ABI

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ABI.pm  view on Meta::CPAN

=head1 AUTHOR

Malay <malay@bioinformatics.org>

=head1 BUGS

Please report any bugs or feature requests to
C<bug-abi at rt.cpan.org>, or through the web interface at
L<http://rt.cpan.org/NoAuth/ReportBug.html?Queue=ABI>.
I will be notified, and then you'll automatically be notified of progress on
your bug as I make changes.

or 

You can directly contact me to my email address.


=head1 SUPPORT

You can find documentation for this module with the perldoc command.

LICENSE  view on Meta::CPAN

1. You may make and give away verbatim copies of the source form of the
Standard Version of this Package without restriction, provided that you
duplicate all of the original copyright notices and associated disclaimers.

2. You may apply bug fixes, portability fixes and other modifications
derived from the Public Domain or from the Copyright Holder.  A Package
modified in such a way shall still be considered the Standard Version.

3. You may otherwise modify your copy of this Package in any way, provided
that you insert a prominent notice in each changed file stating how and
when you changed that file, and provided that you do at least ONE of the
following:

    a) place your modifications in the Public Domain or otherwise make them
    Freely Available, such as by posting said modifications to Usenet or
    an equivalent medium, or placing the modifications on a major archive
    site such as uunet.uu.net, or by allowing the Copyright Holder to include
    your modifications in the Standard Version of the Package.

    b) use the modified Package only within your corporation or organization.

LICENSE  view on Meta::CPAN

neither be construed as a distribution of this Package nor shall it
fall under the restrictions of Paragraphs 3 and 4, provided that you do
not represent such an executable image as a Standard Version of this
Package.

7. C subroutines (or comparably compiled subroutines in other
languages) supplied by you and linked into this Package in order to
emulate subroutines and variables of the language defined by this
Package shall not be considered part of this Package, but are the
equivalent of input as in Paragraph 6, provided these subroutines do
not change the language in any way that would cause it to fail the
regression tests for the language.

8. Aggregation of this Package with a commercial distribution is always
permitted provided that the use of this Package is embedded; that is,
when no overt attempt is made to make this Package's interfaces visible
to the end user of the commercial distribution.  Such use shall not be
construed as a distribution of this Package.

9. The name of the Copyright Holder may not be used to endorse or promote
products derived from this software without specific prior written permission.

t/test.t  view on Meta::CPAN

# Before `make install' is performed this script should be runnable with
# `make test'. After `make install' it should work as `perl test.pl'
#########################
# change 'tests => 1' to 'tests => last_test_to_print'
#use FindBin;
#use lib "$FindBin::Bin/..";
use Test::More qw(no_plan);

#BEGIN { plan tests => 1 };
require_ok("ABI");
my $abi = ABI->new("t/TEST_modified.ab1");
isa_ok( $abi, "ABI" );
my @base_calls = $abi->get_base_calls;