Bio-MUST-Apps-TwoScalp

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test/PTHR22663-ts-s2s.ali  view on Meta::CPAN

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>RNF212B-Pan troglodytes@ENSPTRP00000057417
M*DWFHCNECFRK***D***GAHFFVTSCGHIFCKKCVTL*********************EKCAVCETACKHL*ALSDNLKPQEKMFFKSP***VETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEA***********QQALVS********************QDKELSVL***RKE****NG**************ELKKFL****AILKESPSR**YQGSRS*ITPRP********...
>RNF212B-Callithrix jacchus@ENSCJAP00000014518
M*DWFHCNQCFRK***D***GAHFFITSCGHIFCKKCVTL*********************EKCAVCGTACKHL*ALSDNLKPQEKMFFKSP***VETALQYFSHISQVWSFQKKQTDLLLAFYKHRITKLETAMQEA***********QQALVS********************QDKELSVL***RKE****NG**************ELKKLL****AILKESPSW**YQGSRS*TTPRP********...
>RNF212B-Gorilla gorilla@ENSGGOP00000002158
M*DWFHCNQCFRK***D***GAHFFVTSCGHIFCKKCVTL*********************EKCAVCGTACKHL*ALSDNLKPQEKMFFKSP***VETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEA***********QQALVS********************QD*************************************************************************...
>RNF212B-Homo sapiens@ENSP00000382794
M*DWFHCNQCFRK***D***GAHFFVTSCGHIFCKKCVTL*********************EKCAVCGTACKHL*ALSDNLKPQEKMFFKSP***VETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEA***********QQALVS********************QDKELSVL***RKE****NG**************ELKKFL****AILKESPSR**YQGSRS*ITPRP********...
>RNF212B-Homo sapiens@ENSP00000397830
M*DWFHCNQCFRK***D***GAHFFVTSCGHIFCKKCVTL*********************EKCAVCGTACKHL*ALSDNLKPQEKMFFKSP***VETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEA***********QQALVS********************QDKELSVL***RKE****NG**************ELKKFL****AILKESPSR**YQGSRS*ITPRP********...
>RNF212B-Papio anubis@ENSPANP00000013986
M*DWFHCNQCFRK***D***GAHFFVTSCGHIFCKTCVTL*********************EKCAVCGTACKHL*ALSDNLKPQEKMFFKSP***VETALQYFSHISQVWSFQKKQTDLLVAFYKHRITKLETAMQEA***********QQALVS********************QDKELSVL***RKE****NG**************ELKKFL****AILKESPSR**YQGSRS*TTPRP********...

