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t/data/LL-sample.seq  view on Meta::CPAN

>>26
LOCUSID: 26
LOCUS_CONFIRMED: yes
LOCUS_TYPE: gene with protein product, function known or inferred
ORGANISM: Homo sapiens
STATUS: REVIEWED
NM: NM_001091|4501850|na
NP: NP_001082|4501851
CDD: Copper amine oxidase|pfam01179|1775|na|6.883370e+02
PRODUCT: amiloride binding protein 1 precursor
ASSEMBLY: X78212
CONTIG: NT_007914.10|22047859|na|11083771|11092582|+|7|reference
EVID: supported by alignment with mRNA
XM: XM_032220|14745402|na
XP: XP_032220|14745403|na
ACCNUM: X78212|463242|na|na|na
TYPE: g
PROT: CAA55046|463243
ACCNUM: BC014093|15559450|na|na|na
TYPE: m

t/data/LL-sample.seq  view on Meta::CPAN

ACCNUM: U11862|533535|na|na|na
TYPE: m
PROT: AAC50270|533536
ACCNUM: U11863|533537|na|na|na
TYPE: m
PROT: AAB60381|533538
OFFICIAL_SYMBOL: ABP1
OFFICIAL_GENE_NAME: amiloride binding protein 1 (amine oxidase (copper-containing))
ALIAS_SYMBOL: DAO
ALIAS_SYMBOL: AOC1
PREFERRED_PRODUCT: amiloride binding protein 1 precursor
SUMMARY: Summary: This gene encodes a membrane glycoprotein that binds amiloride, a diuretic that acts by closing epithelial sodium ion channels. Experimental evidence indicates, however, that the formation of an amiloride sensitive, sodium channel r...
CHR: 7
STS: RH71199|7|8014|na|seq_map|epcr
STS: ABP1|7|32801|ABP1|seq_map|epcr
COMP: 10090|Abp1|6|6  cM|76507|7|ABP1|ncbi_mgd
COMP: 10090|1600012D06Rik|6|6  cM|76507|7|ABP1|ucsc_mgd
ALIAS_PROT: diamine oxidase
ALIAS_PROT: Amiloride-binding protein-1
UNIGENE: Hs.75741
BUTTON: unigene.gif

t/data/sofa.ontology  view on Meta::CPAN

 %sofa ; GO:0000001
  %feature ; SO:20000000
   %chromosome ; GO:0000005
    <centromere ; GO:0000004
    <telomere ; GO:0000003
   %gene ; SO:0000704
    <regulatory_region ; SO:0005836
     %enhancer ; SO:0000165
     %TF_binding_site ; SO:0000235 ; synonym:transcription_factor_binding_site % nucleotide_motif ; SO:0000714
    <transcript ; SO:0000673
     %primary_transcript ; SO:0000185 ; synonym:precursor_RNA
      <exon ; SO:0000147
      <intron ; SO:0000188
      %noncoding_primary_transcript ; SO:0000483
       %micro_RNA_primary_transcript ; SO:0000647
       %transfer_RNA_primary_transcript ; SO:0000210
      <splice_site ; SO:0000162
       %splice_acceptor ; SO:0000164 ; synonym:acceptor_splice_site
        %transsplice_acceptor_site ; SO:0000706
       %splice_donor ; SO:0000163 ; synonym:donor_splice_site
      <transcription_start_site ; SO:0000315