BioPerl-DB
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t/data/AP000868.gb view on Meta::CPAN
/note="MER5B: matches 22 to 176 of consensus"
repeat_region 25889..26077
/note="MIR: matches 16 to 198 of consensus"
repeat_region 26460..26737
/note="L2: matches 2564 to 2856 of consensus"
repeat_region 27188..27280
/note="L2: matches 2503 to 2596 of consensus"
repeat_region complement(27731..27883)
/note="L1MEc: matches 679 to 837 of consensus"
repeat_region complement(27909..28078)
/note="AluJo: matches 124 to 293 of consensus"
repeat_region 28615..29091
/note="L2: matches 2735 to 3265 of consensus"
repeat_region 31003..31232
/note="MIR: matches 10 to 259 of consensus"
repeat_region 32097..32219
/note="MIR3: matches 36 to 158 of consensus"
repeat_region complement(32367..32650)
/note="AluJb: matches 1 to 286 of consensus"
repeat_region 33309..33436
/note="L2: matches 3134 to 3264 of consensus"
repeat_region complement(33681..33786)
/note="L2: matches 3199 to 3308 of consensus"
repeat_region 34120..34290
/note="MER5A: matches 2 to 187 of consensus"
repeat_region complement(36857..37015)
/note="MER4A: matches 261 to 466 of consensus"
repeat_region complement(37016..37108)
/note="MER4A: matches 1 to 98 of consensus"
repeat_region complement(37111..37459)
/note="MLT2B2: matches 101 to 477 of consensus"
repeat_region complement(37465..37675)
/note="AluSg/x: matches 90 to 306 of consensus"
repeat_region complement(37676..37767)
/note="MLT2B2: matches 1 to 95 of consensus"
repeat_region complement(37908..38394)
/note="MER31A: matches 1 to 485 of consensus"
repeat_region complement(38413..38707)
/note="AluSc: matches 1 to 294 of consensus"
repeat_region complement(38905..39443)
/note="L1MC4a: matches 5297 to 5736 of consensus"
repeat_region complement(39957..40059)
/note="L2: matches 3167 to 3270 of consensus"
repeat_region complement(40271..40366)
/note="L2: matches 2957 to 3058 of consensus"
repeat_region complement(40367..40884)
/note="MER4C: matches 2 to 465 of consensus"
repeat_region complement(40885..41109)
/note="L2: matches 2784 to 2957 of consensus"
repeat_region 41110..41435
/note="AluJb: matches 1 to 309 of consensus"
repeat_region complement(41436..41656)
/note="L2: matches 2550 to 2784 of consensus"
repeat_region complement(42552..43939)
/note="L1PA15: matches 4780 to 6165 of consensus"
repeat_region complement(45781..46404)
/note="MER4B: matches 1 to 779 of consensus"
repeat_region 46607..47082
/note="LOR1a: matches 1 to 497 of consensus"
misc 1..19151
/note="Component DNA fragment"
/note="accession=AP002765.3"
/note="start=159020"
/note="end=178170"
/note="orientation=1"
variation complement(2261..2261)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:552820"
/db_xref="HGBASE:SNP000375829"
variation 6896..6896
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:475710"
/db_xref="HGBASE:SNP000368989"
variation 8597..8597
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:552467"
/db_xref="HGBASE:SNP001202646"
variation 9185..9185
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:557862"
/db_xref="HGBASE:SNP000376288"
variation 9242..9242
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:558021"
/db_xref="HGBASE:SNP000843781"
variation complement(9593..9593)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:655756"
/db_xref="HGBASE:SNP000458091"
variation 10744..10744
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:503766"
/db_xref="HGBASE:SNP000076194"
variation complement(11324..11324)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:627134"
/db_xref="HGBASE:SNP000501198"
variation complement(11580..11580)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:625888"
/db_xref="HGBASE:SNP000410419"
variation complement(12055..12055)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:623707"
variation complement(12298..12298)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:1791700"
/db_xref="HGBASE:SNP000404217"
/db_xref="TSC-CSHL:TSC0947239"
variation 15872..15872
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2276410"
prediction join(complement(15914..16090))
variation 16640..16640
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2282646"
/db_xref="HGBASE:SNP001239633"
variation 17550..17550
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2126708"
/db_xref="HGBASE:SNP001310527"
/db_xref="TSC-CSHL:TSC1134267"
misc 19152..181589
/note="Component DNA fragment"
/note="accession=AP000868.4"
/note="start=19153"
/note="end=181590"
/note="orientation=1"
variation 19560..19560
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2126709"
/db_xref="HGBASE:SNP001310528"
/db_xref="TSC-CSHL:TSC1134268"
variation complement(19688..19688)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:10904"
/db_xref="HGBASE:SNP000017373"
variation complement(22574..22574)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2282644"
/db_xref="HGBASE:SNP001241241"
variation complement(23148..23148)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:663471"
/db_xref="HGBASE:SNP000668983"
variation complement(23159..23159)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:1720331"
/db_xref="HGBASE:SNP000606798"
variation complement(23419..23419)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:671898"
/db_xref="HGBASE:SNP000519992"
variation complement(24698..24698)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2282643"
/db_xref="HGBASE:SNP001357715"
prediction join(complement(24827..25228),complement(23955..24249),
complement(23394..23554),complement(22473..22662),
complement(21816..21935),complement(20460..21331))
variation complement(25549..25549)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2282642"
/db_xref="HGBASE:SNP001241241"
variation complement(25566..25566)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:2282641"
/db_xref="HGBASE:SNP001241241"
variation complement(26578..26578)
/replace=""
/evidence="not_experimental"
/db_xref="dbSNP:1880058"
/db_xref="HGBASE:SNP000858034"
/db_xref="TSC-CSHL:TSC0891347"
variation complement(28686..28686)
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