test/PTHR22663-ts-s2s.ali  view on Meta::CPAN

M*DWFHCNQCFRK***D***GDHFFVTSCGHIFCKKCVTL*********************EKCTLCGTACKHL*ALSGNLKPQEKIYFKSP***VETALQYFSHISQVWRFQKKQTDLLIAFYKHRITKLEAAMQEA***********QQTVTS********************QEKELSVL***KKE****NA**************ELKKCL****AILKESPNW**YQGSRS*ATPRP********...
>RNF212B-Canis lupus@ENSCAFP00000032433
M*DWFHCNQCFRK***D***GDHFFVTSCGHIFCKKCVTL*********************EKCTLCGTACKHL*ALSGNLKPQEKIYFKSP***VETALQYFSHISQVWRFQKKQTDLLIAFYKHRITKLEAAMQEA***********QQTVTS********************QEKELSVL***KKE****NA**************ELKKCL****AILKESPNW**YQGSRS*ATPRP********...
>RNF212B-Equus caballus@ENSECAP00000023006
M*DWFHCNQCFRK***D***GAHFFVTSCGHIFCKKCVTL*********************EKCAVCGTACKHL*ALSDNLKPQEKMYFKSP***VETALQYFNHISQVWSFQKKQTDLLIAFYKHRITKLEAAVQEA***********QQTVTS********************QDKELSVL***RKE****NG**************ELKKYL****AILKESPSW**YQGSRS*TTPRP********...
>RNF212B-Bos taurus@ENSBTAP00000036259
M*DWFHCNRCFRK***D***GAHFFVTNCGHIFCKKCVIL*********************EKCAVCGTACKYL*ALSDNLKPQEKMYFRNP***VETALQYFSHISQVWSFQKKQTDLLIAFYKHRITELEAAMQES***********QQTLTN********************QDKELSVL***RKE****NG**************ELKKFQ****AIMKESPSW**YQGSRL*NTPRP********...
>RNF212B-Ovis aries@ENSOARP00000020786
M*DWFHCNRCFRK***D***GAHFFVTNCGHIFCKRCVIL*********************EKCAVCGTACKYL*ALSDNLKPQEKMYFKNP***VETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLEAAMQES***********QQTLTN********************QDKELSVL***RKE****NG**************ELKKFQ****AIVKESPSW**YQGSRL*NTPRP********...
>RNF212B-Vicugna pacos@ENSVPAP00000000569
M*DWFHCNKCFRK***D***GAQFFVTS*GLILCKKCVTM*********************EKCAVCETACKYL*ALSDNLKPQEKMYFKSP***VETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLEAAMQEA***********QQTLTN********************QDKELSVL***RKE****NG**************EFHHIG****ANSQESPSW**YQGNRL*TTPRP********...
>RNF212B-Tursiops truncatus@ENSTTRP00000008288
M*DWFHCNLCFQK***D***GAHFFVTSCGHIFCKKCLTL*********************DKCAVCGTACKYL*ALSDNLKPQEKMYFKSP***VETALQYFSHISQVWSFQKKQSDLLIAFYKHRITKLEAATQEA***********QQTLTN********************QDKELSVL***RKE****NG**************ELKKLL****AILKESPSW**YQGSRS*TTPRP********...
>RNF212B-Dipodomys ordii@ENSDORP00000002692
M*DWFHCNRCFRK***D***GAHFFVTSCGHIFCKHCMTL*********************XXXXVCGTSFKYL*ALSDNLKPQEKMFFKSP***VDTALKYFSHISQVWH*QKKQTDLL*AFYKHRITKLEAAMQEA***********RQTMAN********************QNKELSIL***KKE****NG**************ELKKFL****AILKESPVQ**YQGSRF*TTPRL********...
>RNF212B-Loxodonta africana@ENSLAFP00000017326
M*DWFHCNQCFRK***D***GAHFFVTSCGHIFCKKCVTL*********************EKCAVCGAACKHL*ALSDNVSFYPPXCSSKA***CETALQYFSHISQVWRFQKKQTDLLIAFYKHRISKLEADIQEA***********QQTVAS********************QDKELSVL***RKE****NR**************ELKKFL****AILKESPSR**YQGSRS*TTPRP********...
>RNF212B-Pteropus vampyrus@ENSPVAP00000004985
M*DWFHCNRCFRK***D***GAHFFVTNCGHIFCRKCVTL*********************GKCFICRAACKHL*ALSDNXXXXXXXXXXXX***XXXXXXXXXXXXXVWSFQKKQTDLLIAFYKHRITKLEAVVQEA***********QQTVTS********************QDKELSVL***RKE****NG**************ELKKFL****AILKESPTW**YQGSRS*MTPRP********...
>RNF212B-Procavia capensis@ENSPCAP00000005336
M*DWFHCNQCFRK***D***GAHFFVTNCGHIFCKKCVTL*********************EKCAVCGAACKHL*ALSDNLKPQEKMFFKNP***VETALEYFSHISQVWSFQKKQTDLLIAFYKHRITKLEADIQEA***********QQTVAS********************QDKELSVL***RKE****NG**************ELKKFL****AILKESPSQ**YQGSRS*IIPRP********...
>RNF212B-Myotis lucifugus@ENSMLUP00000021606
M*DWFHCNRCFRK***D***GTHYFVTSCGHIFCKKCVTL*********************EKCSVCGAACKHL*ALSDKMKPQEKMYFKNP***VETALQHFSHISQVWSFQKKQTDLLIAFYKHRITKLEAAMQEA***********RQTVAS********************QNKELSVL***RKE****NG**************ELKKFL****AILKESPSW**YQGSRP*TTPRP********...
>RNF212B-Monodelphis domestica@ENSMODP00000005618
M*DWFHCNQCFRK***D***GTHFFVTSCGHIFCKKCVTK*********************EKCAVCGATCKHL*ALSDNLKPQEKMFFKSP***VETALKYFSHISQVWSFQKKQTDLLITFYKHRLSKSEAAMQEA***********QRTVAS********************QDKELVIL***RKE****NG**************ELKKFL****AILKESPSR**CQGSRS*TTPRP********...
>RNF212B-Sarcophilus harrisii@ENSSHAP00000017075
M*DWFHCNQCFQK***D***GTHFFVTSCGHIFCKKCVTK*********************EKCAVCGAACKHL*ALSDNLKPQEKMFFKSP***VETALKYFSHISQVWSFQKKQTDLLITFYKHRLSKSEAAMQEA***********QRTVAS********************QDKELVVL***RKE****NG**************ELKKFL****AILKESPSR**CQVNRS*TIPRP********...

