Bio-MUST-Apps-HmmCleaner
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test/GNTPAN12210.ali view on Meta::CPAN
>Gallus gallus@ENSGALP00000005317
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCSHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Taeniopygia guttata@ENSTGUP00000002617
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCGHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Anolis carolinensis@ENSACAP00000017686
LSM********RSGIHAPTPPRRVLGIMAEPEVSLQTSARTPQAAASSAATASSVTAPPA*******SSGGGSGGSSST*******SSSDPVRPGLSQQQ**RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN*****P*PTAPRMDLQQTVTNLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Protopterus annectens@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens@comp301579_c0_seq1
******************************************MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTG******SGSSDPARPGLSQQQ**RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN*****P*ATAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSDDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Latimeria chalumnae@ENSLACP00000012334
************RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPR*****AGGSSLNNGPNPGPSGGAGS*******SGGSDPARPGLSQQQ**RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PTAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKSILQMSRPVVEGSL...
>Danio rerio@ENSDARP00000011795
MAD****************************************PAAQSSAQPRLQQAQSSGPTGSNSNPGA***************GSSDPARPGLSQQQ**WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN*****P*PTAARMELQQQAASLTETCRSCGHSLA*EHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Oreochromis niloticus@ENSONIP00000001395
MSD*****************************************PAAQALQPRLLQAQSAGSASSSTTTTAGSGS***********GNSDPVRPGLSQQQ**RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PSATRIDLQQQAASLSEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Homo sapiens@ENSP00000263754
*************************MSEAGGAGPGGCGAGAGAGAGPGALPPQPAALPPAPPQGSPC**AAAAGGSGACGPATAVAAAGTAEGPGGGGSA**RIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Mus musculus@ENSMUSP00000000724
*************************MAEAGGAG********************SPALPPAPPHGSPRTLATAAGSSASCGPATAVAAAGTAEGPGGGGSA**RIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRGDLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMDRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Canis familiaris@ENSCAFP00000008685
test/GNTPAN12210.ali view on Meta::CPAN
>Meleagris gallopavo@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000018380
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Meleagris gallopavo@ENSMGAP00000011414
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Taeniopygia guttata@ENSTGUP00000003370
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRAELQQAAASLAEPCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Xenopus tropicalis@ENSXETP00000030583
*************************MVCVAGSG************************SSALPQGSPAIVASAASGAARG******AESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN*****PPPTPPKMDLQQTVVSLAEPCRSCGHTLA*AHVSH*LENVSEEEMNRLLGIVLDIEYLFTCV***HKEEDADTKQVY*FCLFKLLRKCILQMVKPAVEGSL...
>Latimeria chalumnae@ENSLACP00000007242
*************************MSE*****************************GGGVQQGSPAP***********GSAGSVPAGGADGSGSAAGSA**RIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN*****PPPTPPRVDLQQTVGSLTEPCRSCSHTLA*DHVSH*LENVLEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPAVEGSL...
>Danio rerio@ENSDARP00000085190
*************************MSE*****************************STGIPQGSPAVGAAGSAPAAPG*******VGGTECSGAAVGSA**RIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE*QPTAVSLMEPCRSCSHALG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCV***HKEEDPDTKQVY*FSLFKLLRKCILQMGRPVVE*AL...
>Oreochromis niloticus@ENSONIP00000003026
*************************MAD*****************************SAGIQQGSPAIGAAGLVPAAPG*******AGGTEGSGAARGSA**RIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN*****PPPTPPQTEQQSNAVNLQEPCRSCSHTLG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCI***HKEEDADTKQVY*FSLFKLLRKSILQMGKPMLEAQ*...
test/GNTPAN12210_hmm.ali view on Meta::CPAN
>Gallus gallus@ENSGALP00000005317
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCSHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Taeniopygia guttata@ENSTGUP00000002617
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCGHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Anolis carolinensis@ENSACAP00000017686
DPVRPGLSQQQ**RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN*****P*PTAPRMDLQQTVTNLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Protopterus annectens@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens@comp301579_c0_seq1
DPARPGLSQQQ**RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN*****P*ATAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSDDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Latimeria chalumnae@ENSLACP00000012334
GSDPARPGLSQQQ**RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PTAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKSILQMSRPVVEGSL...
