Bio-Das-ProServer

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coordinates/registry_coordinates.xml  view on Meta::CPAN

  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS62" taxid="9785" source="Chromosome" authority="BROADE" test_range="" version="1">BROADE_1,Chromosome,Loxodonta africana</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS190" taxid="30608" source="Scaffold" authority="micMur" test_range="" version="1">micMur_1,Scaffold,Microcebus murinus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS171" taxid="9258" source="Ultracontig" authority="OANA" test_range="" version="5">OANA_5,Ultracontig,Ornithorhynchus anatinus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS446" taxid="5855" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Plasmodium vivax</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS470" taxid="9986" source="Scaffold" authority="oryCun" test_range="" version="2">oryCun_2,Scaffold,Oryctolagus cuniculus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS342" taxid="9615" source="Chromosome" authority="VEGA" test_range="">VEGA,Chromosome,Canis familiaris</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS123" taxid="9600" source="Chromosome" authority="PPYG" test_range="" version="2">PPYG_2,Chromosome,Pongo pygmaeus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS59" taxid="9371" source="Chromosome" authority="TENREC" test_range="">TENREC,Chromosome,Echinops telfairi</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS118" taxid="6239" source="Chromosome" authority="WS" test_range="">WS,Chromosome,Caenorhabditis elegans</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS169" taxid="8090" source="Ultracontig" authority="MEDAKA" test_range="" version="1">MEDAKA_1,Ultracontig,Oryzias latipes</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS316" taxid="9315" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Macropus eugenii</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS379" taxid="7176" source="Supercontig" authority="CpipJ" test_range="" version="1">CpipJ_1,Supercontig,Culex quinquefasciatus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS234" taxid="7719" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Ciona intestinalis</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS68" taxid="9598" source="Chromosome" authority="CHIMP" test_range="" version="2.1">CHIMP_2.1,Chromosome,Pan troglodytes</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS401" taxid="7240" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Drosophila simulans</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS314" taxid="9315" source="Scaffold" authority="Meug" test_range="" version="1.0">Meug_1.0,Scaffold,Macropus eugenii</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS338" taxid="7227" source="Chromosome" authority="BDGP" test_range="" version="5.13">BDGP_5.13,Chromosome,Drosophila melanogaster</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS226" taxid="6239" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Caenorhabditis elegans</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS245" taxid="7227" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Drosophila melanogaster</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS181" taxid="37347" source="Gene Scaffold" authority="TREESHREW" test_range="">TREESHREW,Gene Scaffold,Tupaia belangeri</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS64" taxid="13616" source="Chromosome" authority="BROADO" test_range="" version="3">BROADO_3,Chromosome,Monodelphis domestica</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS279" taxid="9598" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Pan troglodytes</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS356" taxid="9103" source="Scaffold" authority="UMD" test_range="" version="2">UMD_2,Scaffold,Meleagris gallopavo</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS407" taxid="7260" source="Scaffold" authority="dwil_r" test_range="" version="1.3_FB2008_07">dwil_r_1.3_FB2008_07,Scaffold,Drosophila willistoni</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS192" taxid="9978" source="Scaffold" authority="pika" test_range="">pika,Scaffold,Ochotona princeps</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS428" taxid="33178" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Aspergillus terreus</COORDINATES>

coordinates/registry_coordinates.xml  view on Meta::CPAN

  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS11" taxid="9606" source="Protein Sequence" authority="NCBI" test_range="" version="35">NCBI_35,Protein Sequence,Homo sapiens</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS255" taxid="9593" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Gorilla gorilla</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS394" taxid="7234" source="Scaffold" authority="dper_r" test_range="" version="1.3_FB2008_07">dper_r_1.3_FB2008_07,Scaffold,Drosophila persimilis</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS306" taxid="8364" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Xenopus tropicalis</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS91" taxid="37347" source="Chromosome" authority="TREESHREW" test_range="">TREESHREW,Chromosome,Tupaia belangeri</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS148" taxid="9685" source="Scaffold" authority="CAT" test_range="">CAT,Scaffold,Felis catus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS173" taxid="9365" source="Gene Scaffold" authority="HEDGEHOG" test_range="">HEDGEHOG,Gene Scaffold,Erinaceus europaeus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS476" taxid="4533" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Oryza brachyantha</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS89" taxid="9365" source="Chromosome" authority="HEDGEHOG" test_range="">HEDGEHOG,Chromosome,Erinaceus europaeus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS133" taxid="30538" source="Chromosome" authority="vicPac" test_range="" version="1">vicPac_1,Chromosome,Vicugna pacos</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS325" taxid="9315" source="Chromosome" authority="VEGA" test_range="" version="35">VEGA_35,Chromosome,Macropus eugenii</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS110" taxid="7955" source="Scaffold" authority="ZFISH" test_range="" version="7">ZFISH_7,Scaffold,Danio rerio</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS30" taxid="10090" source="Chromosome" authority="NCBI m" test_range="" version="34">NCBI m_34,Chromosome,Mus musculus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS351" taxid="9593" source="Supercontig" authority="gorGor" test_range="" version="2">gorGor_2,Supercontig,Gorilla gorilla</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS158" taxid="8364" source="Scaffold" authority="JGI" test_range="" version="4.1">JGI_4.1,Scaffold,Xenopus tropicalis</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS95" taxid="10090" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Mus musculus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS414" taxid="5057" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Aspergillus clavatus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS374" taxid="31234" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Caenorhabditis remanei</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS223" taxid="7165" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Anopheles gambiae</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS286" taxid="132908" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Pteropus vampyrus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS34" taxid="4932" source="Gene_ID" authority="SGD" test_range="" version="32">SGD_32,Gene_ID,Saccharomyces cerevisiae</COORDINATES>