test/PTHR22663.ali  view on Meta::CPAN

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>RNF212B-Pan troglodytes@ENSPTRP00000057417
M*DWFHCNECFRKD***GAHFFVTSCGHIFCKKCVTL***EKCAVCETACKHLALSDNLKPQEKMFFKSPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEAQQALVSQDKELSVLRKE****NGELKKFLAILKESPSR**YQGSRSITPRPVGITSPSQSVTP**RPSFQHSSQVV***SRSSSAES*******IPYREAGF*GSLG*QGG*RG*LQGRRTPRDSYNETPSPASTHS...
>RNF212B-Callithrix jacchus@ENSCJAP00000014518
M*DWFHCNQCFRKD***GAHFFITSCGHIFCKKCVTL***EKCAVCGTACKHLALSDNLKPQEKMFFKSPVETALQYFSHISQVWSFQKKQTDLLLAFYKHRITKLETAMQEAQQALVSQDKELSVLRKE****NGELKKLLAILKESPSW**YQGSRSTTPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSVESI*****PIPYREAGF*GSFG*QGG*RG*PQERRTPRNPCNETPSPASTHS...
>RNF212B-Gorilla gorilla@ENSGGOP00000002158
M*DWFHCNQCFRKD***GAHFFVTSCGHIFCKKCVTL***EKCAVCGTACKHLALSDNLKPQEKMFFKSPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEAQQALVSQD************************************************************************************************************************TPSPASTHS...
>RNF212B-Homo sapiens@ENSP00000382794
M*DWFHCNQCFRKD***GAHFFVTSCGHIFCKKCVTL***EKCAVCGTACKHLALSDNLKPQEKMFFKSPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEAQQALVSQDKELSVLRKE****NGELKKFLAILKESPSR**YQGSRSITPRPVGITSPSQSVTP**RPSFQHSSQVV***SRSSSAES*******IPYREAGF*GSLG*QGG*RG*LQGRRTPRDSYNETPSPASTHS...
>RNF212B-Homo sapiens@ENSP00000397830
M*DWFHCNQCFRKD***GAHFFVTSCGHIFCKKCVTL***EKCAVCGTACKHLALSDNLKPQEKMFFKSPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLETAMQEAQQALVSQDKELSVLRKE****NGELKKFLAILKESPSR**YQGSRSITPRPVGITSPSQSVTP**RPSFQHSSQVV***SRSSSAES*******IPYREAGF*GSLG*QGG*RG*LQGRRTPRDSYNETPSPASTHS...
>RNF212B-Papio anubis@ENSPANP00000013986
M*DWFHCNQCFRKD***GAHFFVTSCGHIFCKTCVTL***EKCAVCGTACKHLALSDNLKPQEKMFFKSPVETALQYFSHISQVWSFQKKQTDLLVAFYKHRITKLETAMQEAQQALVSQDKELSVLRKE****NGELKKFLAILKESPSR**YQGSRSTTPRPVGITSPSQSVTP**RPSFQHSSQVV***SRSSSAES*******IPYREAGF*GGLG*QGG*RG*LQGRRTPRDSYNETPSPASTHS...