>Danio rerio@ENSDARP00000011795
DPARPGLSQQQ**WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN*****P*PTAARMELQQQAASLTETCRSCGHSLA*EHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Oreochromis niloticus@ENSONIP00000001395
AGSGS***********GNSDPVRPGLSQQQ**RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PSATRIDLQQQAASLSEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Homo sapiens@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Mus musculus@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRGDLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMDRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Canis familiaris@ENSCAFP00000008685
test/GNTPAN12210_hmm.ali view on Meta::CPAN
>Meleagris gallopavo@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000018380
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Meleagris gallopavo@ENSMGAP00000011414
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Taeniopygia guttata@ENSTGUP00000003370
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRAELQQAAASLAEPCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Xenopus tropicalis@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN*****PPPTPPKMDLQQTVVSLAEPCRSCGHTLA*AHVSH*LENVSEEEMNRLLGIVLDIEYLFTCV***HKEEDADTKQVY*FCLFKLLRKCILQMVKPAVEGSL...
>Latimeria chalumnae@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN*****PPPTPPRVDLQQTVGSLTEPCRSCSHTLA*DHVSH*LENVLEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPAVEGSL...
>Danio rerio@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE*QPTAVSLMEPCRSCSHALG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCV***HKEEDPDTKQVY*FSLFKLLRKCILQMGRPVVE*AL...
>Oreochromis niloticus@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN*****PPPTPPQTEQQSNAVNLQEPCRSCSHTLG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCI***HKEEDADTKQVY*FSLFKLLRKSILQMGKPMLEAQ*...
test/GNTPAN12210_hmm.log view on Meta::CPAN
Taeniopygia guttata@ENSTGUP00000002617
698-730
Anolis carolinensis@ENSACAP00000017686
1-89
443-529
Protopterus annectens@comp246593_c0_seq1
Protopterus annectens@comp301579_c0_seq1
43-89
438-495
577-732
Latimeria chalumnae@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus@ENSONIP00000001395
1-70
Homo sapiens@ENSP00000263754
test/GNTPAN12210_hmm.log view on Meta::CPAN
Anolis carolinensis@ENSACAP00000000014
425-446
Meleagris gallopavo@ENSMGAP00000011451
Gallus gallus@ENSGALP00000018380
Meleagris gallopavo@ENSMGAP00000011414
Taeniopygia guttata@ENSTGUP00000003370
425-446
Xenopus tropicalis@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae@ENSLACP00000007242
26-107
425-446
Danio rerio@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm.score view on Meta::CPAN
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens@comp246593_c0_seq1 RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens@comp301579_c0_seq1 MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk q ra+prakkleklgvfsackanesckcngwknpnp taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae@ENSLACP00000012334 RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio@ENSDARP00000011795 MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus@ENSONIP00000001395 MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm.score view on Meta::CPAN
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata@ENSTGUP00000003370 QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis@ENSXETP00000030583 MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k q+r++prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae@ENSLACP00000007242 MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio@ENSDARP00000085190 MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++q +a+sl+epcrscshal dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus@ENSONIP00000003026 MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++q +a++l+epcrscsh+l dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_X.ali view on Meta::CPAN
>Gallus gallus@ENSGALP00000005317
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCSHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Taeniopygia guttata@ENSTGUP00000002617
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCGHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Anolis carolinensis@ENSACAP00000017686
DPVRPGLSQQQ**RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN*****P*PTAPRMDLQQTVTNLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Protopterus annectens@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens@comp301579_c0_seq1
DPARPGLSQQQ**RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN*****P*ATAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSDDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Latimeria chalumnae@ENSLACP00000012334
GSDPARPGLSQQQ**RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PTAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKSILQMSRPVVEGSL...
