BioPerl
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Query: 240 MIPKNETVMAGYIVSTGPLAIAADAV--EWQFYIGGVFDIP-CNPNSLDHGILIVGYSAK 296
IP +E + + GP+++A DA +QFY G++ P C L+H +L+VGY +
Sbjct: 227 QIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFE 286
Query: 297 NTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG-KNTCGVSNFVSTSII 343
N +W+VKNSWG +WG +GY+ L + N CG++ + + I+
Sbjct: 287 GEESDGN-SFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333
>sp|P25776|ORYA_ORYSA ORYZAIN ALPHA CHAIN PRECURSOR
Length = 458
Score = 198 bits (497), Expect = 2e-50
Identities = 122/348 (35%), Positives = 182/348 (52%), Gaps = 37/348 (10%)
Query: 3 VILLFVLAVFTVFVSSRGIPPEEQSQ--FLEFQDKFNKKYSHE-EYLERFEIFKSNLGKI 59
++LL LA + + S G EE+++ + E++ + K Y+ E R+ F+ NL I
Sbjct: 12 LLLLLSLAAADMSIVSYGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYI 71
Query: 60 EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-----NKEAIFTDDLPVADYLDDEF 114
+E N A + G+N+FADL+++E+++ YL +E +D AD
Sbjct: 72 DEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADN----- 126
Query: 115 INSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCD 174
++P + DWRT+GAV +K+QG CGSCW+FS VE + I L+SLSEQ LVDCD
Sbjct: 127 -EALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEDINQIVTGDLISLSEQELVDCD 185
Query: 175 HECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIG-A 233
+ +EGCNGGL A+++II NGGI TE YPY + +C+ N N
Sbjct: 186 ---------TSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGK-DERCDVNRKNAKVV 235
Query: 234 KISNFTMIPKNETVMAGYIVSTGPLAIAADA--VEWQFYIGGVFDIPCNPNSLDHGILIV 291
I ++ + N V P+++A +A +Q Y G+F C +LDHG+ V
Sbjct: 236 TIDSYEDVTPNSETSLQKAVRNQPVSVAIEAGGRAFQLYSSGIFTGKCG-TALDHGVAAV 294
Query: 292 GYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRR----GKNTCGVS 335
GY +N YWIV+NSWG WGE GY+ + R CG++
Sbjct: 295 GYGTEN-----GKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIA 337
>sp|P14080|PAP2_CARPA CHYMOPAPAIN PRECURSOR (PAPAYA PROTEINASE II) (PPII)
Length = 352
Score = 194 bits (488), Expect = 2e-49
Identities = 125/315 (39%), Positives = 167/315 (52%), Gaps = 43/315 (13%)
Query: 35 KFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKF--GVNKFADLSSDEFKNY 91
K NK Y S +E + RFEIF+ NL I+E N K + + G+N FADLS+DEFK
Sbjct: 54 KHNKIYESIDEKIYRFEIFRDNLMYIDETN------KKNNSYWLGLNGFADLSNDEFKKK 107
Query: 92 YLNNKEAIFTDDLPVADYLDDE-----FINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFS 146
Y+ +D ++ D+E + + P + DWR +GAVTPVKNQG CGSCW+FS
Sbjct: 108 YVG----FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFS 163
Query: 147 TTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNG 206
T VEG + I L+ LSEQ LVDCD GC GG Q + Y + N
Sbjct: 164 TIATVEGINKIVTGNLLELSEQELVDCDKH----------SYGCKGGYQTTSLQY-VANN 212
Query: 207 GIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKN-ETVMAGYIVSTGPLAIAADA- 264
G+ T YPY A+ + KI+ + +P N ET G + + PL++ +A
Sbjct: 213 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSVLVEAG 271
Query: 265 -VEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYI 323
+Q Y GVFD PC LDH + VGY + KN Y I+KNSWG +WGE+GY+
Sbjct: 272 GKPFQLYKSGVFDGPCG-TKLDHAVTAVGYGTSD---GKN--YIIIKNSWGPNWGEKGYM 325
Query: 324 YLRR----GKNTCGV 334
L+R + TCGV
Sbjct: 326 RLKRQSGNSQGTCGV 340
>sp|P43235|CATK_HUMAN CATHEPSIN K PRECURSOR (CATHEPSIN O) (CATHEPSIN X) (CATHEPSIN O2)
Length = 329
Score = 194 bits (488), Expect = 2e-49
Identities = 121/339 (35%), Positives = 180/339 (52%), Gaps = 25/339 (7%)
Query: 9 LAVFTVFVSSRGIPPEE--QSQFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLI 65
