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maintenance/big_split/file_classification.csv  view on Meta::CPAN

,"t/data/SPAN_Family8a.nex"
,"t/data/testdata.crossmatch"
,"t/data/catalase-webblast.BLASTP"
,"t/data/test.gcg"
,"t/data/rebase.withrefm"
,"t/data/unigene.data"
,"t/data/bug2473.fasta"
,"t/data/blat.psLayout3"
,"t/data/intrablock-comment.nex"
,"t/data/match.output"
,"t/data/dnaE-bsub.fa"
,"t/data/hmmscan.out"
,"t/data/testaln.mase"
,"t/data/longnames.dnd"
,"t/data/ecolitst.fa"
,"t/data/gf-s71.needle"
,"t/data/D12555.gbk"
,"t/data/msout_infile2.gz"
,"t/data/mutations.xml"
,"t/data/seqfile.pir"
,"t/data/test.maq"
,"t/data/phyloxml_examples.xml"
,"t/data/02_dogfish_rdfa_tdwg_lsid_taxrefs.xml"
,"t/data/01_basic.xml"
,"t/data/AF032047.gbk"
,"t/data/mini-align.aln"
,"t/data/sprintf.rnamotif"
,"t/data/bootstrap.tre"
,"t/data/dcr1_sp.WUBLASTP"
,"t/data/testaln.fastq"
,"t/data/prints.out"
,"t/data/consed_project/edit_dir/test_project.fasta.screen"
,"t/data/consed_project/edit_dir/test_project_to_alu.cross"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.problems"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.ace.2"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.contigs.qual"
,"t/data/consed_project/edit_dir/test_project.fasta"
,"t/data/consed_project/edit_dir/test_project.phrap.out"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.problems.qual"
,"t/data/consed_project/edit_dir/test_projectNewChromats.fof"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.qual"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.singlets"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.log"
,"t/data/consed_project/edit_dir/test_project.fasta.log"
,"t/data/consed_project/edit_dir/test_project.newtags"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.ace.1"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.contigs"
,"t/data/consed_project/edit_dir/test_project.screen.out"
,"t/data/consed_project/edit_dir/test_project.contigs"
,"t/data/consed_project/edit_dir/test_project.fasta.screen.view"
,"t/data/consed_project/phd_dir/ML4924R.phd.1"
,"t/data/consed_project/phd_dir/ML4947F.phd.1"
,"t/data/consed_project/phd_dir/ML4924F.phd.1"
,"t/data/consed_project/phd_dir/ML4922R.phd.1"
,"t/data/factor7.embl"
,"t/data/D10483.gbk"
,"t/data/omim_genemap_test"
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,"t/data/LOAD_Ccd1.dnd"
,"t/data/glimmer3-fragment.detail"
,"t/data/cysprot.msf"
,"t/data/rpsblast.bls"
,"t/data/AY095303S1.gbk"
,"t/data/spidey.test1"
,"t/data/test.xls"
,"t/data/mpath.ontology.test"
,"t/data/msout_infile2"
,"t/data/test.lasergene"
,"t/data/test.pir"
,"t/data/seg.out"
,"t/data/cysprot1b.msf"
,"t/data/multi_1.fa"
,"t/data/mapmaker.out"
,"t/data/testaln.psi"
,"t/data/a_thaliana.blastn"
,"t/data/urease.tre.nexus"
