Bio-MUST-Apps-OmpaPa

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META.yml  view on Meta::CPAN

  Path::Class: '0'
  Scalar::Util: '0'
  Smart::Comments: '0'
  Sort::Naturally: '0'
  Template: '0'
  Test::Most: '0'
  Text::Table: '0'
  aliased: '0'
  autodie: '0'
  feature: '0'
  namespace::autoclean: '0'
  perl: v5.10.0
  strict: '0'
  version: '0'
  warnings: '0'
version: '0.251770'
x_generated_by_perl: v5.26.3
x_serialization_backend: 'YAML::Tiny version 1.76'
x_spdx_expression: 'Artistic-1.0-Perl OR GPL-1.0-or-later'

Makefile.PL  view on Meta::CPAN

    "Path::Class" => 0,
    "Scalar::Util" => 0,
    "Smart::Comments" => 0,
    "Sort::Naturally" => 0,
    "Template" => 0,
    "Test::Most" => 0,
    "Text::Table" => 0,
    "aliased" => 0,
    "autodie" => 0,
    "feature" => 0,
    "namespace::autoclean" => 0,
    "strict" => 0,
    "version" => 0,
    "warnings" => 0
  },
  "TEST_REQUIRES" => {
    "Test::Files" => 0,
    "Test::Most" => 0,
    "Test::Output" => 0
  },
  "VERSION" => "0.251770",

Makefile.PL  view on Meta::CPAN

  "Smart::Comments" => 0,
  "Sort::Naturally" => 0,
  "Template" => 0,
  "Test::Files" => 0,
  "Test::Most" => 0,
  "Test::Output" => 0,
  "Text::Table" => 0,
  "aliased" => 0,
  "autodie" => 0,
  "feature" => 0,
  "namespace::autoclean" => 0,
  "strict" => 0,
  "version" => 0,
  "warnings" => 0
);


unless ( eval { ExtUtils::MakeMaker->VERSION(6.63_03) } ) {
  delete $WriteMakefileArgs{TEST_REQUIRES};
  delete $WriteMakefileArgs{BUILD_REQUIRES};
  $WriteMakefileArgs{PREREQ_PM} = \%FallbackPrereqs;

lib/Bio/MUST/Apps/OmpaPa/Blast.pm  view on Meta::CPAN

package Bio::MUST::Apps::OmpaPa::Blast;
# ABSTRACT: internal class for XML BLAST parser
# CONTRIBUTOR: Amandine BERTRAND <amandine.bertrand@doct.uliege.be>
$Bio::MUST::Apps::OmpaPa::Blast::VERSION = '0.251770';
use Moose;
use namespace::autoclean;

use autodie;
use feature qw(say);

use Smart::Comments;

extends 'Bio::FastParsers::Blast::Xml';
with 'Bio::MUST::Apps::OmpaPa::Roles::Parsable';

lib/Bio/MUST/Apps/OmpaPa/Hmmer.pm  view on Meta::CPAN

package Bio::MUST::Apps::OmpaPa::Hmmer;
# ABSTRACT: internal class for tabular HMMER parser
# CONTRIBUTOR: Amandine BERTRAND <amandine.bertrand@doct.uliege.be>
$Bio::MUST::Apps::OmpaPa::Hmmer::VERSION = '0.251770';
use Moose;
use namespace::autoclean;

use autodie;
use feature qw(say);

use Smart::Comments '###';

use List::AllUtils qw(mesh);

extends 'Bio::FastParsers::Hmmer::DomTable';
with 'Bio::MUST::Apps::OmpaPa::Roles::Parsable';