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script/lapidary  view on Meta::CPAN

	'version'		=> \$version);

#Print out help message
if(defined($help)){
    die "\n\nLapidary: a software for identifying amino acid sequences using sequenced reads\n\n
    Options:\n
    read_1\tLocation of first read file (required)\n
    read_2\tLocation of second read file if read files are paired\n
    db\tFull location to fasta file containing amino acid sequences (required)\n
    threads\tNumber of threads to use for Diamond (default: 1)\n
    identity\tDiamond identity percentage cut-off to use (default: 70)\n
    coverage\tDiamond coverage percentage cut-off to use (default: 50)\n
    read_type\tTypes of reads used (required): single or paired\n
    sequence_identification\tMethod for calling most likely sequence: identity (default) or consensus\n
    help\tDisplay help screen\n
    version\tReturn version of Lapidary\n\n";
} 

#Print out version
if(defined($version)){
    die "\n\nLapidary version 0.5.0\n\n";
}