BioPerl
view release on metacpan or search on metacpan
t/data/factor7.embl view on Meta::CPAN
DT 02-APR-1988 (Rel. 15, Created)
DT 02-JUL-1999 (Rel. 60, Last updated, Version 6)
XX
DE Human blood coagulation factor VII gene, complete cds.
XX
KW coagulation factor; coagulation factor VII.
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Mammalia; Eutheria;
OC Primates; Catarrhini; Hominidae; Homo.
XX
RN [1]
RP 1-12850
RX MEDLINE; 87260948.
RA O'Hara P.J., Grant F.J., Haldeman B.A., Gray C.L., Insley M.Y., Hagen F.S.,
RA Murray M.J.;
RT "Nucleotide sequence of the gene coding for human factor VII, a vitamin
RT K-dependent protein participating in blood coagulation";
RL Proc. Natl. Acad. Sci. U.S.A. 84(15):5158-5162(1987).
XX
RN [2]
RP 856-12446
RX MEDLINE; 88329723.
RA O'Hara P.J., Grant F.J.;
RT "The human factor VII gene is polymorphic due to variation in repeat copy
RT number in a minisatellite";
RL Gene 66(1):147-158(1988).
XX
DR GDB; 119897; F7.
DR SWISS-PROT; P08709; FA7_HUMAN.
XX
CC [2] minisatellite imperfect repeats only.
CC Draft entry and computer-readable copy of sequence in [1] kindly
CC provided by P.J.O'Hara, 26-JUN-1987.
XX
FH Key Location/Qualifiers
FH
FT source 1..12850
FT /db_xref="taxon:9606"
FT /organism="Homo sapiens"
FT /map="13q34"
FT prim_transcript 487..12686
FT /note="factor VII pre-mRNA (alt.)"
FT prim_transcript 487..12660
FT /note="factor VII pre-mRNA (alt.)"
FT prim_transcript 487..12664
FT /note="factor VII pre-mRNA (alt.)"
FT exon <522..585
FT /note="factor VII; G00-119-897"
FT /gene="F7"
FT gene 522..585
FT /gene="F7"
FT CDS join(522..585,1654..1719,4294..4454,6383..6407,6478..6591,
FT 8307..8447,9419..9528,10124..10247,11064..11659)
FT /codon_start=1
FT /db_xref="SWISS-PROT:P08709"
FT /note="factor VII"
FT /protein_id="AAA51983.1"
FT /translation="MVSQALRLLCLLLGLQGCLAAGGVAKASGGETRDMPWKPGPHRVF
FT VTQEEAHGVLHRRRRANAFLEELRPGSLERECKEEQCSFEEAREIFKDAERTKLFWISY
FT SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCS
FT DHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKIPILEKRNASKPQGRIVGGKVCPKG
FT ECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQ
FT SRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSL
FT VSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDS
FT CKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPRPG
FT VLLRAPFP"
FT intron 586..1653
FT /note="intron A1"
FT exon 1654..1719
FT /note="optional"
FT intron 1720..4293
FT /note="intron A"
FT exon 4294..4454
FT /number=2
FT intron 4455..6382
FT /note="intron B"
FT exon 6383..6407
FT /number=3
FT intron 6408..6477
FT /note="intron C"
FT exon 6478..6591
FT /number=4
FT intron 6592..8306
FT /note="Intron D"
FT exon 8307..8447
FT /number=5
FT intron 8448..9418
FT /note="Intron E"
FT exon 9419..9528
FT /number=6
FT intron 9529..10123
FT /note="Intron F"
FT exon 10124..10247
FT /number=7
FT intron 10248..11063
FT /note="Intron G"
FT exon 11064..>11659
FT /note="factor VII"
XX
SQ Sequence 12850 BP; 2532 A; 3888 C; 3902 G; 2528 T; 0 other;
cccggcactt ctcagtgagg ctctgtggct cacctaagaa accagcctcc cttgcaggca 60
acgcctagct ggcctggtct ggaggctctc ttcaaatatt tacatccaca cccaagatac 120
ggtcttgaga tttgactcgc atgattgcta tgggacaagt tttcatctgc agtttaaatc 180
tgtttcccaa cttacattag gggtttggaa ttctagatcg tatttgaagt gttggtgcca 240
cacacacctt aacacctgca cgctggcaac aaaaccgtcc gctctgcagc acagctgggg 300
tcacctgacc tttctcctgt cccccccact tgagctcagt ggctgggcag caggggatgc 360
atggccactg gcggccaggt gcagctctca gctggggtgt tcagaggacg cctgtgtcct 420
cccctccccc atccctctgt cacccttgga ggcagagaac tttgcccgtc agtcccatgg 480
ggaatgtcaa caggcagggg cagcactgca gagatttcat catggtctcc caggccctca 540
ggctcctctg ccttctgctt gggcttcagg gctgcctggc tgcaggtgcg tccggggagg 600
ttttctccat aaacttggtg gaagggcagt gggcaaatcc aggagccagc ccgggcttcc 660
caaaccccgc ccttgctccg gacaccccca tccaccagga gggttttctg gcggctcctg 720
ttcaatttct ttccttctag aaaccagcat ccaggcacag gaggggaggc ccttcttggt 780
agcccaggct ttggcgggat tatttttcaa agaactttag gagtgggtgg tgctttcctg 840
gcccccatgg ccctgcctgt gaggtcggac aagcgcaggg agtctggggc ctctcagagt 900
gcaggaagtg cgcacagggt gctcccaggc tggggagcac aggtagggga cggtgcgtgg 960
gggatggcgc ctggggcatg ggggatgggg tgtgggaaac ggcatgtggg gcgtagggga 1020
tggggtgtgg aggatcgggg gtggggatgg cgtgtggggt gtgggggatg ggccgtgggg 1080
gggtggggcc tgggaaacag catgtggggc atggggtgtg ggggtgaggt gtgggaaagt 1140
gtgtggggtg tgggggatgg ggcatggaaa gggcgtgtgg ggtgcagggg atggggcatg 1200
( run in 0.578 second using v1.01-cache-2.11-cpan-39bf76dae61 )