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TATA element recognition by the TATA box-binding protein has been
conserved throughout evolution.
(PMID:10617571)
* [23]Abstract This article is available in UKPMC
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by and<br/> those which it cites
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[28]Patikoglou GA,
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[30]Kim JL,
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[32]Sun L,
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[34]Yang SH,
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[36]Kodadek T,
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[38]Burley SK
Laboratories of Molecular Biophysics, Howard Hughes Medical Institute,
The Rockefeller University, New York, New York 10021 USA.
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[40]Genes & Development [1999, 13(24):3217-30]
Type: Journal Article, Research Support, Non-U.S. Gov't
DOI: 10.1101/gad.13.24.3217 The Digital Object Identifier (DOI) System
enables identification of digital entities
Abstract Highlight Terms Highlight biological terms.
[ ] Gene Ontology(2) [ ] Genes/Proteins(3) [ ] Species(1)
Cocrystal structures of wild-type [41]TATA box-binding protein
([42]TBP) recognizing 10 naturally occurring TATA elements have been
determined at 2.3-1.8 A resolution, and compared with our 1.9 A
resolution structure of [43]TBP bound to the [44]Adenovirus major late
promoter (AdMLP) TATA box (5'-TATAAAAG-3'). Minor-groove recognition by
the saddle-shaped protein induces the same conformational change in
each of these oligonucleotides, despite variations in promoter sequence
that reduce the efficiency of [45]transcription initiation. Three
molecular mechanisms explain assembly of diverse [46]TBP-TATA element
complexes. (1) T --> A and A --> T transversions leave the
minor-groove face unchanged, permitting formation of [47]TBP-DNA
complexes on many A/T-rich core promoter sequences. (2) Cavities in the
interface between [48]TBP and the minor-groove face of the AdMLP TATA
box accommodate the exocyclic NH(2) groups of G in a TACA box and in a
TATAAG box. (3) Formation of a C:G Hoogsteen basepair in a TATAAAC box
eliminates steric clashes that would be produced by the Watson-Crick
base pair. We conclude that the structure of the [49]TBP-TATA box
complex found at the heart of the polymerase II ([50]pol II)
[51]transcription machinery has remained constant over the course of
evolution, despite variations in [52]TBP and its DNA targets.
[53]Read Article at www.genesdev.org (Free after 12 months)
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