Algorithm-Classifier-IsolationForest
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benchmarking/bench-extended-predict-accel.pl view on Meta::CPAN
use strict;
use warnings;
use lib '../lib';
use FindBin;
use lib "$FindBin::Bin";
use BenchAccel qw(wall_cmpthese);
use Algorithm::Classifier::IsolationForest;
use constant PI => 3.14159265358979;
sub gaussian {
my ( $mu, $sigma ) = @_;
return $mu + $sigma * sqrt( -2 * log( rand() || 1e-12 ) ) * cos( 2 * PI * rand() );
}
sub make_data {
my ( $n, $nf ) = @_;
my @rows = map {
[ map { gaussian( 0, 1 ) } 1 .. $nf ]
} 1 .. $n;
for ( 1 .. int( $n * 0.05 ) ) {
my $r = 5 + rand() * 3;
push @rows, [ map { $r * ( rand() > 0.5 ? 1 : -1 ) } 1 .. $nf ];
}
return \@rows;
} ## end sub make_data
my $HAS_C = $Algorithm::Classifier::IsolationForest::HAS_C;
my $HAS_OPENMP = $Algorithm::Classifier::IsolationForest::HAS_OPENMP;
sub build_models {
my (%opts) = @_;
my $data = delete $opts{_data};
my %m;
$m{pure_perl} = Algorithm::Classifier::IsolationForest->new( %opts, use_c => 0, )->fit($data);
if ($HAS_C) {
$m{c_serial} = Algorithm::Classifier::IsolationForest->new(
%opts,
use_c => 1,
use_openmp => 0,
)->fit($data);
}
if ( $HAS_C && $HAS_OPENMP ) {
$m{c_openmp} = Algorithm::Classifier::IsolationForest->new(
%opts,
use_c => 1,
use_openmp => 1,
)->fit($data);
}
return \%m;
} ## end sub build_models
print "=" x 70, "\n";
print " extended-mode scoring/predict accel benchmarks\n";
print " Algorithm::Classifier::IsolationForest\n";
print "=" x 70, "\n";
printf "Backend availability: HAS_C=%d HAS_OPENMP=%d HAS_SIMD=%d\n",
$HAS_C, $HAS_OPENMP,
$Algorithm::Classifier::IsolationForest::HAS_SIMD;
print "(rates shown as calls/second wall-clock; higher is faster)\n";
# -----------------------------------------------------------------------
# 1. Scoring method comparison (n_trees=100, 1000 query points)
# -----------------------------------------------------------------------
print "\n--- scoring methods (n_trees=100, 1000 query points, 2 features) ---\n";
srand(42);
my $train = make_data( 1000, 2 );
my $q1k = make_data( 1000, 2 );
my $models = build_models(
n_trees => 100,
sample_size => 256,
mode => 'extended',
seed => 1,
_data => $train,
);
for my $method (
qw(score_samples predict score_predict_samples
score_predict_split path_lengths)
)
{
printf "\n %s\n", $method;
my %v;
for my $accel ( sort keys %$models ) {
my $m = $models->{$accel};
if ( $method eq 'predict'
|| $method eq 'score_predict_samples'
|| $method eq 'score_predict_split' )
{
$v{$accel} = sub { $m->$method( $q1k, 0.5 ) };
} else {
$v{$accel} = sub { $m->$method($q1k) };
}
} ## end for my $accel ( sort keys %$models )
wall_cmpthese( -2, \%v );
} ## end for my $method ( qw(score_samples predict score_predict_samples...))
# -----------------------------------------------------------------------
# 2. Query set size scaling (n_trees=100, score_samples)
# -----------------------------------------------------------------------
print "\n--- query set size (n_trees=100, score_samples, 2 features) ---\n";
srand(99);
my %q;
$q{$_} = make_data( $_, 2 ) for ( 100, 500, 1_000, 5_000, 10_000 );
for my $n ( 100, 500, 1_000, 5_000, 10_000 ) {
printf "\n %d query points\n", $n;
my %v;
for my $accel ( sort keys %$models ) {
$v{$accel} = sub { $models->{$accel}->score_samples( $q{$n} ) };
}
wall_cmpthese( -2, \%v );
}
# -----------------------------------------------------------------------
# 3. n_trees scaling (1000 query points, score_samples)
# -----------------------------------------------------------------------
print "\n--- n_trees effect (1000 query points, 2 features) ---\n";
srand(42);
my $train2 = make_data( 1000, 2 );
for my $nt ( 10, 50, 100, 200, 500 ) {
( run in 0.807 second using v1.01-cache-2.11-cpan-6aa56a78535 )