test/PTHR22663.ali  view on Meta::CPAN

M*DWFHCNQCFRKD***GDHFFVTSCGHIFCKKCVTL***EKCTLCGTACKHLALSGNLKPQEKIYFKSPVETALQYFSHISQVWRFQKKQTDLLIAFYKHRITKLEAAMQEAQQTVTSQEKELSVLKKE****NAELKKCLAILKESPNW**YQGSRSATPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSAES*******IPYRVSGF*SSLG*AGA*RG*LQGRSTPRDSYIETPSPSSTHS...
>RNF212B-Canis lupus@ENSCAFP00000032433
M*DWFHCNQCFRKD***GDHFFVTSCGHIFCKKCVTL***EKCTLCGTACKHLALSGNLKPQEKIYFKSPVETALQYFSHISQVWRFQKKQTDLLIAFYKHRITKLEAAMQEAQQTVTSQEKELSVLKKE****NAELKKCLAILKESPNW**YQGSRSATPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSAES*******IPYRVSGF*SSLG*AGA*RG*LQGRSTPRDSYIETPSPSSTHS...
>RNF212B-Equus caballus@ENSECAP00000023006
M*DWFHCNQCFRKD***GAHFFVTSCGHIFCKKCVTL***EKCAVCGTACKHLALSDNLKPQEKMYFKSPVETALQYFNHISQVWSFQKKQTDLLIAFYKHRITKLEAAVQEAQQTVTSQDKELSVLRKE****NGELKKYLAILKESPSW**YQGSRSTTPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSVES*******IPYRVAGF*GSLG*QGA*RG*LQGRSTPRDSFTETPSPASTHS...
>RNF212B-Bos taurus@ENSBTAP00000036259
M*DWFHCNRCFRKD***GAHFFVTNCGHIFCKKCVIL***EKCAVCGTACKYLALSDNLKPQEKMYFRNPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITELEAAMQESQQTLTNQDKELSVLRKE****NGELKKFQAIMKESPSW**YQGSRLNTPRPVGITSPSQSVTP**RPISQHSSQVV***SRSSSVES*******TPYRMAGF*SNLG*QGA*RG*LQGRSTPRDSFTVTPSPASTHS...
>RNF212B-Ovis aries@ENSOARP00000020786
M*DWFHCNRCFRKD***GAHFFVTNCGHIFCKRCVIL***EKCAVCGTACKYLALSDNLKPQEKMYFKNPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLEAAMQESQQTLTNQDKELSVLRKE****NGELKKFQAIVKESPSW**YQGSRLNTPRPVGITSPSQSVAP**RPISQHSSQVV***SRSSSVES*******TPYRMAGF*SDLG*QGA*RG*LQGRSTPRDSFTETPSPASTHS...
>RNF212B-Vicugna pacos@ENSVPAP00000000569
M*DWFHCNKCFRKD***GAQFFVTS*GLILCKKCVTM***EKCAVCETACKYLALSDNLKPQEKMYFKSPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKLEAAMQEAQQTLTNQDKELSVLRKE****NGEFHHIGANSQESPSW**YQGNRLTTPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSVES*******IPYRVAGF*SILG*QGA*RG*LQGRSTPRDSYTETPSPASTQS...
>RNF212B-Tursiops truncatus@ENSTTRP00000008288
M*DWFHCNLCFQKD***GAHFFVTSCGHIFCKKCLTL***DKCAVCGTACKYLALSDNLKPQEKMYFKSPVETALQYFSHISQVWSFQKKQSDLLIAFYKHRITKLEAATQEAQQTLTNQDKELSVLRKE****NGELKKLLAILKESPSW**YQGSRSTTPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSVES*******ILYRGAGF*SNLG*QGA*RA*LQGRSTPRDSFTETPSPASTHS...
>RNF212B-Dipodomys ordii@ENSDORP00000002692
M*DWFHCNRCFRKD***GAHFFVTSCGHIFCKHCMTL***XXXXVCGTSFKYLALSDNLKPQEKMFFKSPVDTALKYFSHISQVWH*QKKQTDLL*AFYKHRITKLEAAMQEARQTMANQNKELSILKKE****NGELKKFLAILKESPVQ**YQGSRFTTPRLMGITSPSQSVTP**RPSSQHSSQVV***SRPSSVES*******IPYRATVF*GSAG*QGG*RG*LQERSTPRNSYIETPSPASTQS...
>RNF212B-Loxodonta africana@ENSLAFP00000017326
M*DWFHCNQCFRKD***GAHFFVTSCGHIFCKKCVTL***EKCAVCGAACKHLALSDNVSFYPPXCSSKACETALQYFSHISQVWRFQKKQTDLLIAFYKHRISKLEADIQEAQQTVASQDKELSVLRKE****NRELKKFLAILKESPSR**YQGSRSTTPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSVES*******TPYRVAGF*GSLG*QGV*RC*LQGRSTPRDSYIETPSPASTYS...
>RNF212B-Pteropus vampyrus@ENSPVAP00000004985
M*DWFHCNRCFRKD***GAHFFVTNCGHIFCRKCVTL***GKCFICRAACKHLALSDNXXXXXXXXXXXXXXXXXXXXXXXXXVWSFQKKQTDLLIAFYKHRITKLEAVVQEAQQTVTSQDKELSVLRKE****NGELKKFLAILKESPTW**YQGSRSMTPRPVGITSPSQSVTP**RPSSQHSSQVV***SRPSSVES*******IPYRVAGL*SSMG*QGA*RG*LQERSTPRDSYTETPSPASTHS...
>RNF212B-Procavia capensis@ENSPCAP00000005336
M*DWFHCNQCFRKD***GAHFFVTNCGHIFCKKCVTL***EKCAVCGAACKHLALSDNLKPQEKMFFKNPVETALEYFSHISQVWSFQKKQTDLLIAFYKHRITKLEADIQEAQQTVASQDKELSVLRKE****NGELKKFLAILKESPSQ**YQGSRSIIPRPVGITSPSQSVTP**RPSSQHSSQVV***SRSSSVES*******TPYRVAGF*GSLG*QGV*RG*LQGRNTPRDSYTXXXXXXXXXX...
>RNF212B-Myotis lucifugus@ENSMLUP00000021606
M*DWFHCNRCFRKD***GTHYFVTSCGHIFCKKCVTL***EKCSVCGAACKHLALSDKMKPQEKMYFKNPVETALQHFSHISQVWSFQKKQTDLLIAFYKHRITKLEAAMQEARQTVASQNKELSVLRKE****NGELKKFLAILKESPSW**YQGSRPTTPRPVGITSPTQSVTP**RPSCQHSSQVV***SRSSSVES*******IPYRVAGFSSSVG*QGA*RG*VQGRSTPSDSYTETPSPASTHS...
>RNF212B-Monodelphis domestica@ENSMODP00000005618
M*DWFHCNQCFRKD***GTHFFVTSCGHIFCKKCVTK***EKCAVCGATCKHLALSDNLKPQEKMFFKSPVETALKYFSHISQVWSFQKKQTDLLITFYKHRLSKSEAAMQEAQRTVASQDKELVILRKE****NGELKKFLAILKESPSR**CQGSRSTTPRPVGITSPSQSVTP**RPTSQNSNQVV***SQPSSLES*******IPYRVSGF*GSFGQQGN*RG*LQGRNTSRESYTDTPSPASTNS...
>RNF212B-Sarcophilus harrisii@ENSSHAP00000017075
M*DWFHCNQCFQKD***GTHFFVTSCGHIFCKKCVTK***EKCAVCGAACKHLALSDNLKPQEKMFFKSPVETALKYFSHISQVWSFQKKQTDLLITFYKHRLSKSEAAMQEAQRTVASQDKELVVLRKE****NGELKKFLAILKESPSR**CQVNRSTIPRPVGITSPSQSVTS**RPSSQHSDQVV***SRSSSLES*******IPYRVSHF*GCFGQQGN*RG*LQGRITPRESYTDTSSPASTNS...

