App-GeoCancerPrognosticDatasetsRetriever
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FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE6nnn/GSE6123/
Series Accession: GSE6123 ID: 200006123
334. Classification of carcinoma in situ lesions in human bladder cancer
(Submitter supplied) The presence of carcinoma in situ (CIS) lesions in the urinary bladder is associated with a high risk of disease progression to a muscle invasive stage. In this study, we used microarray expression profiling to examine the gene e...
Organism: Homo sapiens
Type: Expression profiling by array
Dataset: GDS1479 Platform: GPL96 60 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE3nnn/GSE3167/
Series Accession: GSE3167 ID: 200003167
335. Carcinoma in situ lesions of the urinary bladder
Analysis of bladder biopsies of superficial transitional cell carcinomas with or without surrounding carcinoma in situ (CIS) lesions and muscle invasive carcinomas (mTCC). CIS is a common mTCC precursor. Results provide insight into which tumors in e...
Organism: Homo sapiens
Type: Expression profiling by array, count, 6 specimen sets
Platform: GPL96 Series: GSE3167 60 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS1nnn/GDS1479/
DataSet Accession: GDS1479 ID: 1479
336. Partially degraded RNA from bladder washing is a suitable sample for studying gene expression profiles of bladder cancer
(Submitter supplied) The aims of this study were to determine the impact of different levels of RNA degradation as well as to ascertain if the gene expression profiles obtained from bladder washing correlates to that obtained from the related bladder...
Organism: Homo sapiens
Type: Expression profiling by array
Platform: GPL2767 16 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE3nnn/GSE3192/
Series Accession: GSE3192 ID: 200003192
337. Bladder cancer cells
(Submitter supplied) Examination of gene expression in several bladder cancer cell lines grown on either plastic, SIS (small intestine submucosa) gel or matrigel. A data table of normalized values is appended below. Data were normalized as described...
Organism: Homo sapiens
Type: Expression profiling by array
Platform: GPL131 36 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSEnnn/GSE796/
Series Accession: GSE796 ID: 200000796
338. Bladder tumour stage classification
(Submitter supplied) Bladder tumours used to construct a tumour stage classifier Keywords = bladder cancer, disease stages, classification Keywords: other
Organism: Homo sapiens
Type: Expression profiling by array
Dataset: GDS183 Platform: GPL80 40 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSEnnn/GSE89/
Series Accession: GSE89 ID: 200000089
339. Bladder tumour recurrence prediction
(Submitter supplied) Expression profiling of superficial bladder tumours to delineate the expression pattern differences between non-recurring and recurring tumours. Keywords = bladder cancer, superficial, recurrence, prediction Keywords: other
Organism: Homo sapiens
Type: Expression profiling by array
Platform: GPL80 31 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSEnnn/GSE88/
Series Accession: GSE88 ID: 200000088
340. Bladder tumor stage classification
Identification of clinically relevant subclasses of bladder carcinoma. Three major stages identified, Ta, T1 and T2-4. Ta tumors further classified into subgroups. A 32-gene molecular classifier was built.
Organism: Homo sapiens
Type: Expression profiling by array, count, 3 disease state, 4 tissue sets
Platform: GPL80 Series: GSE89 40 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDSnnn/GDS183/
DataSet Accession: GDS183 ID: 183
341. [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 20...
Organism: Mus musculus
601 DataSets 4393 Series 40 Related Platforms 57112 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL1nnn/GPL1261/
Platform Accession: GPL1261 ID: 100001261
342. [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 06, 20...
Organism: Homo sapiens
602 DataSets 5421 Series 61 Related Platforms 161817 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPLnnn/GPL570/
Platform Accession: GPL570 ID: 100000570
343. [HG-U133A] Affymetrix Human Genome U133A Array
(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 08, 20...
Organism: Homo sapiens
364 DataSets 1121 Series 11 Related Platforms 42179 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPLnnn/GPL96/
Platform Accession: GPL96 ID: 100000096
344. [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 18, 20...
Organism: Homo sapiens
136 DataSets 1799 Series 26 Related Platforms 37103 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL6nnn/GPL6244/
Platform Accession: GPL6244 ID: 100006244
345. Illumina HumanHT-12 V4.0 expression beadchip
(Submitter supplied) The HumanHT-12 v4 Expression BeadChip provides high throughput processing of 12 samples per BeadChip without the need for expensive, specialized automation. The BeadChip is designed to support flexible usage across a wide-spectru...
Organism: Homo sapiens
51 DataSets 2760 Series 4 Related Platforms 97140 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL10nnn/GPL10558/
Platform Accession: GPL10558 ID: 100010558
346. CRD vs 10426T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) 10426T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224602/
Sample Accession: GSM5224602 ID: 305224602
347. CRD vs 10354T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) 10354T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224601/
Sample Accession: GSM5224601 ID: 305224601
348. CRD vs 10171T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) 10171T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224600/
Sample Accession: GSM5224600 ID: 305224600
349. CRD vs J5BZ10T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) J5BZ10T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224599/
Sample Accession: GSM5224599 ID: 305224599
350. CRD vs 4415T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) 4415T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224598/
Sample Accession: GSM5224598 ID: 305224598
351. CRD vs 3770T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) 3770T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224597/
Sample Accession: GSM5224597 ID: 305224597
352. CRD vs 4363T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) 4363T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224596/
Sample Accession: GSM5224596 ID: 305224596
353. CRD vs 4385T
Organism: Homo sapiens
Source name: CRD(common reference DNA) (channel 1) 4385T (channel 2)
Platform: GPL9767 Series: GSE171369
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM5224nnn/GSM5224595/
Sample Accession: GSM5224595 ID: 305224595
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