coordinates/registry_coordinates.xml  view on Meta::CPAN

  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS278" taxid="8090" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Oryzias latipes</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS22" taxid="10090" source="Gene_ID" authority="MGI" test_range="">MGI,Gene_ID,Mus musculus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS339" taxid="9823" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Sus scrofa</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS435" taxid="5141" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Neurospora crassa</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS221" taxid="28377" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Anolis carolinensis</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS179" taxid="42254" source="Gene Scaffold" authority="COMMON_SHREW" test_range="" version="1">COMMON_SHREW_1,Gene Scaffold,Sorex araneus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS42" taxid="10090" source="Contig" authority="NCBI m" test_range="" version="35">NCBI m_35,Contig,Mus musculus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS295" taxid="31033" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Takifugu rubripes</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS426" taxid="5062" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Aspergillus oryzae</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS367" taxid="135651" source="Supercontig" authority="CB" test_range="" version="601">CB_601,Supercontig,Caenorhabditis brenneri</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS345" taxid="9315" source="Chromosome" authority="VEGA" test_range="">VEGA,Chromosome,Macropus eugenii</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS219" taxid="7955" source="Chromosome" authority="Zv" test_range="" version="8">Zv_8,Chromosome,Danio rerio</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS430" taxid="33178" source="Supercontig" authority="CADR" test_range="" version="E">CADR_E,Supercontig,Aspergillus terreus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS266" taxid="9978" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Ochotona princeps</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS439" taxid="4896" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Schizosaccharomyces pombe</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS20" taxid="10116" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Rattus norvegicus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS184" taxid="30538" source="Scaffold" authority="vicPac" test_range="" version="1">vicPac_1,Scaffold,Vicugna pacos</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS276" taxid="30611" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Otolemur garnettii</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS217" taxid="7159" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Aedes aegypti</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS138" taxid="9606" source="Supercontig" authority="NCBI" test_range="" version="36">NCBI_36,Supercontig,Homo sapiens</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS365" taxid="135651" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Caenorhabditis brenneri</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS469" taxid="9103" source="Chromosome" authority="UMD" test_range="" version="2">UMD_2,Chromosome,Meleagris gallopavo</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS427" taxid="5062" source="Chromosome" authority="CADR" test_range="" version="E">CADR_E,Chromosome,Aspergillus oryzae</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS341" taxid="9823" source="Chromosome" authority="Sscrofa" test_range="" version="9">Sscrofa_9,Chromosome,Sus scrofa</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS315" taxid="9315" source="Gene Scaffold" authority="Meug" test_range="" version="1.0">Meug_1.0,Gene Scaffold,Macropus eugenii</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS235" taxid="7719" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Ciona intestinalis</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS246" taxid="9371" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Echinops telfairi</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS113" taxid="39946" source="Chromosome" authority="BGI" test_range="" version="2005-01">BGI_2005-01,Chromosome,Oryza sativa indica</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS313" taxid="9606" source="Supercontig" authority="GRCh" test_range="" version="37">GRCh_37,Supercontig,Homo sapiens</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS425" taxid="5062" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Aspergillus oryzae</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS225" taxid="9913" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Bos taurus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS124" taxid="99883" source="Chromosome" authority="TETRAODON" test_range="">TETRAODON,Chromosome,Tetraodon nigroviridis</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS317" taxid="9315" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Macropus eugenii</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS60" taxid="9031" source="Chromosome" authority="WASHUC" test_range="" version="1">WASHUC_1,Chromosome,Gallus gallus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS380" taxid="7217" source="Gene_ID" authority="Ensembl" test_range="">Ensembl,Gene_ID,Drosophila ananassae</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS61" taxid="69293" source="Chromosome" authority="BROADS" test_range="" version="1">BROADS_1,Chromosome,Gasterosteus aculeatus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS189" taxid="30608" source="Gene Scaffold" authority="micMur" test_range="" version="1">micMur_1,Gene Scaffold,Microcebus murinus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS337" taxid="9483" source="Supercontig" authority="calJac" test_range="" version="3">calJac_3,Supercontig,Callithrix jacchus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS122" taxid="9978" source="Chromosome" authority="pika" test_range="">pika,Chromosome,Ochotona princeps</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS447" taxid="5855" source="Chromosome" authority="EPr" test_range="" version="2">EPr_2,Chromosome,Plasmodium vivax</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS58" taxid="7227" source="Chromosome" authority="BDGP" test_range="" version="4.3">BDGP_4.3,Chromosome,Drosophila melanogaster</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS290" taxid="42254" source="Protein Sequence" authority="Ensembl" test_range="">Ensembl,Protein Sequence,Sorex araneus</COORDINATES>
  <COORDINATES uri="http://www.dasregistry.org/dasregistry/coordsys/CS_DS119" taxid="7227" source="Chromosome" authority="BDGP" test_range="">BDGP,Chromosome,Drosophila melanogaster</COORDINATES>



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