test/in2.idl  view on Meta::CPAN

sp|D4GVD7|CETZ1_HALVD Tubulin-like protein CetZ1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ1 PE=1 SV=1
sp|D4GTC1|CETZ2_HALVD Tubulin-like protein CetZ2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ2 PE=1 SV=1
sp|A0B5R2|CETZ_METTP Tubulin-like protein CetZ OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=cetZ PE=1 SV=1
sp|D4GU26|CETZ5_HALVD Tubulin-like protein CetZ5 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ5 PE=3 SV=1
sp|D4GW48|CETZ3_HALVD Tubulin-like protein CetZ3 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ3 PE=3 SV=1
sp|Q9V0H5|CETZ_PYRAB Tubulin-like protein CetZ OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=cetZ PE=3 SV=1
sp|D4GU81|CETZ6_HALVD Tubulin-like protein CetZ6 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ6 PE=3 SV=1
sp|D4GQ67|CETZ4_HALVD Tubulin-like protein CetZ4 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ4 PE=3 SV=1
sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=3 SV=1
sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1

test/nonal-group_21.fasta  view on Meta::CPAN

-------------------------------MSKRGK--------------SKR------
----SH--R-------CAVFL--------SV------V----------------------
------------------------------------------------------------
------------LCAG--------------------------------------------
------------------LFTGCGD-----------------------------------
-----------------------------------------------KKAVEI-------
-------------------------STGSTA------AEKDVRDPYDGQSIDEQP---NI
TETD--TPPAEPHQASLE--NAAQE-----------------------------------
----NVD---------YSETFGGLN--------GC-------------------------
-------AV----VF---------------------------------DPQEQVCRFYNK
TL----CETAVSPCSTFKIVSALMGLKYHVL--E----NE-NSTMGYD-GTQ-YG-N---
--------AAW-----------NQD-LSLKDAFQSSCVWYFRKVIDQVGQERVKEELTAL
DYGNCNISEWAG------SGINPGEELNGFWLA----------SSLKISPYEQVRVLSDI
FEGRTGF-SPEHVKIVKNIM-----------S--------A------------DGGGIYG
KTGT-----------------G----T--KG--------------------Q--------
-------AWFVGF-S--ES----E-------EKR-T-YFAV---------YLE-----DT
-----D------N---------R----EQV--------------SSK----KAKEIALK-
II------------------G--Q------------------
>BLARSTAAU|BLAR1|no|no-Cellulosilyticum_ruminicola_GCF_001311925.1@WP_054741192.1
------------------------------------------------------------
-------MNSK--------------------MRN--------------------------

test/nonal-group_21.fasta  view on Meta::CPAN

ENNTEISIYGKTGMGKAEGIVVDAWFTGFAETLEGNKYFCVYLGQSDAGNTSSTAAKEIA
IQILNDNK
>GCF_900036035.1|WP_064786658.1
MIGILVGIFAFSGCTNHNNSDAKNIQQDTKDPTPEKFSVVESQEPTLTEVDWSNYFEGLT
GTAIVYDPTEKNYMIYNKELALTQRSPCSTFKIISSLIGLENGIIDPDNSVRPWSGEIFW
NEDWNRDINFSDAFRTSCVWYFRQVTDDIGKVKMQNELNKLKYGNCDISDWEGKLNTNNN
NRALTGFWIESSLKISPKEQVEVMERIFGTDSTYSERTQNILKQVMLISEENNTEISIYG
KTGMGKAEGIVVDAWFTGFAETLEGNKYFCVYLGQSDAGNTSSTAAKEIAIQILNDNK
>GCF_000466465.2|WP_021633768.1
MSKRGKSKRSHRCAVFLSVVLCAGLFTGCGDKKAVEISTGSTAAEKDVRNPYDGQSIDEQ
PNITETDTPPAEPHQASPENAAQENVDYSEAFGGLNGCAVVFDPQEQVCRFYNKTLCETA
VSPCSTFKIVSALMGLKYHVLENENSTMGYDGTQYGNAAWNQDLSLKDAFQSSCVWYFRK
VIDQVGQERVKEELTALDYGNCNISEWAGSGINPGEELNGFWLASSLKISPYGQVRVLSD
IFEGRTGFSPEHVKIVKNIMSADGGGIYGKTGTGTKGQAWFVGFSESEEKRTYFAVYLED
TDNREQVSSKKAKEIALKIIGQ
>GCF_000378365.1|WP_018999519.1
MFKTLVKIICVITICLFTTNCTSAENSTSSSNQNTSMQTTQTTKNSIDLSSYFENINGTA
VFYTPDINTYNIYNDELSTKQSSPCSTFKIFSTYVALDNKTIDINNSLRKWNGTIYWYDA
WNKDIDLDTAFKTSCVWYYRQVIDEIGQDTMQKYIDKFDYGNKDISDWDGKTDLDDDPRD
LKGFWLETSLKISPLEQVQLLNRLFSTNENPMALAKLKELMLVYEDNNTGLKIYGKTGFG
KVNGENTDAWFTGFYEINNQQTYYSVRLDDPKNPQALSSTAKEIAINIIKNLNK

