Bio-DB-RefSeq
view release on metacpan or search on metacpan
#!/usr/bin/env perl
use utf8;
use strict;
use warnings;
use Test::More;
use Test::Needs qw(LWP::UserAgent HTTP::Request::Common Data::Stag);
use Test::RequiresInternet;
use Bio::DB::RefSeq;
my $verbose = $ENV{'BIOPERLDEBUG'} || -1;
my ($db,$seq,$seqio);
# get a single seq
$seq = $seqio = undef;
ok defined($db = Bio::DB::RefSeq->new(-verbose=>$verbose));
ok(defined($seq = $db->get_Seq_by_acc('NM_006732')));
is( $seq->length, 3775);
ok defined ($db->request_format('fasta'));
ok(defined($seq = $db->get_Seq_by_acc('NM_006732')));
is( $seq->length, 3775);
done_testing();
( run in 1.601 second using v1.01-cache-2.11-cpan-6aa56a78535 )