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lib/Bio/KBase/CDMI/EntityImpl.pm  view on Meta::CPAN

our $entity_field_defs = {
    'AlignmentTree' => {
	id => 1,
		    'alignment_method' => 1,
		    'alignment_parameters' => 1,
		    'alignment_properties' => 1,
		    'tree_method' => 1,
		    'tree_parameters' => 1,
		    'tree_properties' => 1,
	
    },
    'Annotation' => {
	id => 1,
		    'annotator' => 1,
		    'comment' => 1,
		    'annotation_time' => 1,
	
    },
    'AtomicRegulon' => {
	id => 1,
	
    },
    'Attribute' => {
	id => 1,
		    'description' => 1,
	
    },
    'Biomass' => {
	id => 1,
		    'mod_date' => 1,
		    'name' => 1,
	
    },
    'BiomassCompound' => {
	id => 1,
		    'coefficient' => 1,
	
    },
    'Compartment' => {
	id => 1,
		    'abbr' => 1,
		    'mod_date' => 1,
		    'name' => 1,
	
    },
    'Complex' => {
	id => 1,
		    'name' => 1,
		    'msid' => 1,
		    'mod_date' => 1,
	
    },
    'Compound' => {
	id => 1,
		    'label' => 1,
		    'abbr' => 1,
		    'msid' => 1,
		    'ubiquitous' => 1,
		    'mod_date' => 1,
		    'uncharged_formula' => 1,
		    'formula' => 1,
		    'mass' => 1,
	
    },
    'Contig' => {
	id => 1,
		    'source_id' => 1,
	
    },
    'ContigChunk' => {
	id => 1,
		    'sequence' => 1,
	
    },
    'ContigSequence' => {
	id => 1,
		    'length' => 1,
	
    },
    'CoregulatedSet' => {
	id => 1,
		    'source_id' => 1,
	
    },
    'Diagram' => {
	id => 1,
		    'name' => 1,
		    'content' => 1,
	
    },
    'EcNumber' => {
	id => 1,
		    'obsolete' => 1,
		    'replacedby' => 1,
	
    },
    'Experiment' => {
	id => 1,
		    'source' => 1,
	
    },
    'Family' => {
	id => 1,
		    'type' => 1,
		    'family_function' => 1,
	
    },
    'Feature' => {
	id => 1,
		    'feature_type' => 1,
		    'source_id' => 1,
		    'sequence_length' => 1,
		    'function' => 1,
	
    },
    'Genome' => {
	id => 1,
		    'pegs' => 1,
		    'rnas' => 1,
		    'scientific_name' => 1,
		    'complete' => 1,