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acebrowser/htdocs/stylesheets/aceperl.css  view on Meta::CPAN

                    color: black;
                    height: 4;
                    bump: +1;
                    key: 'Worm\ Transcriptome\ Project\ genes';
                  }
.Oligos           { background-color: violet;
                    color: black;
                    connect: 1;
                    connect_color: cyan;
                    connector: violet;
                    bump: -1;
                    key: 'oligos';
                  }
.PolyA-sites      { background-color: violet;
                    color: blue;
                    bump: -1;
                    key: 'polyA sites';
                  }
.Primers          { background-color: violet;
                    color: black;
                    connect: 1;
                    connector: violet;
                    connect_color: gray;
                    bump: -1;
                    key: 'oligos';
                  }
.HMMer            { background-color: red;
                    color: black;
                    connect: 1;
	            height: 4;
                    connector: black;
	            label: 1;
                    bump: -1;
                    key: 'motifs';
                  }
.Briggsae         { background-color: tomato;
                    color: black;
                    height: 4;
                    bump: +1;
                    key: 'C.\ briggsae\ similarity';
                  }
.Prosite          { background-color: bisque;
                    color: black;
                    height: 4;
                    bump: +1;
                    key: 'prosite';
                  }
.Misc_feature     { background-color: bisque;
                    color: black;
                    height: 4;
                    bump: +1;
                    key: 'Miscellaneous';
                  }
.Clone            { color: black;
                    height: 7;
                    bump: +1;
                    key: 'YACs\ &\ Cosmids';
                  }

/* this is all das stuff */
default.default {
  glyph: GENERIC;
  das: 1;
  label: 1;
  bump: +1;
  height: 6;
  color: wheat;
}
Sequence.default {
  glyph: GENERIC;
  das: 1;
  label: 1;
  bump: +1;
  height: 6;
  color: black;
  background-color: gray;
}
ALLELE.default {
  glyph: ANCHORED_ARROW;
  das: 1;
  label: 1;
  bump: +1;
  height: 3;
  color: black;
  background-color: tomato;
}
translation.default {
  glyph: GENERIC;
  das: 1;
  height: 5;
  bump: +1;
  point: 2;
  color: blue;
}
translated.default {
  glyph: GENERIC;
  das: 1;
  height: 5;
  label: 1;
  bump: +1;
  height: 6;
  color: blue;
}
translated.stopsite {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 5;
  color: black;
}
translated.ATG {
  glyph: CROSS;
  das: 1;
  label: 1;
  height: 2;
  color: green;
}
translated.CDS {
  glyph: ARROW;
  das: 1;
  label: 1;
  height: 6;
  color: cyan;
}
Predicted_gene.default {
  glyph: TRANSCRIPT;
  das: 1;
  label: 1;
  bump: +1;
  height: 10;
  color: dodgerblue;
  background-color: dodgerblue;
}
transcription.default {
  glyph: TRANSCRIPT;
  das: 1;
  label: 1;
  bump: +1;
  height: 10;
  color: black;
  background-color: wheat;
}
transcription.transcript {
  glyph: TRANSCRIPT;
  das: 1;
  label: 1;
  bump: +1;
  height: 10;
  background-color: dodgerblue;
  color: black;
  linewidth: 1;
}
transcription.curated {
  glyph: TRANSCRIPT;
  das: 1;
  label: 1;
  height: 10;
  color: black;
  background-color: wheat;
}
transcription.exon {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 10;
  background-color: dodgerblue;
  color: dodgerblue;
  linewidth: 1;
}
transcription.intron {
  glyph: CONNECTOR;
  das: 1;
  label: 1;
  height: 10;
  color: blue;
}
transcription.tRNA {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 5;
  color: red;
  color: red;
  linewidth: 1;
}
transcription.mRNA {
  glyph: TOOMANY;
  das: 1;
  label: 1;
  height: 5;
  color: magenta;
  color: black;
  linewidth: 1;
}
transcription.snRNA {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 5;
  color: green;
  color: blue;
  linewidth: 1;
}
transcription.polyA {
  glyph: ARROW;
  das: 1;
  label: 1;
  height: 2;
  color: green;
  parallel: yes;
  northeast: no;
}
transcription.splice5 {
  glyph: ARROW;
  das: 1;
  label: 1;
  color: green;
  height: 2;
  parallel: yes;
  northeast: yes;
  southwest: no;
}
transcription.splice3 {
  glyph: ARROW;
  das: 1;
  label: 1;
  color: green;
  height: 2;
  parallel: yes;
  northeast: yes;
  southwest: no;
}
variation.default {
  glyph: GENERIC;
  das: 1;
  label: 1;
  bump: +1;
  height: 2;
  color: gray;
}
variation.insertion {
  glyph: ARROW;
  das: 1;
  label: 1;
  color: yellow;
  height: 5;
  parallel: no;
  northeast: no;
}
variation.deletion {
  glyph: ARROW;
  das: 1;
  label: 1;
  color: yellow;
  height: 5;
  parallel: no;
  southwest: no;
}
variation.substitution {
  glyph: ARROW;
  das: 1;
  label: 1;
  color: cyan;
  height: 5;
  parallel: no;
  northeast: yes;
  southwest: no;
}
structural.default {
  glyph: ANCHORED_ARROW;
  das: 1;
  bump: +1;
  label: 1;
  height: 4;
  linewidth: 1;
  color: red;
}
structural.Link {
  glyph: ANCHORED_ARROW;
  das: 1;
  bump: +1;
  height: 4;
  linewidth: 2;
  color: black;
}
structural.GenePair_STS {
  glyph: PRIMERS;
  das: 1;
  bump: +1;
  height: 4;
  linewidth: 1;
  color: violet;
  connect: 1;
  connector: violet;
}
structural.PCR_product {
  glyph: PRIMERS;
  das: 1;
  label: 1;
  height: 50;
  color: #33ff33;
}
structural.Genomic_canonical {
  glyph: ANCHORED_ARROW;
  das: 1;
  label: 1;
  bump: +1;
  height: 3;
  color: black;
}
structural.clone {
  glyph: GENERIC;
  das: 1;
  height: 5;
  color: #33ff33;
}
structural.assembly_tag {
  glyph: GENERIC;
  das: 1;
  point: 2;
  color: red;
}
structural.Clone_left_end {
  glyph: GENERIC;
  das: 1;
  point: 2;
  color: red;
}
structural.Clone_right_end {
  glyph: GENERIC;
  das: 1;
  point: 2;
  color: red;
}
structural.primer_left {
  glyph: TEXT;
  das: 1;
  label: 1;
  font: helvetica;
  fontsize: 8;
  string: l;
  color: purple;
}
structural.primer_right {
  glyph: TEXT;
  das: 1;
  label: 1;
  font: helvetica;
  fontsize: 8;
  string: r;
  color: purple;
}
structural.oligo {
  glyph: GENERIC;
  das: 1;
  bump: +1;
  height: 3;
  color: #669900;
  background-color: white;
}
structural.SNP {
  glyph: TRIANGLE;
  point: 1;
  das: 1;
  label: 1;
  height: 2;
  color: green;
}
Homol_data.default {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  label: 1;
  height: 3;
  color: black;
  background-color: red;
}
Homol_data.NN {
  glyph: TOOMANY;
  das: 1;
  label: 1;
  height: 50;
  color: #666666;
  linewidth: 1;
}
Homol_data.NP {
  glyph: SEGMENTS;
  das: 1;
  label: 1;
  height: 50;
  color: #666666;
  linewidth: 1;
}
Homol_data.PN {
  glyph: SEGMENTS;
  das: 1;
  label: 1;
  height: 2;
  color: #666666;
  linewidth: 1;
}
Homol_data.PP {
  glyph: SEGMENTS;
  das: 1;
  label: 1;
  height: 50;
  color: #666666;
  linewidth: 1;
}
similarity.default {
  glyph: SEGMENTS;
  das: 1;
  label: 1;
  bump: +1;
  height: 5;
  background-color: limegreen;
  color: black;
}
similarity.BLAT_EST_GENOME {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: greenyellow;
  fillcolor: red;
}
similarity.BLASTN {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: lawngreen;
}
similarity.BLASTN_EST_briggsae {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: thistle;
}
similarity.BLASTN_EST_elegans {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: springgreen;
}
similarity.BLASTN_TC1 {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: lime;
}
similarity.BLASTN_briggsae_cosmid {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: orchid;
}
similarity.BLASTN_eleg_brig {
  glyph: SEGMENTS;
  das: 1;