L V + V S + PEE + + ++ K+Y+++ + + R I++ NL I NL
Sbjct: 4 LKVLLLPVVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLE 63
Query: 66 AINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPTAFDWR 125
A + +N D++S+E K + Y+ E+ P + D+R
Sbjct: 64 ASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIP-EWEGRAPDSVDYR 122
Query: 126 TRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEA 185
+G VTPVKNQGQCGSCW+FS+ G +EGQ KL++LS QNLVDC E
Sbjct: 123 KKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--------- 173
Query: 186 CDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPK-N 244
++GC GG NA+ Y+ KN GI +E +YPY + C +N AK + IP+ N
Sbjct: 174 -NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTGKAAKCRGYREIPEGN 231
Query: 245 ETVMAGYIVSTGPLAIAADA--VEWQFYIGGV-FDIPCNPNSLDHGILIVGYSAKNTIFR 301
E + + GP+++A DA +QFY GV +D CN ++L+H +L VGY +
Sbjct: 232 EKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG-----IQ 286
Query: 302 KNMPYWIVKNSWGADWGEQGYIYLRRGK-NTCGVSNFVS 339
K +WI+KNSWG +WG +GYI + R K N CG++N S
Sbjct: 287 KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325
>sp|P25778|ORYC_ORYSA ORYZAIN GAMMA CHAIN PRECURSOR
Length = 362
Score = 194 bits (487), Expect = 3e-49
Identities = 114/327 (34%), Positives = 171/327 (51%), Gaps = 37/327 (11%)
Query: 28 QFLEFQDKFNKKYSHE-EYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSD 86
+F F + K+Y E RF IF +L + N + ++ G+N+FAD+S +
Sbjct: 61 RFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYR----LGINRFADMSWE 116
Query: 87 EFKNYYLN---NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCW 143
EF+ L N A + + D ++P DWR G V+PVK+QG CGSCW
Sbjct: 117 EFQASRLGAAQNCSATLAGNHRMRD------APALPETKDWREDGIVSPVKDQGHCGSCW 170
Query: 144 SFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYII 203
FSTTG++E ++ + VSLSEQ L DC + GC+GGL A+ YI
Sbjct: 171 PFSTTGSLEARYTQATGPPVSLSEQQLADCATRYNNF--------GCSGGLPSQAFEYIK 222
Query: 204 KNGGIQTESSYPYTAETGTQCNFNSANIGAKI---SNFTMIPKNETVMAGYIVSTGPLAI 260
t/data/psiblastreport.out view on Meta::CPAN
++Q Y GG+F+ C +DH + VGY Y ++KNSWG WGE GYI +
Sbjct: 272 DFQNYKGGIFEGSCG-TKVDHAVTAVGYGKSG-----GKGYILIKNSWGPGWGENGYIRI 325
Query: 326 RRGKNT----CGVSNFVSTSI 342
RR CGV I
Sbjct: 326 RRASGNSPGVCGVYRSSYYPI 346
>sp|P10056|PAP3_CARPA CARICAIN PRECURSOR (PAPAYA PROTEINASE OMEGA) (PAPAYA PROTEINASE
III) (PPIII) (PAPAYA PEPTIDASE A)
Length = 348
Score = 341 bits (865), Expect = 1e-93
Identities = 114/317 (35%), Positives = 162/317 (50%), Gaps = 26/317 (8%)
Query: 29 FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87
F + NK Y + +E L RFEIFK NL I+E N ++ G+N+FADLS+DE
Sbjct: 48 FNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYW----LGLNEFADLSNDE 103
Query: 88 FKNYYLNNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFST 147
F Y+ + + ++++++ +N +P DWR +GAVTPV++QG CGSCW+FS
Sbjct: 104 FNEKYVGSLIDATIEQSYDEEFINEDTVN-LPENVDWRKKGAVTPVRHQGSCGSCWAFSA 162
Query: 148 TGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGG 207
VEG + I KLV LSEQ LVDC+ GC GG P A Y+ KN G
Sbjct: 163 VATVEGINKIRTGKLVELSEQELVDCERR----------SHGCKGGYPPYALEYVAKN-G 211
Query: 208 IQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADA--V 265
I S YPY A+ GT K S + N ++ P+++ ++
Sbjct: 212 IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGR 271
Query: 266 EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYL 325
+Q Y GG+F+ PC +DH + VGY Y ++KNSWG WGE+GYI +
Sbjct: 272 PFQLYKGGIFEGPCG-TKVDHAVTAVGYGKSG-----GKGYILIKNSWGTAWGEKGYIRI 325
Query: 326 RRG-KNTCGVSNFVSTS 341
