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t/data/real_data_1.gff  view on Meta::CPAN

ERS111111|SC|contig000020	Prodigal:2.60	CDS	50808	51362	.	+	0	ID=11111_1#11_04105;gene=ycdY;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_002146908.1,similar to AA sequence:UniProtKB:P75915,protein motif:CLUSTERS:PRK11...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	51451	51945	.	+	0	ID=11111_1#11_04106;gene=ycdZ;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:UniProtKB:P75916,protein motif:Pfam:PF06496.5;locus_tag=11111_1#11_04106;product=Inner mem...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	51983	52816	.	-	0	ID=11111_1#11_04107;gene=csgG;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729860.1,protein motif:CLUSTERS:PRK15184,protein motif:Pfam:PF03783.8;locus_t...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	52843	53259	.	-	0	ID=11111_1#11_04108;gene=csgF;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729861.1,protein motif:CLUSTERS:PRK10050,protein motif:Pfam:PF10614.3;locus_t...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	53286	53681	.	-	0	ID=11111_1#11_04109;gene=csgE;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729862.1,protein motif:CLUSTERS:PRK10386,protein motif:Pfam:PF10627.3;locus_t...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	53710	54336	.	-	0	ID=11111_1#11_04110;gene=csgD;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729863.1,similar to AA sequence:UniProtKB:P52106,protein motif:CLUSTERS:PRK10...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	55092	55547	.	+	0	ID=11111_1#11_04111;gene=csgB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729864.1,similar to AA sequence:UniProtKB:P0A1E9,protein motif:CLUSTERS:PRK10...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	55589	56044	.	+	0	ID=11111_1#11_04112;gene=csgA;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729865.1,similar to AA sequence:UniProtKB:P0A1E7,protein motif:CLUSTERS:PRK10...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	56106	56432	.	+	0	ID=11111_1#11_04113;gene=csgC;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_007470940.1,similar to AA sequence:UniProtKB:P0A1Z9,protein motif:CLUSTERS:PRK10...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	56564	56884	.	+	0	ID=11111_1#11_04114;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087410.1;locus_tag=11111_1#11_04114;product=Fimbrial protein;protein_id=gnl|SC|11111_1#...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	56972	57511	.	+	0	ID=11111_1#11_04115;eC_number=3.5.1.-;gene=ymdB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087411.1,similar to AA sequence:UniProtKB:P0A8D6,protein mo...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	57450	58934	.	+	0	ID=11111_1#11_04116;eC_number=2.7.8.-;gene=ybhO_2;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_001570877.2,similar to AA sequence:UniProtKB:P0AA84,protein ...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	58951	60105	.	-	0	ID=11111_1#11_04117;eC_number=2.1.-.-;gene=mdoC;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_001570876.1,similar to AA sequence:UniProtKB:P75920,protein mo...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	60359	61912	.	+	0	ID=11111_1#11_04118;gene=mdoG;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_001570875.1,similar to AA sequence:UniProtKB:P33136,protein motif:CLUSTERS:PRK13...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	61905	64448	.	+	0	ID=11111_1#11_04119;eC_number=2.4.1.-;gene=mdoH;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_216085.1,similar to AA sequence:UniProtKB:P62517,protein motif...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	64522	64749	.	+	0	ID=11111_1#11_04120;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729872.1,protein motif:CLUSTERS:PRK10175,protein motif:Cdd:COG5645,protein motif:Pfam:P...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	64750	65124	.	-	0	ID=11111_1#11_04121;gene=msyB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729873.1,protein motif:CLUSTERS:PRK11467;locus_tag=11111_1#11_04121;product=a...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	65206	66420	.	-	0	ID=11111_1#11_04122;gene=yceE;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729874.1,similar to AA sequence:UniProtKB:O31762,protein motif:CLUSTERS:PRK09...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	66575	67495	.	-	0	ID=11111_1#11_04123;eC_number=2.3.1.-;gene=htrB_2;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729875.1,similar to AA sequence:UniProtKB:P0ACV0,protein ...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	67715	68767	.	+	0	ID=11111_1#11_04124;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087420.1,protein motif:CLUSTERS:PRK00142,protein motif:Cdd:COG2210,protein motif:Pfam:P...
ERS111111|SC|contig000020	Prodigal:2.60	CDS	68819	69394	.	-	0	ID=11111_1#11_04125;gene=yceI_2;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087865.1,similar to AA sequence:UniProtKB:P0A8X2,protein motif:CLUSTERS:PRK...

