view release on metacpan or  search on metacpan

scripts/papplmaker.PLS  view on Meta::CPAN

Will be replaced by the name of the category where the analysis belongs to.

=item $SERVICE or ${SERVICE}

Will be replaced by the entire name of the service (which is usually a
concatenation of a category and a analysis name, and it is used also
as a default module name, btw).

=back

What is a difference between the C<service> and C<analysis>, and what
does C<category> mean? Sometimes these terms may be confusing because
they may mean slightly different things depending on the access method
used to communicate with them. Generally, an C<analysis> is a program
(an application, a tool) running somewhere, but sometimes on a local
machine. An example of an analysis is C<seqret> (from the EMBOSS
package). The analyses can be grouped into categories by their
functions or by type of data they deal with (but sometimes there are
no categories at all). Each analyses can be accessed using a higher
level of abstraction, a C<service>. A service is usually a
protocol-dependent wrapper, such as a Web Service, or a CORBA
service. For example there is a C<edit::seqret> service which
represents analysis C<seqret> in the category C<edit>.

=head1 FEEDBACK

=head2 Mailing Lists

User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to
the Bioperl mailing list.  Your participation is much appreciated.

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

=head2 Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track
of the bugs and their resolution. Bug reports can be submitted via the
web:

  http://redmine.open-bio.org/projects/bioperl/

=head1 AUTHOR

Martin Senger (senger@ebi.ac.uk)

=head1 COPYRIGHT

Copyright (c) 2003, Martin Senger and EMBL-EBI.
All Rights Reserved.

This script is free software; you can redistribute it and/or modify
it under the same terms as Perl itself.

=head1 DISCLAIMER

This software is provided "as is" without warranty of any kind.

=head1 BUGS AND LIMITATIONS

None known at the time of writing this.

=cut