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t/data/gb_result.xml  view on Meta::CPAN

        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>CDD:140596</GBQualifier_value>
        </GBQualifier>
      </GBFeature_quals>
    </GBFeature>
    <GBFeature>
      <GBFeature_key>CDS</GBFeature_key>
      <GBFeature_location>1..193</GBFeature_location>
      <GBFeature_intervals>
        <GBInterval>
          <GBInterval_from>1</GBInterval_from>
          <GBInterval_to>193</GBInterval_to>
          <GBInterval_accession>CAB02640.1</GBInterval_accession>
        </GBInterval>
      </GBFeature_intervals>
      <GBFeature_quals>
        <GBQualifier>
          <GBQualifier_name>gene</GBQualifier_name>
          <GBQualifier_value>pyrR</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>locus_tag</GBQualifier_name>
          <GBQualifier_value>Rv1379</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>coded_by</GBQualifier_name>
          <GBQualifier_value>BX842576.1:169611..170192</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>note</GBQualifier_name>
          <GBQualifier_value>Rv1379, (MTCY02B12.13), len: 193 aa. Probable pyrR, pyrimidine operon regulatory protein, similar to PYRR_BACCL|P41007 pyrimidine operon regulatory protein from Bacillus caldolyticus (179 aa), FASTA scores: opt: 544, E():...
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>transl_table</GBQualifier_name>
          <GBQualifier_value>11</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>GOA:P65941</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>InterPro:IPR000836</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>InterPro:IPR002375</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>PDB:1W30</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>UniProtKB/Swiss-Prot:P65941</GBQualifier_value>
        </GBQualifier>
      </GBFeature_quals>
    </GBFeature>
  </GBSeq_feature-table>
  <GBSeq_sequence>mgaagdaaigresrelmsaadvgrtisriahqiiektalddpvgpdaprvvllgiptrgvtlanrlagniteysgihvghgalditlyrddlmikpprplastsipaggiddalvilvddvlysgrsvrsaldalrdvgrpravqlavlvdrghrelplradyvgknvptsrsesvhvrlrehdgrdgvvisr</GBSeq_sequence>
</GBSeq>

<GBSeq>
  <GBSeq_locus>EAS10332</GBSeq_locus>
  <GBSeq_length>193</GBSeq_length>
  <GBSeq_moltype>AA</GBSeq_moltype>
  <GBSeq_topology>linear</GBSeq_topology>
  <GBSeq_division>BCT</GBSeq_division>
  <GBSeq_update-date>09-APR-2007</GBSeq_update-date>
  <GBSeq_create-date>09-MAR-2006</GBSeq_create-date>
  <GBSeq_definition>Phosphoribosyltransferase [Mycobacterium gilvum PYR-GCK]</GBSeq_definition>
  <GBSeq_primary-accession>EAS10332</GBSeq_primary-accession>
  <GBSeq_accession-version>EAS10332.1</GBSeq_accession-version>
  <GBSeq_other-seqids>
    <GBSeqid>gb|EAS10332.1|</GBSeqid>
    <GBSeqid>gnl|WGS:AAPA|MflvDRAFT_2382</GBSeqid>
    <GBSeqid>gi|89318838</GBSeqid>
  </GBSeq_other-seqids>
  <GBSeq_project>15760</GBSeq_project>
  <GBSeq_source>Mycobacterium gilvum PYR-GCK</GBSeq_source>
  <GBSeq_organism>Mycobacterium gilvum PYR-GCK</GBSeq_organism>
  <GBSeq_taxonomy>Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium</GBSeq_taxonomy>
  <GBSeq_references>
    <GBReference>
      <GBReference_reference>1</GBReference_reference>
      <GBReference_position>1..193</GBReference_position>
      <GBReference_authors>
        <GBAuthor>Copeland,A.</GBAuthor>
        <GBAuthor>Lucas,S.</GBAuthor>
        <GBAuthor>Lapidus,A.</GBAuthor>
        <GBAuthor>Barry,K.</GBAuthor>
        <GBAuthor>Detter,J.C.</GBAuthor>
        <GBAuthor>Glavina del Rio,T.</GBAuthor>
        <GBAuthor>Hammon,N.</GBAuthor>
        <GBAuthor>Israni,S.</GBAuthor>
        <GBAuthor>Dalin,E.</GBAuthor>
        <GBAuthor>Tice,H.</GBAuthor>
        <GBAuthor>Bruce,D.</GBAuthor>
        <GBAuthor>Pitluck,S.</GBAuthor>
        <GBAuthor>Richardson,P.</GBAuthor>
      </GBReference_authors>
      <GBReference_consortium>US DOE Joint Genome Institute (JGI-PGF)</GBReference_consortium>
      <GBReference_title>Sequencing of the draft genome and assembly of Mycobacterium flavescens PYR-GCK</GBReference_title>
      <GBReference_journal>Unpublished</GBReference_journal>
    </GBReference>
    <GBReference>
      <GBReference_reference>2</GBReference_reference>
      <GBReference_position>1..193</GBReference_position>
      <GBReference_authors>
        <GBAuthor>Larimer,F.</GBAuthor>
        <GBAuthor>Land,M.</GBAuthor>
      </GBReference_authors>
      <GBReference_consortium>US DOE Joint Genome Institute (JGI-ORNL)</GBReference_consortium>
      <GBReference_title>Annotation of the draft genome assembly of Mycobacterium gilvum PYR-GCK</GBReference_title>
      <GBReference_journal>Unpublished</GBReference_journal>
    </GBReference>
    <GBReference>
      <GBReference_reference>3</GBReference_reference>
      <GBReference_position>1..193</GBReference_position>
      <GBReference_authors>