,"t/data/compLD_missingtest.prettybase"
,"t/data/bl2seq.out"
,"t/data/CG2865.fasaln"
,"t/data/Glimmer3.predict"
,"t/data/promoterwise.out"
,"t/data/signalp.short"
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,"t/data/short.blx"
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,"t/data/AAC12660.fa"
,"t/data/testaln.po"
,"t/data/genomewise.out"
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,"t/data/test.pfam"
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,"t/data/codeml43.mlc"
,"t/data/rfam_tests.stk"
,"t/data/megablast_output.paracel_btk"
,"t/data/ay007676.gb"
,"t/data/no_semicolon.newick"
,"t/data/chad100.scf"
,"t/data/sim4.rev"
,"t/data/radical-whitespace_02.nex"
,"t/data/phipsi.out"
,"t/data/crab.dat.cn"
,"t/data/cysprot.tblastn"
,"t/data/test.embl2sq"
,"t/data/humor.maf"
,"t/data/blast_no_hit_desc.txt"
,"t/data/sv40_small.xml"
,"t/data/hs_est.est2genome"
,"t/data/ATF14F8.gbk"
,"t/data/example.phase"
,"t/data/component.ontology.test"
,"t/data/hmmsearch.out"
,"t/data/P33897"
,"t/data/popgen_saureus.multidat"
,"t/data/sample_dataset.tigr"
,"t/data/test.nhx"
,"t/data/transfac_pro/reference.dat"
,"t/data/transfac_pro/matrix.dat"
,"t/data/transfac_pro/site.dat"
,"t/data/transfac_pro/gene.dat"
,"t/data/transfac_pro/fragment.dat"
,"t/data/transfac_pro/readme.txt"
,"t/data/transfac_pro/factor.dat"
,"t/data/swiss.dat"
,"t/data/psiblast.xml"
,"t/data/ctgdemo.fpc"
,"t/data/test.tab"
,"t/data/test.fasta"
,"t/data/AnnIX-v003.gbk"
,"t/data/headerless.psl"
,"t/data/alleles.fas"
,"t/data/hsinsulin.blastcl3.blastn"
,"t/data/signalp.nn.summary"
,"t/data/gmap_f9.txt"
,"t/data/rel9.swiss"
,"t/data/AE003644_Adh-genomic.gb"
,"t/data/NC_006346.gb"
,"t/data/rebase.itype2"
,"t/data/bug2862.pmr"
,"t/data/empty.bl2seq"
,"t/data/1A3I.pdb"
,"t/data/cys1_dicdi.water"
,"t/data/M0.mlc"
,"t/data/singlet_w_CT.ace"
,"t/data/ribosome-slippage.gb"
,"t/data/withrefm.906"
,"t/data/SPAN_Family7n.nex"
,"t/data/tab1part.mif"
,"t/data/lucy.stderr"
,"t/data/AB077698.gb"
,"t/data/new_blastn.txt"
,"t/data/bug1986.blastp"
,"t/data/AHCYL1.kegg"
,"t/data/02_mackerel_rdfa_tdwg_lsid_taxrefs.xml"
,"t/data/genomic-seq.epcr"
,"t/data/codeml_nan.mlc"
,"t/data/dnaE-bsub-prot.fa"
,"t/data/1ZZ19XR301R-Alignment.tblastn"
,"t/data/bug1986.blast2"
,"t/data/test.ace"
,"t/data/codeml.mlc"
,"t/data/genewise_output.paracel_btk"
,"t/data/test.embl"
,"t/data/tmhmm.out"
,"t/data/trna.strict.rnamotif"
,"t/data/dbqual/3.qual"
,"t/data/dbqual/2.qual"
,"t/data/dbqual/1.qual"
,"t/data/hs_owlmonkey.fas"
,"t/data/Glimmer2.out"
,"t/data/bl2seq.blastn"
,"t/data/mast.dat"
,"t/data/phylipdist-36.out"
,"t/data/hg16_chroms.gff"
,"t/data/signalp.negative.out"
,"t/data/insulin.water"
,"t/data/psiblastreport.out"
,"t/data/swisspfam.data"
,"t/data/AY763288.gb"
,"t/data/puzzle.tre"