>Danio rerio@ENSDARP00000011795
DPARPGLSQQQ**WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN*****P*PTAARMELQQQAASLTETCRSCGHSLA*EHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Oreochromis niloticus@ENSONIP00000001395
AGSGS***********GNSDPVRPGLSQQQ**RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PSATRIDLQQQAASLSEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Homo sapiens@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Mus musculus@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRGDLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMDRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Canis familiaris@ENSCAFP00000008685
test/GNTPAN12210_hmm_X.ali view on Meta::CPAN
>Meleagris gallopavo@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000018380
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Meleagris gallopavo@ENSMGAP00000011414
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Taeniopygia guttata@ENSTGUP00000003370
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRAELQQAAASLAEPCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Xenopus tropicalis@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN*****PPPTPPKMDLQQTVVSLAEPCRSCGHTLA*AHVSH*LENVSEEEMNRLLGIVLDIEYLFTCV***HKEEDADTKQVY*FCLFKLLRKCILQMVKPAVEGSL...
>Latimeria chalumnae@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN*****PPPTPPRVDLQQTVGSLTEPCRSCSHTLA*DHVSH*LENVLEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPAVEGSL...
>Danio rerio@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE*QPTAVSLMEPCRSCSHALG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCV***HKEEDPDTKQVY*FSLFKLLRKCILQMGRPVVE*AL...
>Oreochromis niloticus@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN*****PPPTPPQTEQQSNAVNLQEPCRSCSHTLG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCI***HKEEDADTKQVY*FSLFKLLRKSILQMGKPMLEAQ*...
test/GNTPAN12210_hmm_X.log view on Meta::CPAN
Taeniopygia guttata@ENSTGUP00000002617
698-730
Anolis carolinensis@ENSACAP00000017686
1-89
443-529
Protopterus annectens@comp246593_c0_seq1
Protopterus annectens@comp301579_c0_seq1
43-89
438-495
577-732
Latimeria chalumnae@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus@ENSONIP00000001395
1-70
Homo sapiens@ENSP00000263754
test/GNTPAN12210_hmm_X.log view on Meta::CPAN
Anolis carolinensis@ENSACAP00000000014
425-446
Meleagris gallopavo@ENSMGAP00000011451
Gallus gallus@ENSGALP00000018380
Meleagris gallopavo@ENSMGAP00000011414
Taeniopygia guttata@ENSTGUP00000003370
425-446
Xenopus tropicalis@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae@ENSLACP00000007242
26-107
425-446
Danio rerio@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm_X.score view on Meta::CPAN
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens@comp246593_c0_seq1 RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens@comp301579_c0_seq1 MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk q ra+prakkleklgvfsackanesckcngwknpnp taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae@ENSLACP00000012334 RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio@ENSDARP00000011795 MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus@ENSONIP00000001395 MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_X.score view on Meta::CPAN
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata@ENSTGUP00000003370 QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis@ENSXETP00000030583 MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k q+r++prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae@ENSLACP00000007242 MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio@ENSDARP00000085190 MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++q +a+sl+epcrscshal dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus@ENSONIP00000003026 MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++q +a++l+epcrscsh+l dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_changeCost.ali view on Meta::CPAN
>Gallus gallus@ENSGALP00000005317
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCSHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Taeniopygia guttata@ENSTGUP00000002617
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCGHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Anolis carolinensis@ENSACAP00000017686
RPGLSQQQ**RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN*****P*PTAPRMDLQQTVTNLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Protopterus annectens@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens@comp301579_c0_seq1
DPARPGLSQQQ**RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN*****P*ATAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSDDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Latimeria chalumnae@ENSLACP00000012334
GSDPARPGLSQQQ**RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PTAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKSILQMSRPVVEGSL...
>Danio rerio@ENSDARP00000011795
DPARPGLSQQQ**WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN*****P*PTAARMELQQQAASLTETCRSCGHSLA*EHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Oreochromis niloticus@ENSONIP00000001395
AGSGS***********GNSDPVRPGLSQQQ**RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PSATRIDLQQQAASLSEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Homo sapiens@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Mus musculus@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRGDLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMDRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Canis familiaris@ENSCAFP00000008685
test/GNTPAN12210_hmm_changeCost.ali view on Meta::CPAN
>Meleagris gallopavo@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000018380
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Meleagris gallopavo@ENSMGAP00000011414
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Taeniopygia guttata@ENSTGUP00000003370
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRAELQQAAASLAEPCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Xenopus tropicalis@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN*****PPPTPPKMDLQQTVVSLAEPCRSCGHTLA*AHVSH*LENVSEEEMNRLLGIVLDIEYLFTCV***HKEEDADTKQVY*FCLFKLLRKCILQMVKPAVEGSL...
