Bio-NEXUS
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#NEXUS
begin taxa;
dimensions ntax=3;
taxlabels taxon_1 taxon_2 taxon_3;
end;
['Characters' block from Maddison et al. 1997, p. 601 right column]
begin characters;
dimensions nchar=3;
charstatelabels
1 DTC_migration_pattern / 'out,_dorsal,_back' 'out,_dorsal,_back,_ventral' 'out,_dorsal,_back,_ventral,_second_turn',
3 P6.p_requirement_for_late_induction / not_required required '(not_applicable)',
2 Dependence_on_gonadal_induction_before_VPCs_divide / no_gonad_requirement dependent_on_gonad,
4 Source_of_first_induction_signal / gonad AC gonad_independent,
8 'B: P5.pap/P7.ppa division' / U L T O,
9 'C: P5.ppa/P7.pap division' / U L T,
10 'D: P5.ppp/P7.paa division' / U L T,
11 P4.p_lineage_pattern / 'S_(no_division)' 'SS_(1_division)' 'Sss_(2_divisions;_inner_daughter_divides_again)' 'SSSS_(3_divisions)' '(SSLL)_(5_divisions;_inner_granddaughters_divide_L)' 'LLLL_(7_divisions;_8_cells)',
12 P8.p_lineage_pattern / 'S_(no_division)' 'SS_(1_division)' 'ssS_(2_divisions)' 'SSSS_(3_divisions)' 'LLSS_(5_divisions)' 'LLLL_(7_divisions)',
20 P3.p_division_frequency / in_less_than_20%_of_cells more_than_20%_of_cells
5 P6.p_lineage_pattern / TTTT TUUT UTTU UUTT UTTT,
6 'P (5,7).p lineage pattern' / UUUU LUUU LLUU LLLU LLTU LULU LOTU sUUU UULL,
7 'A: P5.paa/P7.ppp division' / U L T O,
;
format
datatype=standard;
matrix
taxon_1 00000000000000000000
taxon_2 00000000000000000000
taxon_3 00000000000000000000;
end;
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