AI-XGBoost
view release on metacpan or search on metacpan
lib/AI/XGBoost.pm view on Meta::CPAN
package AI::XGBoost;
use strict;
use warnings;
use AI::XGBoost::Booster;
use Exporter::Easy ( OK => ['train'] );
our $VERSION = '0.11'; # VERSION
# ABSTRACT: Perl wrapper for XGBoost library L<https://github.com/dmlc/xgboost>
sub train {
my %args = @_;
my ( $params, $data, $number_of_rounds ) = @args{qw(params data number_of_rounds)};
my $booster = AI::XGBoost::Booster->new( cache => [$data] );
if ( defined $params ) {
while ( my ( $name, $value ) = each %$params ) {
$booster->set_param( $name, $value );
}
}
for my $iteration ( 0 .. $number_of_rounds - 1 ) {
$booster->update( dtrain => $data, iteration => $iteration );
}
return $booster;
}
1;
__END__
=pod
=encoding utf-8
=head1 NAME
AI::XGBoost - Perl wrapper for XGBoost library L<https://github.com/dmlc/xgboost>
=head1 VERSION
version 0.11
=head1 SYNOPSIS
use 5.010;
use aliased 'AI::XGBoost::DMatrix';
use AI::XGBoost qw(train);
# We are going to solve a binary classification problem:
# Mushroom poisonous or not
my $train_data = DMatrix->From(file => 'agaricus.txt.train');
my $test_data = DMatrix->From(file => 'agaricus.txt.test');
# With XGBoost we can solve this problem using 'gbtree' booster
# and as loss function a logistic regression 'binary:logistic'
# (Gradient Boosting Regression Tree)
# XGBoost Tree Booster has a lot of parameters that we can tune
# (https://github.com/dmlc/xgboost/blob/master/doc/parameter.md)
my $booster = train(data => $train_data, number_of_rounds => 10, params => {
objective => 'binary:logistic',
eta => 1.0,
max_depth => 2,
silent => 1
});
# For binay classification predictions are probability confidence scores in [0, 1]
# indicating that the label is positive (1 in the first column of agaricus.txt.test)
my $predictions = $booster->predict(data => $test_data);
say join "\n", @$predictions[0 .. 10];
use aliased 'AI::XGBoost::DMatrix';
use AI::XGBoost qw(train);
use Data::Dataset::Classic::Iris;
# We are going to solve a multiple classification problem:
# determining plant species using a set of flower's measures
# XGBoost uses number for "class" so we are going to codify classes
my %class = (
setosa => 0,
versicolor => 1,
virginica => 2
);
my $iris = Data::Dataset::Classic::Iris::get();
# Split train and test, label and features
my $train_dataset = [map {$iris->{$_}} grep {$_ ne 'species'} keys %$iris];
my $test_dataset = [map {$iris->{$_}} grep {$_ ne 'species'} keys %$iris];
sub transpose {
# Transposing without using PDL, Data::Table, Data::Frame or other modules
# to keep minimal dependencies
my $array = shift;
my @aux = ();
for my $row (@$array) {
for my $column (0 .. scalar @$row - 1) {
push @{$aux[$column]}, $row->[$column];
}
}
return \@aux;
}
$train_dataset = transpose($train_dataset);
$test_dataset = transpose($test_dataset);
my $train_label = [map {$class{$_}} @{$iris->{'species'}}];
my $test_label = [map {$class{$_}} @{$iris->{'species'}}];
my $train_data = DMatrix->From(matrix => $train_dataset, label => $train_label);
my $test_data = DMatrix->From(matrix => $test_dataset, label => $test_label);
# Multiclass problems need a diferent objective function and the number
# of classes, in this case we are using 'multi:softprob' and
# num_class => 3
my $booster = train(data => $train_data, number_of_rounds => 20, params => {
max_depth => 3,
eta => 0.3,
silent => 1,
objective => 'multi:softprob',
num_class => 3
});
my $predictions = $booster->predict(data => $test_data);
=head1 DESCRIPTION
Perl wrapper for XGBoost library.
The easiest way to use the wrapper is using C<train>, but beforehand
you need the data to be used contained in a C<DMatrix> object
This is a work in progress, feedback, comments, issues, suggestion and
pull requests are welcome!!
XGBoost library is used via L<Alien::XGBoost>. That means downloading,
compiling and installing if it's not available in your system.
=head1 FUNCTIONS
=head2 train
Performs gradient boosting using the data and parameters passed
Returns a trained AI::XGBoost::Booster used
=head3 Parameters
=over 4
=item params
Parameters for the booster object.
Full list available: https://github.com/dmlc/xgboost/blob/master/doc/parameter.md
=item data
AI::XGBoost::DMatrix object used for training
=item number_of_rounds
Number of boosting iterations
=back
=head1 ROADMAP
The goal is to make a full wrapper for XGBoost.
=head2 VERSIONS
=over 4
=item 0.2
Full C API "easy" to use, with PDL support as L<AI::XGBoost::CAPI>
Easy means clients don't have to use L<FFI::Platypus> or modules dealing
with C structures
=item 0.25
Alien package for libxgboost.so/xgboost.dll
=item 0.3
Object oriented API Moose based with DMatrix and Booster classes
=item 0.4
Complete object oriented API
=item 0.5
Use perl signatures (L<https://metacpan.org/pod/distribution/perl/pod/perlexperiment.pod#Subroutine-signatures>)
=back
=head1 SEE ALSO
=over 4
=item L<AI::MXNet>
=item L<FFI::Platypus>
=item L<NativeCall>
=back
=head1 AUTHOR
Pablo RodrÃguez González <pablo.rodriguez.gonzalez@gmail.com>
=head1 COPYRIGHT AND LICENSE
( run in 1.926 second using v1.01-cache-2.11-cpan-5b529ec07f3 )