,"t/data/test.meme"
,"t/data/dnaEbsub_ecoli.wublastx"
,"t/data/genomic-seq.fasta"
,"t/data/test.gcgfasta"
,"t/data/qualfile.qual"
,"t/data/qrna-relloc.out"
,"t/data/trees.nexml.xml"
,"t/data/testaln2.fasta"
,"t/data/test.game"
,"t/data/GlimmerHMM.out"
,"t/data/bug2246.blast"
,"t/data/Primate_mtDNA.nex"
,"t/data/codeml4.mlc"
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,"t/data/NC_001284.gbk"
,"t/data/dna2.fa"
,"t/data/protpars_longid.phy"
,"t/data/cds_sample.embl"
,"t/data/SPAN_Family4nl.nex"
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,"t/data/longnames.aln"
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,"t/data/gmap_f9-reverse-strand.txt"
,"t/data/test1.wublastp"
,"t/data/genemark-fragment.out"
,"t/data/Q8GBD3.swiss"
,"t/data/stress_test_pubmed.xml"
,"t/data/dnaEbsub_ecoli.wutblastx"
,"t/data/U71225.gb.unix"
,"t/data/test.raw"
,"t/data/codeml315.mlc"
,"t/data/cysprot_vs_gadfly.FASTA"
,"t/data/02_mackerel_dict_cdao_lsid_taxrefs.xml"
,"t/data/hs_owlmonkey.aln"
,"t/data/testdat.exonerate"
,"t/data/taxdump/names.dmp"
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,"t/data/test.nh"
,"t/data/seqdatabase.ini"
,"t/data/GO.defs.test"
,"t/data/test.ztr"
,"t/data/HUMBETGLOA.grail"
,"t/data/EG352462.gbxml"
,"t/data/testfile.erpin"
,"t/data/multifa.seq"
,"t/data/eutils/elink_multidb_corr.xml"
,"t/data/eutils/elink_acheck_corr.xml"
,"t/data/eutils/elink_llinks_corr.xml"
,"t/data/eutils/elink_lcheck_corr.xml"
,"t/data/eutils/elink_ncheck.xml"
,"t/data/eutils/elink_dball.xml"
,"t/data/eutils/elink_multidb.xml"
,"t/data/eutils/elink_lcheck.xml"
,"t/data/eutils/elink_llinks.xml"
,"t/data/eutils/egquery.xml"
,"t/data/eutils/einfo.xml"
,"t/data/eutils/elink_scores.xml"
,"t/data/eutils/epost.xml"
,"t/data/eutils/espell.xml"
,"t/data/eutils/einfo_dbs.xml"
,"t/data/eutils/elink_nhist_corr.xml"
,"t/data/eutils/elink_neighbor_corr.xml"
,"t/data/eutils/esearch1.xml"
,"t/data/eutils/elink_acheck.xml"
,"t/data/eutils/elink_ncheck_corr.xml"
,"t/data/eutils/esummary1.xml"
,"t/data/eutils/elink_nhist.xml"
,"t/data/eutils/esearch2.xml"
,"t/data/eutils/elink_neighbor.xml"
,"t/data/eutils/esummary2.xml"
,"t/data/echofilter.wublastn"
,"t/data/expected.blast.out"
,"t/data/lucy.qual"
,"t/data/multiseq_tags.phd"
,"t/data/multi_blast.bls"
,"t/data/1A11.pdb"
,"t/data/cysprot.fa"
,"t/data/ssp160.embl.1"
,"t/data/acefile.ace.1"
,"t/data/in.fasta"
,"t/data/multiline-intrablock-comment.nex"
,"t/data/13-pilE-F.scf"
,"t/data/signalp.hmm.short"
,"t/data/trees.nexml.old.xml"
,"t/data/bl2seq.tblastx.out"

maintenance/big_split/file_classification.csv  view on Meta::CPAN

,"t/data/HUMBETGLOA.tblastx"
,"t/data/ar.embl"
,"t/data/NM_002254.gb"
,"t/data/genemark.out"
,"t/data/ecoli_domains.rpsblast"
,"t/data/crypto.sim4-4"
,"t/data/test.ptt"
,"t/data/basic-bush.nex"