>Latimeria chalumnae@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN*****PPPTPPRVDLQQTVGSLTEPCRSCSHTLA*DHVSH*LENVLEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPAVEGSL...
>Danio rerio@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWK PTPPRAE*QPTAVSLMEPCRSCSHALG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCV***HKEEDPDTKQVY*FSLFKLLRKCILQMGRPVVE*AL...
>Oreochromis niloticus@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN*****PPPTPPQTEQQSNAVNLQEPCRSCSHTLG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCI***HKEEDADTKQVY*FSLFKLLRKSILQMGKPMLEAQ*...
test/GNTPAN12210_hmm_changeCost.log view on Meta::CPAN
451-531
691-730
Anolis carolinensis@ENSACAP00000017686
1-92
443-529
Protopterus annectens@comp246593_c0_seq1
Protopterus annectens@comp301579_c0_seq1
43-89
424-473
577-732
Latimeria chalumnae@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus@ENSONIP00000001395
1-70
Homo sapiens@ENSP00000263754
test/GNTPAN12210_hmm_changeCost.log view on Meta::CPAN
Meleagris gallopavo@ENSMGAP00000011451
Gallus gallus@ENSGALP00000018380
425-433
Meleagris gallopavo@ENSMGAP00000011414
425-433
Taeniopygia guttata@ENSTGUP00000003370
425-446
Xenopus tropicalis@ENSXETP00000030583
26-109
408-541
Latimeria chalumnae@ENSLACP00000007242
26-107
412-446
Danio rerio@ENSDARP00000085190
26-107
142-151
408-455
Oreochromis niloticus@ENSONIP00000003026
26-107
412-465
test/GNTPAN12210_hmm_changeCost.score view on Meta::CPAN
RPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens@comp246593_c0_seq1 RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens@comp301579_c0_seq1 MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk q ra+prakkleklgvfsackanesckcngwknpnp taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae@ENSLACP00000012334 RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio@ENSDARP00000011795 MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus@ENSONIP00000001395 MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_changeCost.score view on Meta::CPAN
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata@ENSTGUP00000003370 QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis@ENSXETP00000030583 MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k q+r++prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae@ENSLACP00000007242 MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio@ENSDARP00000085190 MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++q +a+sl+epcrscshal dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWK PTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus@ENSONIP00000003026 MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++q +a++l+epcrscsh+l dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_changeID.ali view on Meta::CPAN
>Gallus gallus@ENSGALP00000005317_hmmcleaned
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCSHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Taeniopygia guttata@ENSTGUP00000002617_hmmcleaned
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCGHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Anolis carolinensis@ENSACAP00000017686_hmmcleaned
DPVRPGLSQQQ**RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN*****P*PTAPRMDLQQTVTNLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Protopterus annectens@comp246593_c0_seq1_hmmcleaned
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens@comp301579_c0_seq1_hmmcleaned
DPARPGLSQQQ**RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN*****P*ATAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSDDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Latimeria chalumnae@ENSLACP00000012334_hmmcleaned
GSDPARPGLSQQQ**RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PTAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKSILQMSRPVVEGSL...
>Danio rerio@ENSDARP00000011795_hmmcleaned
DPARPGLSQQQ**WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN*****P*PTAARMELQQQAASLTETCRSCGHSLA*EHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Oreochromis niloticus@ENSONIP00000001395_hmmcleaned
AGSGS***********GNSDPVRPGLSQQQ**RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PSATRIDLQQQAASLSEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Homo sapiens@ENSP00000263754_hmmcleaned
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Mus musculus@ENSMUSP00000000724_hmmcleaned
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRGDLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMDRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Canis familiaris@ENSCAFP00000008685_hmmcleaned
test/GNTPAN12210_hmm_changeID.ali view on Meta::CPAN
>Meleagris gallopavo@ENSMGAP00000011451_hmmcleaned
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000018380_hmmcleaned
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Meleagris gallopavo@ENSMGAP00000011414_hmmcleaned
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Taeniopygia guttata@ENSTGUP00000003370_hmmcleaned
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRAELQQAAASLAEPCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Xenopus tropicalis@ENSXETP00000030583_hmmcleaned
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN*****PPPTPPKMDLQQTVVSLAEPCRSCGHTLA*AHVSH*LENVSEEEMNRLLGIVLDIEYLFTCV***HKEEDADTKQVY*FCLFKLLRKCILQMVKPAVEGSL...
>Latimeria chalumnae@ENSLACP00000007242_hmmcleaned
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN*****PPPTPPRVDLQQTVGSLTEPCRSCSHTLA*DHVSH*LENVLEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPAVEGSL...
>Danio rerio@ENSDARP00000085190_hmmcleaned
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE*QPTAVSLMEPCRSCSHALG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCV***HKEEDPDTKQVY*FSLFKLLRKCILQMGRPVVE*AL...
>Oreochromis niloticus@ENSONIP00000003026_hmmcleaned
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN*****PPPTPPQTEQQSNAVNLQEPCRSCSHTLG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCI***HKEEDADTKQVY*FSLFKLLRKSILQMGKPMLEAQ*...
test/GNTPAN12210_hmm_changeID.log view on Meta::CPAN
Taeniopygia guttata@ENSTGUP00000002617
698-730
Anolis carolinensis@ENSACAP00000017686
1-89
443-529
Protopterus annectens@comp246593_c0_seq1
Protopterus annectens@comp301579_c0_seq1
43-89
438-495
577-732
Latimeria chalumnae@ENSLACP00000012334
13-87
451-473
693-729
779-818
Danio rerio@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus@ENSONIP00000001395
1-70
Homo sapiens@ENSP00000263754
test/GNTPAN12210_hmm_changeID.log view on Meta::CPAN
Anolis carolinensis@ENSACAP00000000014
425-446
Meleagris gallopavo@ENSMGAP00000011451
Gallus gallus@ENSGALP00000018380
Meleagris gallopavo@ENSMGAP00000011414
Taeniopygia guttata@ENSTGUP00000003370
425-446
Xenopus tropicalis@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae@ENSLACP00000007242
26-107
425-446
Danio rerio@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm_changeID.score view on Meta::CPAN
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens@comp246593_c0_seq1 RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp+gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens@comp301579_c0_seq1 MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
g g +++dparpglsqqqrasqrk q ra+prakkleklgvfsackanesckcngwknpnp taprmdlqqpaaslsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae@ENSLACP00000012334 RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
g +g+dparpglsqqqrasqrk+qvra+prakkleklgvfsackan++ckcngwknpnpptaprmdlqqpaaslsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio@ENSDARP00000011795 MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
+++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+aasl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus@ENSONIP00000001395 MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+agsg +++dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+aaslsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
AGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_changeID.score view on Meta::CPAN
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata@ENSTGUP00000003370 QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq aasl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgrtll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis@ENSXETP00000030583 MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
g+ +++ r++ +k q+r++prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae@ENSLACP00000007242 MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
++ +++r++++kaq+ra+prakkleklgv+sacka+esckcngwk+pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio@ENSDARP00000085190 MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
gg+ +++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++n p pt+pr++q +a+sl+epcrscshal dhv+hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus@ENSONIP00000003026 MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
gg+ ++ +++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk++np pt+p+ ++q +a++l+epcrscsh+l dhv+hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
test/GNTPAN12210_hmm_perseqX.ali view on Meta::CPAN
>Gallus gallus@ENSGALP00000005317
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCSHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Taeniopygia guttata@ENSTGUP00000002617
*********************************************************************************************************************************QANDACKCNGWKNPN*****P*PTAPRMDLQQPVTNLSEPCRSCGHALA*DHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Anolis carolinensis@ENSACAP00000017686
DPVRPGLSQQQ**RASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPN*****P*PTAPRMDLQQTVTNLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Protopterus annectens@comp246593_c0_seq1
**********************************************************************************************************************************************************************************************************************************************************...