acebrowser/htdocs/stylesheets/aceperl.css  view on Meta::CPAN

  height: 5;
  background-color: darkgray;
  color: red;
}
similarity.BLASTX_wormpep {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: darkred;
}
similarity.BLASTP {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: yellow;
}
similarity.TBLASTN {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: cyan;
}
similarity.TBLASTX {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: royalblue;
}
similarity.TBLASTX_briggsae {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: violet;
}
similarity.TBLASTX_EST_elegans {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: dodgerblue;
}
similarity.TBLASTX_EST {
  glyph: SEGMENTS;
  das: 1;
  bump: +1;
  height: 5;
  background-color: darkgray;
  color: dodgerblue;
}
repeat.default {
  glyph: GENERIC;
  das: 1;
  bump: +1;
  height: 3;
  background-color: #ffe4c4;
  color: #8b7d6b;
}
repeat.microsatellite {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 50;
  color: #6699cc;
}
repeat.inverted_repeat {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 50;
  color: #6699cc;
}
repeat.tandem_repeat {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 5;
  color: #6699cc;
}
repeat.transposable_element {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 5;
  color: #6699cc;
}
repeat.LINE {
  glyph: GENERIC;
  das: 1;
  label: 1;
  height: 5;
  color: #6699cc;
}
experimental.default {
  glyph: GENERIC;
  das: 1;
  label: 1;
  bump: +1;
  height: 5;
  color: black;
  background-color: #b8860b;
}
experimental.cDNA_for_RNAi {
  glyph: SPAN;
  das: 1;
  label: 1;
  bump: +1;
  height: 4;
  color: black;
  background-color: limegreen;
}
experimental.knockout {
  glyph: TRIANGLE;
  point: 1;
  das: 1;
  label: 1;
  color: red;
}
experimental.expression_tag {
  glyph: GENERIC;
  das: 1;
  label: 1;
  color: cyan;
}
experimental.microarrayed {
  glyph: TRIANGLE;
  das: 1;
  color: yellow;
}
experimental.RNAi {
  glyph: GENERIC;
  das: 1;
  label: 1;
  bump: +1;
  height: 4;
  background-color: goldenrod;
  color: black;
}
experimental.transgenic {
  glyph: GENERIC;
  das: 1;
  label: 1;
  color: blue;
}
experimental.mutant {
  glyph: GENERIC;
  das: 1;
  label: 1;
  color: violet;
}
partial_gene.default {
  glyph: GENERIC;
  das: 1;
  label: 1;
  background-color: yellow;
  color: orange;
  height: 5;
  bump: +1;
}