Bio-Gonzales

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Build.PL  view on Meta::CPAN

    "Moo" => 0,
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    "Set::IntervalTree" => 0,
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    "URI" => 0,
    "YAML::XS" => 0,
    "constant" => 0,
    "perl" => "5.010"
  },
  "script_files" => [
    "bin/aln2aln.pl",
    "bin/facompare",
    "bin/faextract_by_treeleaves",
    "bin/fapair-identity",

META.yml  view on Meta::CPAN

  Moo: 0
  Mouse: 0
  MouseX::Foreign: 0
  Number::Format: 0
  Params::Util: 0
  Path::Class: 0
  Scalar::Util::Numeric: 0
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  Storable: 0
  String::ShellQuote: 0
  Try::Tiny: 0
  URI: 0
  YAML::XS: 0
  constant: 0
  perl: 5.010
version: 0.0546

_build/build_params  view on Meta::CPAN

         'meta_add' => {},
         'requires' => {
                         'DateTime' => 0,
                         'Capture::Tiny' => 0,
                         'Storable' => 0,
                         'JSON::XS' => 0,
                         'YAML::XS' => 0,
                         'Config::General' => 0,
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                         'Try::Tiny' => 0,
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                         'File::Temp' => 0,
                         'Path::Class' => 0,
                         'Data::Visitor::Callback' => 0,
                         'IO::Scalar' => 0,
                         'Scalar::Util::Numeric' => 0,

_build/prereqs  view on Meta::CPAN

       'conflicts' => {},
       'requires' => {
                       'DateTime' => 0,
                       'Capture::Tiny' => 0,
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                       'Data::Dumper' => 0,
                       'Set::IntervalTree' => 0,
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                       'Math::Combinatorics' => 0,
                       'File::Temp' => 0,
                       'Path::Class' => 0,
                       'Data::Visitor::Callback' => 0,
                       'IO::Scalar' => 0,
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bin/gonz_obo2dict.pl  view on Meta::CPAN

use 5.010;

use Bio::Gonzales::Util::Cerial;
use List::MoreUtils qw/uniq/;
use Bio::Gonzales::GO::Util qw/get_recursive_related_terms_by_types/;
use Data::Stag;

use GO::Parser;
use GO::Model::Graph;
use Try::Tiny;

use Getopt::Long::Descriptive;

my ( $opt, $usage ) = describe_options(
  '%c %o <obo file>',
  [
    "format" => hidden => {
      one_of => [ [ "json|j" => "output in json format" ], [ "yaml|y" => "output in yaml format" ], ],
      default => 'json'
    }

dist.ini  view on Meta::CPAN

Moo = 0
Mouse = 0
MouseX::Foreign = 0
Number::Format = 0
Params::Util = 0
Path::Class = 0
Scalar::Util::Numeric = 0
Set::IntervalTree = 0
Storable = 0
String::ShellQuote = 0
Try::Tiny = 0
URI = 0
YAML::XS = 0
constant = 0
perl = 5.010

[Prereqs / Recommends]
Excel::Writer::XLSX = 0
Bio::Root::Version = 0
Term::ReadKey = 0
Net::DNS = 0