test/seq_in2.fasta  view on Meta::CPAN

>sp|D4GVD7|CETZ1_HALVD Tubulin-like protein CetZ1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ1 PE=1 SV=1
MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQ
SRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLA
KHLKRIYTEPVYGLGILPGSDEGGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESVQ
GGYDEINEEIVNRFGVLFGAGEVQDGQEVAESVVDSSEIINTLAGGGVSTVGYASEGVEP
RKNNGGGLLSRLTGGDEPDDNLDTAHTTNRITSLVRKAALGRLTLPCEIEGAERALLVLA
GPPEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQ
VAIEAQDNIEEIRQESDSNLETLINDDEDELESLF
>sp|D4GTC1|CETZ2_HALVD Tubulin-like protein CetZ2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ2 PE=1 SV=1
MKTVLIGVGQAGGKLASALQSFDRQTGFGAVLDAVAVNTAKADLQSLPVETVLIGQDRVN
GHGVGGDNELGAAVMESDQTEVMSALDGRVTAEAESIFVVAGLGGGSGSGGAPVLAKALA
GVYDVPVYVLGILPGADEGALYQVNAGRSLKTVAREADAVLLVDNDAFRSAGESMSEGYD
AINEAIARRVGLLLAAGEATEGVGESVVDTSEVINTLRSGGIAALGYASAEASPNAEDNI
NAVMSTTRRAVLTGTSLPDASDADAALVVIAGEPDTIPRKGVERARRWVEDETGSMQVRG
GDFPLESGRLASLVLLGGVERSERVESFMERAREAIDKAETEPREDPKGMWHSDDLDDLL
>sp|A0B5R2|CETZ_METTP Tubulin-like protein CetZ OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=cetZ PE=1 SV=1
MLNVLMLGVGQCGNRILDAVNRQAFGGSRLAKYYSKQRFPSRVETIAINTAINDLKELKF
TAAKDRLHVPNLHGVGANRSKGKQGFWENQEMILEEIEKRGDFDLIFVMTSVSGGTGSSF
SPLMIHELKKRYKNATIVPIAVLPFREEGTIYLQNAAFCLREMIEVEADGMILVDNQYLK
RFSGDIASAYDRINTMVAQRLLFLIEALDSEMLSVTDLGDFKTVMNGGLRMGTLGYYQAD
KKSPSIRAAIKNSLREVGLLYPANVDAGEAGRAMIVIQGSREYLNVDEITKEIESLTETI
GHVFKGIVIKKGEPRVLSVLSLERAPGLVELYEKAKWAIQEERERKDRARSELYEAFEQI
NDLEEIY
>sp|D4GU26|CETZ5_HALVD Tubulin-like protein CetZ5 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ5 PE=3 SV=1
MKVLCFGMGQAGGNVLDALLRYEQRTNADYVVDAVAYNTASADLRGLDLVPEENRILFGA
DEVSGHGVGADNELAAELAERDSRQLLRGTDGAPTSTADAFLIFAGLGGGTGSGAAPVLA
KHLNRIYEQPIYGVGILPAADEGALYSRNAARSLKALVDVTDHVFAFDNGAWAESGEDVA
QAHDTMNEVLVRRLGILFASGEVAESGTVAESVVDSSEVINTLRGGGISTIGYAASELPE
SDGGGGFSIKGLLGGDSSSTDELDSINRITTQTRKAVLGQLTLPCDVDSASRGLVVVSGP
PEWLNRKAVERSRTWVEEQTGSMEVRGGDYPLSESNHVGVLVLLGDVSRSDRVAEIRSTA
VEAEQNRRERIASDAADREDGTEAVVDDRLDSLF
>sp|D4GW48|CETZ3_HALVD Tubulin-like protein CetZ3 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ3 PE=3 SV=1
MKLALIGIGQAGGKVVDALVDYERRTKTGFVVDAIAVNSARADLRGLRTAPESRQVLVGL
TRVKGHGVGADNELGAEVIAEDVGEVLSMIDDLPVHEIDAFLVVAGLGGGTGSGGAPVIA
RELKHIYTEPVYGLGILPARDEGGIYTLNAARSFQTFVREVDNLIVFDNDAWRKTGESLE
AGYGSLNAELARRLGVLFSAGEGDGSGAVAESVVDASEIINTLGSGGVSTIGYAAVELDR
PKRGLLSRLSGGKAEADDGGDSTNRITSLVRRAALGRLTLPCEISGAERGLVVVAGPSDV
LSRRGIERARTWLEDETGTMEIRGGDYPIDSNFVAAVVLLSGVYDVPRVKELQAVAIETQ
RDMLAKRESSAASLDDLVSTGDDRIEPLF
>sp|Q9V0H5|CETZ_PYRAB Tubulin-like protein CetZ OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=cetZ PE=3 SV=1