>Protopterus annectens@comp301579_c0_seq1
DPARPGLSQQQ**RASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPN*****P*ATAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSDDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSRPVVEGSL...
>Latimeria chalumnae@ENSLACP00000012334
GSDPARPGLSQQQ**RASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PTAPRMDLQQPAASLSEPCRSCGHALA*DHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKSILQMSRPVVEGSL...
>Danio rerio@ENSDARP00000011795
DPARPGLSQQQ**WSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPN*****P*PTAARMELQQQAASLTETCRSCGHSLA*EHVSH*LENVSEEEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Oreochromis niloticus@ENSONIP00000001395
DPVRPGLSQQQ**RASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPN*****P*PSATRIDLQQQAASLSEPCRSCGHALA*NHVSH*LENVSEDEINRLLGMVVDVENLFMSV***HKEEDTDTKQVY*FYLFKLLRKCILQMSQPVVEGSL...
>Homo sapiens@ENSP00000263754
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRADLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Mus musculus@ENSMUSP00000000724
KAQLRSAPRAKKLEKLGVYSACKAEESCKCNGWKNPN*****PSPTPPRGDLQQIIVSLTESCRSCSHALA*AHVSH*LENVSEEEMDRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKSILQRGKPVVEGSL...
>Canis familiaris@ENSCAFP00000008685
test/GNTPAN12210_hmm_perseqX.ali view on Meta::CPAN
>Meleagris gallopavo@ENSMGAP00000011451
**********************************************************************************************************************************************************************************************************************************************************...
>Gallus gallus@ENSGALP00000018380
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Meleagris gallopavo@ENSMGAP00000011414
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRADLQQAVVSLTEPCRSCSHTLA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVIEGSL...
>Taeniopygia guttata@ENSTGUP00000003370
*********************************************************************************************************************************QAEESCKCNGWKNPN*****PPPTPPRAELQQAAASLAEPCRSCSHALA*AHVSH*LENVSEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPVVEGSL...
>Xenopus tropicalis@ENSXETP00000030583
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPN*****PPPTPPKMDLQQTVVSLAEPCRSCGHTLA*AHVSH*LENVSEEEMNRLLGIVLDIEYLFTCV***HKEEDADTKQVY*FCLFKLLRKCILQMVKPAVEGSL...
>Latimeria chalumnae@ENSLACP00000007242
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPN*****PPPTPPRVDLQQTVGSLTEPCRSCSHTLA*DHVSH*LENVLEEEMNRLLGIVLDVEYLFTCV***HKEEDADTKQVY*FYLFKLLRKCILQMGKPAVEGSL...
>Danio rerio@ENSDARP00000085190
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAE*QPTAVSLMEPCRSCSHALG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCV***HKEEDPDTKQVY*FSLFKLLRKCILQMGRPVVE*AL...
>Oreochromis niloticus@ENSONIP00000003026
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQN*****PPPTPPQTEQQSNAVNLQEPCRSCSHTLG*DHVTH*LENVSEEEMNRLLGIVLDVEYLYTCI***HKEEDADTKQVY*FSLFKLLRKSILQMGKPMLEAQ*...