t/data/real_data_2.gff  view on Meta::CPAN

ERS222222|SC|contig000020	Prodigal:2.60	CDS	50808	51362	.	+	0	ID=22222_2#22_04105;gene=ycdY;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_002146908.1,similar to AA sequence:UniProtKB:P75915,protein motif:CLUSTERS:PRK11...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	51451	51945	.	+	0	ID=22222_2#22_04106;gene=ycdZ;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:UniProtKB:P75916,protein motif:Pfam:PF06496.5;locus_tag=22222_2#22_04106;product=Inner mem...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	51983	52816	.	-	0	ID=22222_2#22_04107;gene=csgG;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729860.1,protein motif:CLUSTERS:PRK15184,protein motif:Pfam:PF03783.8;locus_t...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	52843	53259	.	-	0	ID=22222_2#22_04108;gene=csgF;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729861.1,protein motif:CLUSTERS:PRK10050,protein motif:Pfam:PF10614.3;locus_t...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	53286	53681	.	-	0	ID=22222_2#22_04109;gene=csgE;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729862.1,protein motif:CLUSTERS:PRK10386,protein motif:Pfam:PF10627.3;locus_t...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	53710	54336	.	-	0	ID=22222_2#22_04110;gene=csgD;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729863.1,similar to AA sequence:UniProtKB:P52106,protein motif:CLUSTERS:PRK10...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	55092	55547	.	+	0	ID=22222_2#22_04111;gene=csgB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729864.1,similar to AA sequence:UniProtKB:P0A1E9,protein motif:CLUSTERS:PRK10...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	55589	56044	.	+	0	ID=22222_2#22_04112;gene=csgA;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729865.1,similar to AA sequence:UniProtKB:P0A1E7,protein motif:CLUSTERS:PRK10...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	56106	56432	.	+	0	ID=22222_2#22_04113;gene=csgC;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_007470940.1,similar to AA sequence:UniProtKB:P0A1Z9,protein motif:CLUSTERS:PRK10...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	56564	56884	.	+	0	ID=22222_2#22_04114;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087410.1;locus_tag=22222_2#22_04114;product=Fimbrial protein;protein_id=gnl|SC|22222_2#...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	56972	57511	.	+	0	ID=22222_2#22_04115;eC_number=3.5.1.-;gene=ymdB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087411.1,similar to AA sequence:UniProtKB:P0A8D6,protein mo...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	57450	58934	.	+	0	ID=22222_2#22_04116;eC_number=2.7.8.-;gene=ybhO_2;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_001570877.2,similar to AA sequence:UniProtKB:P0AA84,protein ...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	58951	60105	.	-	0	ID=22222_2#22_04117;eC_number=2.1.-.-;gene=mdoC;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_001570876.1,similar to AA sequence:UniProtKB:P75920,protein mo...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	60359	61912	.	+	0	ID=22222_2#22_04118;gene=mdoG;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_001570875.1,similar to AA sequence:UniProtKB:P33136,protein motif:CLUSTERS:PRK13...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	61905	64448	.	+	0	ID=22222_2#22_04119;eC_number=2.4.1.-;gene=mdoH;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_216085.1,similar to AA sequence:UniProtKB:P62517,protein motif...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	64522	64749	.	+	0	ID=22222_2#22_04120;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729872.1,protein motif:CLUSTERS:PRK10175,protein motif:Cdd:COG5645,protein motif:Pfam:P...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	64750	65124	.	-	0	ID=22222_2#22_04121;gene=msyB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729873.1,protein motif:CLUSTERS:PRK11467;locus_tag=22222_2#22_04121;product=a...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	65206	66420	.	-	0	ID=22222_2#22_04122;gene=yceE;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729874.1,similar to AA sequence:UniProtKB:O31762,protein motif:CLUSTERS:PRK09...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	66575	67495	.	-	0	ID=22222_2#22_04123;eC_number=2.3.1.-;gene=htrB_2;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_004729875.1,similar to AA sequence:UniProtKB:P0ACV0,protein ...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	67715	68767	.	+	0	ID=22222_2#22_04124;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087420.1,protein motif:CLUSTERS:PRK00142,protein motif:Cdd:COG2210,protein motif:Pfam:P...
ERS222222|SC|contig000020	Prodigal:2.60	CDS	68819	69394	.	-	0	ID=22222_2#22_04125;gene=yceI_2;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_006087865.1,similar to AA sequence:UniProtKB:P0A8X2,protein motif:CLUSTERS:PRK...