MRAIIIGIGQCGGKIADIFSLVDFEAIAINTSRGDLEYLKHIPQDKRILIGESIVGGKGV
NANPVLGREAMKRDLPMVMKKINSMVGYEDVDIFFLTFGFGGGTGAGGTPVLAEALKEEY
PDSLVVAIGALPLKEEGIRPTINAAITIDKLSKVVDSIIAIDNNKLKESDEDISQAYERI
NYTIVERIASLLALIDVPGEQTLDASDLKFVLRAMGSFATVGYAKADAEKVKSLSRLIIR
SFENEGLYLDVSLESALYGLVAIHGPPEVLKAKDIFEALNELTQRIRGKQIFRGFYPDPR
ERSVEVVTLLSGIYESKSIEDIILTAKKYAREFMKAKEEGEAKKRELLSGLPDFDDVYSG
EESEG
>sp|D4GU81|CETZ6_HALVD Tubulin-like protein CetZ6 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ6 PE=3 SV=1
MNVFCFGAGKAGGRVVEQLLEYERQRNPDFISGAAACDTTAADLDALELIPEDARALFGA
TETNGQGFDGDAERGAAAAADEHRKLLEPTDDAPIAASDAFVVCAGLGGGTGGPTAAVLA
ERLSEVYDQPVYGVGIFSTATTDQQHASNTLRSLRQLVSKTDHVFGFDTAAWVKNEDEPI
SDEAYDTLNAELARRLGTLFAAGEVTTADDVGASVVDASEIMNTLRGGGLATLGYSERPL
PPRDTSVVGRLKRLVGDDAESVDQIDSLNRITTQTREAVRGQLTLSCDIGSASRGLLVIT
GRPAWLNRDAISQNQGWIEEQTGSLEVRNGDDPRPDADALSVLVLLGGINPTAQLTALQA
VADAGDSGDA
>sp|D4GQ67|CETZ4_HALVD Tubulin-like protein CetZ4 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ4 PE=3 SV=1
MKLGVVGLGQAGGKIVDALLEYDQRTNCHIVHDALTVNTATADLNALEHIPADARVLIGK
SQVGGQGVGGDNELGATITTEDITEIQHVIDTISVHEIDAFLLVAALGGGTGSGALPVVG
RHLKQLYTEPVYGLGILPSTNEGGLYSLNAARSLQTAVRELDNLLIFDNDAHRQANESLT
GGYAAINRELATRLGVLFGAGDIDTGTANPESVVDASEIINTLKGGGVSTLGYASQSLEE
EDGAEAAGLLSRFKRESSTDSAGGTNRITSLVRRATLGRLTLPVEPANVSIDRGLVIVAG
PSDCLNRKGIERGRTWVEEQTGCLSIRGGDYPLPESNTVAVVVLFSGISGADRLHELRSI
GSEAQTTGAERTGSSDRHLESILGDDADELDSLF
>sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=3 SV=1
MRAIIIGIGQCGTKIADIFSLVDFEALAINTSKSDLEYLKHIPPERRILVGESIVGGKGV
NANPLLGREAMKRDLPMVMKKISSLVGYEDVDIFFLTFGFGGGTGAGGTPVLAEALKEEY
PDSLVVAIGALPLKEEGIRPTINAAITIDKLSRIVDSIIAIDNNKLKESDEDISQAYEKI
NYAIVERIASLLALIDVPGEQTLDASDLKFVLRAMGSFATVGYAKADATKIKSLSRLIIR
SFENEGLYLDVNLESALYGLVAIHGPPEVLKAKEIFDALSELSQRIRGKQIFRGFYPDPR
EREVEVVTLLSGIYESKSIENIVITAKRYAREFMKAKEEGEMKKRELLKGLPDFEDIYPG
EVDEG
>sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
MRAIIIGIGQCGTKIADIFSLVDFEALAINTSRGDLEYLKHIPPDRRILIGESIVGGKGV
NANPVLGREAMKRDLPMVMKKISSLVGFEDVDIFFLTFGFGGGTGAGGTPVLAEALKEEY
PDSLVVAIGALPLKEEGIRPTINAAITIDKLSKIVDSIIAIDNNKLKESNEDISQAYERI
NYAIVERIASLLALIDVPGEQTLDASDLKFVLRAMGSFATVGYAKADATKIKSLSRLIIR
SFENEGLYLDVNIESALYGLVAIHGPPEALKANEIFEALNELTQRIRGKQIFRGFYPDPR
EREVEVVTLLSGIYESKSIEEIVITAKKYAQEFLKAKEEGESKKKKLLSGLPDFDDIYPG
EADDQS
>sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1
MRALIIGVGQCGTKIADLFALVDFDTIALNTSRGDLEYLKHIPHDRRILIGESITGGKGV
NANPLLGREAMKRDLPLVMRKIGSIVGYEDVDIFFLTFGFGGGTGAGGTPVLAEALKEEY
PDSLVVAIGALPLKEEGIRPTINAAITIDKLSKVADSIIAIDNNKLKESGDDISSAYEKI
NYTIVERIASLLALVDVPGEQTLDASDLKFVLKAFGSFATVGYAKADASKVKNLSRLIIK
SFESEGLYLDANIESALYGLVAIHGPPEVLKASDIFEALDYLTSKIRGKQIFRGFYPDPR
ERDVEVVTLLSGIYESKSIENIVRTAKEYARSFMQAKSEAETKKKELLTGLPDFDDVYPS
LEATGSDDPEGFAEYREVSR

