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Series		Accession: GSE28255	ID: 200028255

278. Gene expression profiling of 19 bladder cancers from the University of Virginia
(Submitter supplied) Given the heterogeneity of disease evident from study of the presentation, histomorphology, disease course, and molecular lesions of bladder cancer, a cohort of 8 non-muscle invasive and 11 muscle invasive bladder cancers were pr...
Organism:	Homo sapiens
Type:		Expression profiling by array
Platform: GPL96 19 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE37nnn/GSE37317/
Series		Accession: GSE37317	ID: 200037317

279. Gene expression signatures in a human bladder cancer cell line SW780 transfected with miR-137 precursor molecule
(Submitter supplied) To clarify the effect of miRNAs, we carried out a gene expression microarray analysis of SW780 cells transfected with a miR-137 precursor or a negative control.  We found that 1,326 probe sets (1,016 unique genes) were downregula...
Organism:	Homo sapiens
Type:		Expression profiling by array
Platform: GPL13607 2 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE41nnn/GSE41760/
Series		Accession: GSE41760	ID: 200041760

280. Identification of target genes of cancer-related microRNAs in human cancer
(Submitter supplied) To identify target genes of cancer-related microRNAs in human cancer, several cell lines (bladder cancer, prostate cancer, renal cell carcinoma, esophageal squamous cell carcinoma, and head and neck squamous cell carcinoma) were ...
Organism:	Homo sapiens
Type:		Expression profiling by array
Platforms: GPL10332 GPL13607 35 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE37nnn/GSE37119/
Series		Accession: GSE37119	ID: 200037119

281. FGFR3-shRNA induced transcriptional changes in RT112 bladder cancer cells
(Submitter supplied) Aberrant activation of FGFR3 via overexpression or mutation is a frequent feature of bladder cancer; however, its molecular and cellular consequences and functional relevance to carcinogenesis are not well understood.  In this st...
Organism:	Homo sapiens
Type:		Expression profiling by array
Dataset: GDS4454 Platform: GPL570 24 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE41nnn/GSE41035/
Series		Accession: GSE41035	ID: 200041035

282. Fibroblast growth factor receptor 3 depletion effect on bladder cancer cell line RT112
Analysis of bladder cancer cell line RT112 subjected to doxycycline-inducible, shRNA knockdown of FGFR3. Knockdown of FGFR3 in RT112 cells significantly attenuates tumor growth in vitro and in vivo. Results provide insight into the molecular mechanis...
Organism:	Homo sapiens
Type:		Expression profiling by array, transformed count, 4 genotype/variation, 2 protocol sets
Platform: GPL570 Series: GSE41035 24 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS4nnn/GDS4454/
DataSet		Accession: GDS4454	ID: 4454

283. Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
(Submitter supplied) We assessed Smart-Seq, a new single-cell RNA-Seq library preparation method, on a variety of mouse and human RNA samples or cells.
Organism:	Mus musculus; Homo sapiens
Type:		Expression profiling by high throughput sequencing
4 related Platforms 121 Samples
FTP download: GEO (BED, TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE38nnn/GSE38495/
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA170814
Series		Accession: GSE38495	ID: 200038495

284. Expression data from bladder tumors and adjacent normal tissues
(Submitter supplied) miRNAs are involved in cancer development and progression,acting as tumor suppressors or oncogenes. Half of the human miRNAs are located in cancer-associated genomic regions and can function as tumor suppressor genes or oncogenes...
Organism:	synthetic construct; Homo sapiens
Type:		Non-coding RNA profiling by array
Platform: GPL8786 20 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE39nnn/GSE39093/
Series		Accession: GSE39093	ID: 200039093

285. Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA [Bladder samples]
(Submitter supplied) Background: As degradation of formalin-fixed paraffin-embedded (FFPE) samples limits ability to expression profile, we explored factors predicting success for FFPE profiling and investigated an approach overcoming this limitation...
Organism:	Homo sapiens
Type:		Expression profiling by array
Platform: GPL5188 141 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE39nnn/GSE39016/
Series		Accession: GSE39016	ID: 200039016

286. Integrated genomic and gene expression profiling identifies two major gene/genomic circuits operating in urothelial carcinoma
(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:	Homo sapiens
Type:		Expression profiling by array; Genome variation profiling by genome tiling array
Platforms: GPL6947 GPL4723 277 Samples
FTP download: GEO (GPR) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE32nnn/GSE32549/
Series		Accession: GSE32549	ID: 200032549

287. Integrated genomic and gene expression profiling identifies two major gene/genomic circuits operating in urothelial carcinoma (gene expression)
(Submitter supplied) Genomic and gene expression profiling identifies two major gene/genomic circuits operating in urothelial carcinoma
Organism:	Homo sapiens
Type:		Expression profiling by array
Platform: GPL6947 131 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE32nnn/GSE32548/
Series		Accession: GSE32548	ID: 200032548

288. Integrated genomic and gene expression profiling identifies two major gene/genomic circuits operating in urothelial carcinoma (genomic)
(Submitter supplied) Genomic and gene expression profiling identifies two major gene/genomic circuits operating in urothelial carcinoma
Organism:	Homo sapiens
Type:		Genome variation profiling by genome tiling array
Platform: GPL4723 146 Samples
FTP download: GEO (GPR) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE32nnn/GSE32535/
Series		Accession: GSE32535	ID: 200032535

289. Identification of a novel set of DNA methylation markers in bladder cancer using MBD-methylCap/seq and urine DNA screening in a Chinese population
(Submitter supplied) The aim of the present study was to identify novel DNA methylation markers in bladder cancer (BCa) through genome-wide profiling of bladder cancer cell lines and subsequent MSP screening in urine samples. Experimental Design: MBD...
Organism:	Homo sapiens
Type:		Methylation profiling by high throughput sequencing
Platform: GPL9052 2 Samples
FTP download: GEO (WIG) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE33nnn/GSE33839/
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA148095
Series		Accession: GSE33839	ID: 200033839

290. Discovery of genes regulated by the metastasis suppressor gene, RhoGDI2
(Submitter supplied) A number of studies find that metastasis suppressor proteins, including RhoGDI2, may function in part though controlling expression of genes regulating metastasis (reviewed in Smith and Theodorescu, Nature Reviews Cancer, 2009, P...
Organism:	Homo sapiens
Type:		Expression profiling by array
Dataset: GDS4455 Platform: GPL570 4 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE35nnn/GSE35014/
Series		Accession: GSE35014	ID: 200035014

291. RhoGTP dissociation inhibitor 2 effect on UM-UC-3 bladder cancer cells
Analysis of UM-UC-3 bladder carcinoma cells (low RhoGDI2-expressing and highly metastatic) stably transfected with GFP-RhoGDI2. RhoGDI2 is a metastasis suppressor protein. Results provide insight into the molecular basis of RhoGD12-mediated blockage ...
Organism:	Homo sapiens
Type:		Expression profiling by array, transformed count, 2 genotype/variation sets
Platform: GPL570 Series: GSE35014 4 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS4nnn/GDS4455/
DataSet		Accession: GDS4455	ID: 4455

292. Whole genome expression data from human urinary bladder cancer
(Submitter supplied) At diagnosis approximately 75% of bladder urothelial carcinomas are non muscle invasive bladder cancers (Ta, T1 and Tis), 20% are muscle invasive bladder cancer (T2-T4) and 5% are already metastatic. Non muscle invasive bladder c...
Organism:	Homo sapiens
Type:		Expression profiling by array
Platform: GPL6244 8 Samples