Alien-SeqAlignment-edlib

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README  view on Meta::CPAN

            Q: ACGACG (0 - 5)

SEE ALSO
    *   edlib <https://github.com/Martinsos/edlib>

        Edlib is a lightweight and superfast C/C++ library for sequence
        alignment using the edit (Levenshtein) distance between two or more
        biological (usually) sequences. It can calculate the edit distance,
        find the optimal aligment path and the coordinates (start/end)
        locations. It supports multiple alignment modes such as global (NW),
        prefix (SHW) and infix (HW). The library does not handle utf8 and
        its primary use is to compute edit distances and alignments over
        small (255 characters or fewer) alphabets as they occur in
        bioinformatic applications.

    *   Text::Levenshtein::Edlib
        <https://metacpan.org/pod/Text::Levenshtein::Edlib>

        An XS library that also wraps around the edlib library and returns
        edit distances, as well as alignment paths.

lib/Alien/SeqAlignment/edlib.pm  view on Meta::CPAN


=over 4

=item * L<edlib|https://github.com/Martinsos/edlib>

Edlib is a lightweight and superfast C/C++ library for sequence 
alignment using the edit (Levenshtein) distance between two or more
biological (usually) sequences. It can calculate the edit distance, 
find the optimal aligment path and the coordinates (start/end) 
locations. It supports multiple alignment modes such as global (NW), 
prefix (SHW) and infix (HW). The library does not handle utf8 and its
primary use is to compute edit distances and alignments over small 
(255 characters or fewer) alphabets as they occur in bioinformatic
applications.


=item * L<Text::Levenshtein::Edlib|https://metacpan.org/pod/Text::Levenshtein::Edlib>

An XS library that also wraps around the edlib library and returns
edit distances, as well as alignment paths.



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