t/data/gb_result.xml  view on Meta::CPAN

          <GBQualifier_name>product</GBQualifier_name>
          <GBQualifier_value>Phosphoribosyltransferase</GBQualifier_value>
        </GBQualifier>
      </GBFeature_quals>
    </GBFeature>
    <GBFeature>
      <GBFeature_key>Region</GBFeature_key>
      <GBFeature_location>11..186</GBFeature_location>
      <GBFeature_intervals>
        <GBInterval>
          <GBInterval_from>11</GBInterval_from>
          <GBInterval_to>186</GBInterval_to>
          <GBInterval_accession>EAS10332.1</GBInterval_accession>
        </GBInterval>
      </GBFeature_intervals>
      <GBFeature_quals>
        <GBQualifier>
          <GBQualifier_name>region_name</GBQualifier_name>
          <GBQualifier_value>Pribosyltran</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>note</GBQualifier_name>
          <GBQualifier_value>Phosphoribosyl transferase domain; cl00309</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>CDD:140596</GBQualifier_value>
        </GBQualifier>
      </GBFeature_quals>
    </GBFeature>
    <GBFeature>
      <GBFeature_key>CDS</GBFeature_key>
      <GBFeature_location>1..193</GBFeature_location>
      <GBFeature_intervals>
        <GBInterval>
          <GBInterval_from>1</GBInterval_from>
          <GBInterval_to>193</GBInterval_to>
          <GBInterval_accession>EAS10332.1</GBInterval_accession>
        </GBInterval>
      </GBFeature_intervals>
      <GBFeature_quals>
        <GBQualifier>
          <GBQualifier_name>locus_tag</GBQualifier_name>
          <GBQualifier_value>MflvDRAFT_2382</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>coded_by</GBQualifier_name>
          <GBQualifier_value>AAPA01000007.1:178491..179072</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>transl_table</GBQualifier_name>
          <GBQualifier_value>11</GBQualifier_value>
        </GBQualifier>
        <GBQualifier>
          <GBQualifier_name>db_xref</GBQualifier_name>
          <GBQualifier_value>InterPro:IPR000836</GBQualifier_value>
        </GBQualifier>
      </GBFeature_quals>
    </GBFeature>
  </GBSeq_feature-table>
  <GBSeq_sequence>mgapdqsgsdrelmsaadvsrtiariahqiiektaldgpdgprvillgiptrgvtlasrlatniaefsgvqvahgaldttlyrddlmtkppralaetsipaggidgalvilvddvlytgrsvrsaldalrdlgrpkavqlavlvdrghrelpiradyvgknvptsrsenvkvrltendgvdiiaiapyggppr</GBSeq_sequence>
</GBSeq>
</GBSet>

</eFetchResult>
</SOAP-ENV:Body>
</SOAP-ENV:Envelope>