="IPR003961" secondary="FN_III"/>
             <secondaryRef db="interpro" id="IPR008957" secondary="FN_III-like"/>
             <secondaryRef db="interpro" id="IPR003528" secondary="HemptreceptL_F1"/>
             <secondaryRef db="uniprotkb" id="Q15443" secondary="epor_human" version="SP_48"/>
             <secondaryRef db="intact" id="EBI-617321" secondary="epor_human"/>
           </xref>
           <organism ncbiTaxId="9606">
             <names>
               <shortLabel>human</shortLabel>
               <fullName>Homo sapiens</fullName>
             </names>
           </organism>
           <sequence>MDHLGASLWPQVGSLCLLLAGAAWAPPPNLPDPKFESKAALLAARGPEELLCFTERLEDLVCFWEEAASAGVGPGNYSFSYQLEDEPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSF...
         </proteinInteractor>
         <proteinInteractor id="EBI-617489">
           <names>
             <shortLabel>cish_mouse</shortLabel>
             <fullName>Cytokine-inducible SH2-containing protein</fullName>
           </names>
           <xref>
             <primaryRef db="uniprotkb" id="Q62225" secondary="cish_mouse" version="SP_48"/>
             <secondaryRef db="go" id="GO:0005886" secondary="C:plasma membrane"/>
             <secondaryRef db="go" id="GO:0005515" secondary="F:protein binding"/>
             <secondaryRef db="go" id="GO:0007205" secondary="P:protein kinase C activation"/>
             <secondaryRef db="interpro" id="IPR000980" secondary="SH2"/>
             <secondaryRef db="interpro" id="IPR001496" secondary="SOCS_C"/>
             <secondaryRef db="intact" id="EBI-617489" secondary="cish_mouse"/>
           </xref>
           <organism ncbiTaxId="10090">
             <names>
               <shortLabel>mouse</shortLabel>
               <fullName>Mus musculus</fullName>
             </names>
           </organism>
           <sequence>MVLCVQGSCPLLAVEQIGRRPLWAQSLELPGPAMQPLPTGAFPEEVTEETPVQAENEPKVLDPEGDLLCIAKTFSYLRESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSSFRLDSNCLSRPRILAFPDVVSLVQHYVASCAADTRSDSPDPAPTPALPMSKQDAPSDSVLPIPVATAVHLKLVQPFVRRSSARSLQHLCRLV...
         </proteinInteractor>
         <proteinInteractor id="EBI-617737">
           <names>
             <shortLabel>socs2_human</shortLabel>
             <fullName>Suppressor of cytokine signaling 2</fullName>
           </names>
           <xref>
             <primaryRef db="uniprotkb" id="O14508" secondary="socs2_human" version="SP_49"/>
             <secondaryRef db="go" id="GO:0005737" secondary="C:cytoplasm"/>
             <secondaryRef db="go" id="GO:0005131" secondary="F:growth hormone receptor bind"/>
             <secondaryRef db="go" id="GO:0005159" secondary="F:insulin-like growth factor r"/>
             <secondaryRef db="go" id="GO:0008269" secondary="F:JAK pathway signal transduct"/>
             <secondaryRef db="go" id="GO:0005148" secondary="F:prolactin receptor binding"/>
             <secondaryRef db="go" id="GO:0005070" secondary="F:SH3/SH2 adaptor activity"/>
             <secondaryRef db="go" id="GO:0006916" secondary="P:anti-apoptosis"/>
             <secondaryRef db="go" id="GO:0007259" secondary="P:JAK-STAT cascade"/>
             <secondaryRef db="go" id="GO:0045666" secondary="P:positive regulation of neuro"/>