test/GNTPAN12210_hmm_perseqX.log view on Meta::CPAN
451-531
698-730
Anolis carolinensis@ENSACAP00000017686
1-89
442-529
Protopterus annectens@comp246593_c0_seq1
Protopterus annectens@comp301579_c0_seq1
43-89
424-497
577-732
Latimeria chalumnae@ENSLACP00000012334
13-87
449-478
693-729
779-818
Danio rerio@ENSDARP00000011795
1-89
424-529
Oreochromis niloticus@ENSONIP00000001395
1-89
Homo sapiens@ENSP00000263754
test/GNTPAN12210_hmm_perseqX.log view on Meta::CPAN
Anolis carolinensis@ENSACAP00000000014
425-446
Meleagris gallopavo@ENSMGAP00000011451
Gallus gallus@ENSGALP00000018380
Meleagris gallopavo@ENSMGAP00000011414
Taeniopygia guttata@ENSTGUP00000003370
425-446
Xenopus tropicalis@ENSXETP00000030583
26-109
412-446
Latimeria chalumnae@ENSLACP00000007242
26-107
412-446
Danio rerio@ENSDARP00000085190
26-107
408-455
Oreochromis niloticus@ENSONIP00000003026
26-107
412-456
test/GNTPAN12210_hmm_perseqX.score view on Meta::CPAN
DPVRPGLSQQQRASQRKAHARSFPRAKKLEKLGVFSACKANDSCKCNGWKNPNPPTAPRMDLQQTVTNLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVE...
Protopterus annectens@comp246593_c0_seq1 RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
+ilmwlvglqnvfshqlprmpkeyitrlvfdpkhktlalikdgrviggicfrmfptqgfteivfcavtsneqvkgygthlmnhlkeyhikhnil+fltyadeyaigyfkkqgfskdikvpksrylgyikdyegatlmecelnpripytelshiikkqkeiikklierkq qirk ypgl cfkegvrqipiesipgiretgwkp gkek...
RILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQTQIRKIYPGLPCFKEGVRQIPIESIPGIRETGWKPTGKEK...
Protopterus annectens@comp301579_c0_seq1 MADSGQASQPRLLQSQPSGIVPSSGSTTGSSTTSGTGSGSSDPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
++dparpglsqqqrasqrk q ra+prakkleklgvfsackanesckcngwknpnp taprmdlqqpa+slsepcrsc+haladhvshlenvs +einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqyk...
DPARPGLSQQQRASQRKLQARAFPRAKKLEKLGVFSACKANESCKCNGWKNPNPATAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSDDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSRPVVEGSLGSPPFEKPNIEQGVLNFVQYK...
Latimeria chalumnae@ENSLACP00000012334 RPLQNRSNFIEPADSKQSSLLPGSLSAVAMAEPVQQASQPRAGGSSLNNGPNPGPSGGAGSSGGSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
+g+dparpglsqqqrasq+k+qvr++prakkleklgvfsackan++ckcngwknpnppt+prmdlqqpa+slsepcrsc+haladhvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrk+ilqm++pvvegs...
GSDPARPGLSQQQRASQRKMQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPTAPRMDLQQPAASLSEPCRSCGHALADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKSILQMSRPVVEGS...
Danio rerio@ENSDARP00000011795 MADPAAQSSAQPRLQQAQSSGPTGSNSNPGAGSSDPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
g +++dparpglsqqq+ sq+kaqvr++prakkleklgvfs+ckan++ckcngwknpnppta rm+lqq+a+sl+e crsc+h la hvshlenvseeeinrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqmgkpvvegslgsppfekpnieqgvlnfvqykfshl+pkerqtm+elsk...
DPARPGLSQQQWSSQKKAQVRSFPRAKKLEKLGVFSSCKANDACKCNGWKNPNPPTAARMELQQQAASLTETCRSCGHSLAEHVSHLENVSEEEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMGKPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPKERQTMYELSK...
Oreochromis niloticus@ENSONIP00000001395 MSDPAAQALQPRLLQAQSAGSASSSTTTTAGSGSGNSDPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
+dp rpglsqqqrasq+kaqvra+prakkleklgvfsackan++ckcngwknpnpp a r dlqq+a+slsepcrsc+hala+hvshlenvse+einrllgmvvdvenlfmsvhkeedtdtkqvyfylfkllrkcilqm++pvvegslgsppfekpnieqgvlnfvqykfshl...