,"t/data/char-matrix-spaces.nex"
,"t/data/5X_1895.FASTXY"
,"t/data/test.cns.fastq"
,"t/data/Kingdoms_DNA.nex"
,"t/data/test.phd"
,"t/data/Fang_2003.xml"
,"t/data/adh.mb_tree.nexus"
,"t/data/bug2982.gb"
,"t/data/UnaSmithHIV-both.nex"
,"t/data/seqs.fas"
,"t/data/c200-vs-yeast.BLASTN.m8"
,"t/data/entrezgene.dat"
,"t/data/cysprot.water"
,"t/data/05_ancestral_states.xml"
,"t/data/reference_ace.ace"
,"t/data/roa1.gbxml"
,"t/data/roa1_v2.dat"
,"t/data/hs_fugu.newick"
,"t/data/atp1.matrix"
,"t/data/calm.swiss"
,"t/data/tab3part.mif"
,"t/data/popstats.prettybase"
,"t/data/multi.blast.m8"
,"t/data/crab.njb"
,"t/data/brassica_ATH.WUBLASTN"
,"t/data/PX1CG.gb"
,"t/data/no_cds_example.gb"
,"t/data/lysozyme6.simple.protml"
,"t/data/bl2seq.blastx.out"
,"t/data/signalp.nn.short"
,"t/data/bug2942.blastx"
,"t/data/nucmatrix.txt"
,"t/data/mutations.old.dat"
,"t/data/roa1.genbank"
,"t/data/NC_006511-short.gbk"
,"t/data/MmCT"
,"t/data/dmel_2Lchunk.gb"
,"t/data/polymorphism.xml"
,"t/data/geneid_1.0.out"
,"t/data/so.obo"
,"t/data/aaml_pairwise.mlc"
,"t/data/ay116458.gb"
,"t/data/blast.report"
,"t/data/multi.blast.m9"
,"t/data/blosum62.bla"
,"t/data/sequencefamily.dat"
,"t/data/noninterleaved.phy"
,"t/data/GO.defs.test2"
,"t/data/signalp.summary"
,"t/data/cysprot1a.msf"
,"t/data/02_dogfish_dict_cdao_lsid_taxrefs.xml"
,"t/data/HUMBETGLOA.gff"
,"t/data/glimmer3-fragment.predict"
,"t/data/version3.scf"
,"t/LocalDB/DBQual.t"
,"t/LocalDB/Registry.t"
,"t/LocalDB/transfac_pro.t"
,"t/LocalDB/Index/Blast.t"
,"t/LocalDB/Index/BlastTable.t"
,"t/LocalDB/Index/Index.t"
,"t/LocalDB/Flat.t"
,"t/LocalDB/BioDBGFF.t"
,"t/LocalDB/SeqFeature.t"
,"t/LocalDB/DBFasta.t"
,"t/LiveSeq/Mutation.t"
,"t/LiveSeq/LiveSeq.t"
,"t/LiveSeq/Chain.t"
,"t/LiveSeq/Mutator.t"
,"t/Root/Utilities.t"
,"t/Root/HTTPget.t"
,"t/Root/Exception.t"
,"t/Root/Tempfile.t"
,"t/Root/RootI.t"
,"t/Root/Storable.t"
,"t/Root/RootIO.t"
,"t/RemoteDB/Taxonomy.t"
,"t/RemoteDB/HIV/HIVAnnotProcessor.t"
,"t/RemoteDB/HIV/HIVQuery.t"
,"t/RemoteDB/HIV/HIV.t"
,"t/RemoteDB/HIV/HIVQueryHelper.t"
,"t/RemoteDB/EMBL.t"
,"t/RemoteDB/GenPept.t"
,"t/RemoteDB/EUtilities.t"
,"t/RemoteDB/EntrezGene.t"
,"t/RemoteDB/BioFetch.t"
,"t/RemoteDB/CUTG.t"
,"t/RemoteDB/Query/GenBank.t"
,"t/RemoteDB/SeqVersion.t"
,"t/RemoteDB/MeSH.t"
,"t/RemoteDB/SwissProt.t"
,"t/RemoteDB/SeqRead_fail.t"
,"t/RemoteDB/RefSeq.t"
,"t/RemoteDB/GenBank.t"
,"t/SeqIO/agave.t"
,"t/SeqIO/tinyseq.t"
,"t/SeqIO/abi.t"
,"t/SeqIO/ctf.t"
,"t/SeqIO/Multiple_fasta.t"
,"t/SeqIO/chaos.t"
,"t/SeqIO/fasta.t"
,"t/SeqIO/fastq.t"
,"t/SeqIO/seqxml.t"
,"t/SeqIO/strider.t"
,"t/SeqIO/table.t"
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,"t/SeqIO/ztr.t"
,"t/SeqIO/MultiFile.t"
,"t/SeqIO/flybase_chadoxml.t"
,"t/SeqIO/pln.t"
,"t/SeqIO/tigrxml.t"
,"t/SeqIO/embl.t"
,"t/SeqIO/excel.t"
,"t/SeqIO/Handler.t"