+R N+ GV +S
Sbjct: 326 KRAPGNSPGVCGLYKSS 342
>sp|P14080|PAP2_CARPA CHYMOPAPAIN PRECURSOR (PAPAYA PROTEINASE II) (PPII)
Length = 352
Score = 339 bits (860), Expect = 6e-93
Identities = 119/321 (37%), Positives = 160/321 (49%), Gaps = 29/321 (9%)
Query: 29 FLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87
F + K NK Y S +E + RFEIF+ NL I+E N ++ G+N FADLS+DE
Sbjct: 48 FDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYW----LGLNGFADLSNDE 103
Query: 88 FKNYYLNNKEAIFTDDLP-VADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFS 146
FK Y+ FT + + + + P + DWR +GAVTPVKNQG CGSCW+FS
Sbjct: 104 FKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFS 163
Query: 147 TTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNG 206
T VEG + I L+ LSEQ LVDCD GC GG Q + Y+ N
Sbjct: 164 TIATVEGINKIVTGNLLELSEQELVDCDKH----------SYGCKGGYQTTSLQYVANN- 212
Query: 207 GIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADA-- 264
G+ T YPY A+ + KI+ + +P N ++ PL++ +A
Sbjct: 213 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGG 272
Query: 265 VEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIY 324
+Q Y GVFD PC LDH + VGY + Y I+KNSWG +WGE+GY+
Sbjct: 273 KPFQLYKSGVFDGPCG-TKLDHAVTAVGYGTSD-----GKNYIIIKNSWGPNWGEKGYMR 326
Query: 325 LRR----GKNTCGVSNFVSTS 341
L+R + TCGV
Sbjct: 327 LKRQSGNSQGTCGVYKSSYYP 347
>sp|P00784|PAPA_CARPA PAPAIN PRECURSOR (PAPAYA PROTEINASE I) (PPI)
Length = 345
Score = 334 bits (848), Expect = 1e-91
Identities = 107/321 (33%), Positives = 152/321 (47%), Gaps = 32/321 (9%)
Query: 29 FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87
F + K NK Y + +E + RFEIFK NL I+E N ++ G+N FAD+S+DE
Sbjct: 48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYW----LGLNVFADMSNDE 103
Query: 88 FKNYYLNNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFST 147
FK Y + +T + + ++ +IP DWR +GAVTPVKNQG CGSCW+FS
Sbjct: 104 FKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSA 163
Query: 148 TGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGG 207
+EG I L SEQ L+DCD GCNGG +A + + G
Sbjct: 164 VVTIEGIIKIRTGNLNEYSEQELLDCDRR----------SYGCNGGYPWSALQLVAQ-YG 212
Query: 208 IQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAV-- 265
I ++YPY + AK + Y ++ P+++ +A
Sbjct: 213 IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGK 272
Query: 266 EWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYL 325
++Q Y GG+F PC N +DH + VGY Y ++KNSWG WGE GYI +
Sbjct: 273 DFQLYRGGIFVGPCG-NKVDHAVAAVGYG---------PNYILIKNSWGTGWGENGYIRI 322
Query: 326 RRGKNT----CGVSNFVSTSI 342
+RG CG+ +
Sbjct: 323 KRGTGNSYGVCGLYTSSFYPV 343
>sp|P22895|P34_SOYBN P34 PROBABLE THIOL PROTEASE PRECURSOR
Length = 379
Score = 331 bits (840), Expect = 1e-90
Identities = 109/334 (32%), Positives = 169/334 (49%), Gaps = 33/334 (9%)
Query: 24 EEQSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFAD 82
+ S F ++ + + Y +HEE +R EIFK+N I ++N + G+NKFAD
Sbjct: 39 QVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNA-NRKSPHSHRLGLNKFAD 97
Query: 83 LSSDEFKNYYLNNKEAIFTDDLPVADYLDDE--FINSIPTAFDWRTRGAVTPVKNQGQCG 140
++ EF YL + + + E + P ++DWR +G +T VK QG CG
Sbjct: 98 ITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCG 157
Query: 141 SCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYN 200
W+FS TG +E H I+ LVSLSEQ LVDC E EG G Q ++
Sbjct: 158 RGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVEE----------SEGSYNGWQYQSFE 207
Query: 201 YIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNF-TMIPKNE------TVMAGYIV 253
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