DPVRPGLSQQQRASQKKAQVRAFPRAKKLEKLGVFSACKANDTCKCNGWKNPNPPSATRIDLQQQAASLSEPCRSCGHALANHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMSQPVVEGSLGSPPFEKPNIEQGVLNFVQYKFSHL...
test/GNTPAN12210_hmm_perseqX.score view on Meta::CPAN
QAEESCKCNGWKNPNPPPTPPRADLQQAVVSLTEPCRSCSHTLAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVIEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Taeniopygia guttata@ENSTGUP00000003370 QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
+a+esckcngwknpnp pt+pr++lqq a+sl epcrscshala+hvshlenvseee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkpvvegsl+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmfl+++nyw+letpsq+r+rs+ndd+agykvnytrwlcyc+vpq+cdslpryettqvfgr+ll...
QAEESCKCNGWKNPNPPPTPPRAELQQAAASLAEPCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPVVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMFLNRINYWHLETPSQRRLRSPNDDIAGYKVNYTRWLCYCNVPQFCDSLPRYETTQVFGRTLL...
Xenopus tropicalis@ENSXETP00000030583 MVCVAGSGSSALPQGSPAIVASAASGAARGAESPSAAGGGGVGSAPLRIAAKKGQLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
r++ +k q+r++prakkleklgv+sacka e+ckcngwknpnp pt+p mdlqq+++sl epcrsc+h+la+hvshlenvseee+nrllg+v+d e+lf++vhkeed+dtkqvyf+lfkllrkcilqm kp vegslgsppfekp+ieqgv+nfvqykfshlp+k...
QLRSAPRAKKLEKLGVYSACKADETCKCNGWKNPNPPPTPPKMDLQQTVVSLAEPCRSCGHTLAAHVSHLENVSEEEMNRLLGIVLDIEYLFTCVHKEEDADTKQVYFCLFKLLRKCILQMVKPAVEGSLGSPPFEKPSIEQGVNNFVQYKFSHLPSK...
Latimeria chalumnae@ENSLACP00000007242 MSEGGGVQQGSPAPGSAGSVPAGGADGSGSAAGSARIAMKKAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
+++r++++kaq+ra+prakkleklgv+sacka+esckcngwk pnp pt+pr dlqq++ sl+epcrscsh+ladhvshlenv eee+nrllg+v+dve+lf++vhkeed+dtkqvyfylfkllrkcilqmgkp vegsl+sppfekp+ieqgv+nfvqykfshlppkerqt+vel+km...
KAQLRAAPRAKKLEKLGVYSACKAEESCKCNGWKSPNPPPTPPRVDLQQTVGSLTEPCRSCSHTLADHVSHLENVLEEEMNRLLGIVLDVEYLFTCVHKEEDADTKQVYFYLFKLLRKCILQMGKPAVEGSLESPPFEKPSIEQGVNNFVQYKFSHLPPKERQTIVELAKM...
Danio rerio@ENSDARP00000085190 MSESTGIPQGSPAVGAAGSAPAAPGVGGTECSGAAVGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
+++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk +np p t+pr++q +a+sl+epcrscshal dhv hlenvseee+nrllg+v+dve+l+++vhkeed dtkqvyf lfkllrkcilqmg+pvve l+sppfekp+ieqgv+nfvqykfshlp+kerqt+vel+kmf...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPPPTPPRAEQPTAVSLMEPCRSCSHALGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCVHKEEDPDTKQVYFSLFKLLRKCILQMGRPVVEALESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIVELAKMF...
Oreochromis niloticus@ENSONIP00000003026 MADSAGIQQGSPAIGAAGLVPAAPGAGGTEGSGAARGSARIAVKKAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
+++r++++kaq+r+ pr+kkleklgv+s+cka+ +ckcngwk +np pt+p + q a++l epcrscsh+l dhv hlenvseee+nrllg+v+dve+l+++ hkeed+dtkqvyf lfkllrk+ilqmgkp+ e +sppfekp+ieqgv+nfvqykfshlp+kerqt++...
KAQLRSSPRPKKLEKLGVYSSCKAEGACKCNGWKSQNPPPTPPQTEQQSNAVNLQEPCRSCSHTLGDHVTHLENVSEEEMNRLLGIVLDVEYLYTCIHKEEDADTKQVYFSLFKLLRKSILQMGKPMLEAQESPPFEKPSIEQGVNNFVQYKFSHLPSKERQTIM...
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