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</link>

<link>
file          = [% id %].link2.txt
radius        = 0.88r
bezier_radius = 0.1r
color         = dorange
thickness     = 3
ribbon        = yes
stroke_color  = dorange
stroke_thickness = 2
</link>

</links>

<highlights>

<highlight>
file = highlight.features.[% id %].txt
r0 = 0.95r
r1 = 0.98r
</highlight>

<highlight>
file = highlight.repeats.[% id %].txt
r0 = 0.93r
r1 = 0.98r
</highlight>

<highlight>
file = [% id %].linkN.txt
r0 = 0.89r
r1 = 0.92r
stroke_thickness = 2
stroke_color = grey
</highlight>

</highlights>

<ideogram>

<spacing>
    default = 0r
</spacing>

# thickness (px) of chromosome ideogram
thickness        = 20p
stroke_thickness = 2p

# ideogram border color
stroke_color     = dgrey
fill             = yes

# the default chromosome color is set here and any value
# defined in the karyotype file overrides it
fill_color       = black

# fractional radius position of chromosome ideogram within image
radius         = 0.85r
show_label     = no
label_font     = condensedbold
label_radius   = dims(ideogram,radius) + 0.05r
label_size     = 36

label_parallel   = yes

show_bands            = yes
fill_bands            = yes
band_stroke_thickness = 2
band_stroke_color     = white
band_transparency     = 1

</ideogram>

show_ticks       = yes
show_tick_labels = yes

show_grid        = no
grid_start       = dims(ideogram,radius_inner)-0.5r
grid_end         = dims(ideogram,radius_inner)

<ticks>
    skip_first_label           = yes
    skip_last_label            = no
    radius                     = dims(ideogram,radius_outer)
    tick_separation            = 2p
    min_label_distance_to_edge = 0p
    label_separation           = 5p
    label_offset               = 2p
    label_size                 = 8p
    multiplier                 = 0.001
    color                      = black
    show_label                 = no

<tick>
    spacing        = 10u
    size           = 8p
    thickness      = 2p
    color          = black
    grid           = yes
    grid_color     = grey
    grid_thickness = 1p
</tick>

<tick>
    spacing        = 100u
    size           = 8p
    thickness      = 2p
    color          = black
    grid           = yes
    grid_color     = dgrey
    grid_thickness = 1p
</tick>

</ticks>

<<include etc/colors_fonts_patterns.conf>>

<<include etc/housekeeping.conf>>