test/seq_out2_mafft.fasta  view on Meta::CPAN

>sp|D4GVD7|CETZ1_HALVD Tubulin-like protein CetZ1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ1 PE=1 SV=1
-MKLAMIGFGQAGGKVVD----------KFVEYDRERNAGIVRAAVAVNSAKADLLGLKN
IPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHE-VDAFLVVSGLG
GGTGSGGAPVLAKHLKRIY-TEPVYGLGILPGSDEGGIYTLNAARSFQTFVR-EVDNLLV
FDNDAWRKTGES--VQGGYDEINEEIVNRFGVLFGAGEVQDGQEVAESVVDSSEIINTLA
G-GGVSTVGYAS-EGVEPRKNNG---GGLLSRLTGGD-EPDDNLDTAHTTNRITSLVRKA
ALG----RLTLPCEIEGA--ERALLVLAGPPEHLNRKGIERGRKWIEEQTG----SMEVR
GGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAIEAQDNIEEIRQESDSNLET----LI
NDDEDELESLF----------------------
>sp|D4GTC1|CETZ2_HALVD Tubulin-like protein CetZ2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ2 PE=1 SV=1
-MKTVLIGVGQAGGKLAS----------ALQSFDRQTGFGAVLDAVAVNTAKADLQSL--
-PVET-VLIGQDRVNGHGVGGDNELGAAVMESDQTEVMSALDGRVTAE-AESIFVVAGLG
GGSGSGGAPVLAKALAGVY-DVPVYVLGILPGADEGALYQVNAGRSLKTVAR-EADAVLL
VDNDAFRSAGES--MSEGYDAINEAIARRVGLLLAAGEATEG--VGESVVDTSEVINTLR
S-GGIAALGYASAE------------------------ASPNAED---NINAVMSTTRRA
VLT----GTSLP-DASDA--DAALVVIAGEPDTIPRKGVERARRWVEDETG----SMQVR
GGDFPL-ESGRLASLVLLGGVERSERVESFMERAREAIDKAETEPREDPKGMWH------
---SDDLDDLL----------------------
>sp|A0B5R2|CETZ_METTP Tubulin-like protein CetZ OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=cetZ PE=1 SV=1
MLNVLMLGVGQCGNRILDAVNRQAFGGSRLAKYYSKQRFPSRVETIAINTAINDLKELKF
TAAKDRLHVP----NLHGVGANRSKGKQGFWENQEMILEEIEKRGD---FDLIFVMTSVS
GGTGSSFSPLMIHELKKRYKNATIVPIAVLPFREEGTIYLQNAAFCLREMIEVEADGMIL
VDNQYLKRFSGD--IASAYDRINTMVAQRLLFLIEALDS-----EMLSVTDLGDFKTVMN
GGLRMGTLGYYQA-------------------------------DK--KSPSIRAAIKNS
LREV---GLLYPANVDAGEAGRAMIVIQGSREYLNVDEITKEIESLTETIGHVFKGIVIK
KG-----EPRVLSVLSL----ERAPGLVELYEKAKWAIQEERERKDRARSELYE----AF
-EQINDLEEIY----------------------
>sp|D4GU26|CETZ5_HALVD Tubulin-like protein CetZ5 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ5 PE=3 SV=1
-MKVLCFGMGQAGGNVLD----------ALLRYEQRTNADYVVDAVAYNTASADLRGLDL
VPEENRILFGADEVSGHGVGADNELAAELAERDSRQLLRGTDGAPTST-ADAFLIFAGLG
GGTGSGAAPVLAKHLNRIY-EQPIYGVGILPAADEGALYSRNAARSLKALVD-VTDHVFA
FDNGAWAESGED--VAQAHDTMNEVLVRRLGILFASGEVAESGTVAESVVDSSEVINTLR
G-GGISTIGYAASELPESDGGGGFSIKGLL----GGDSSSTDELD---SINRITTQTRKA
VLG----QLTLPCDVDSA--SRGLVVVSGPPEWLNRKAVERSRTWVEEQTG----SMEVR
GGDYPLSESNHVGVLVLLGDVSRSDRVAEIRSTAVEAEQNRRERIASDAADREDGTEAVV
---DDRLDSLF----------------------
>sp|D4GW48|CETZ3_HALVD Tubulin-like protein CetZ3 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ3 PE=3 SV=1
-MKLALIGIGQAGGKVVD----------ALVDYERRTKTGFVVDAIAVNSARADLRGLRT
APESRQVLVGLTRVKGHGVGADNELGAEVIAEDVGEVLSMIDDLPVHE-IDAFLVVAGLG
GGTGSGGAPVIARELKHIY-TEPVYGLGILPARDEGGIYTLNAARSFQTFVR-EVDNLIV
FDNDAWRKTGES--LEAGYGSLNAELARRLGVLFSAGEGDGSGAVAESVVDASEIINTLG
S-GGVSTIGYAAVELDRPKR-------GLLSRLSGGKAEADDGGD---STNRITSLVRRA
ALG----RLTLPCEISGA--ERGLVVVAGPSDVLSRRGIERARTWLEDETG----TMEIR
GGDYPI-DSNFVAAVVLLSGVYDVPRVKELQAVAIETQRDMLAKRESSAASLDD----LV
STGDDRIEPLF----------------------
>sp|Q9V0H5|CETZ_PYRAB Tubulin-like protein CetZ OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=cetZ PE=3 SV=1
-MRAIIIGIGQCGGKIADI--------FSLVDFE----------AIAINTSRGDLEYLKH
IPQDKRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKINSMVGYEDVDIFFLTFGFG
GGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-VVDSIIA
IDNNKLKESDED--ISQAYERINYTIVERIASLLALIDV-----PGEQTLDASDLKFVLR
AMGSFATVGYAKA-----------------------------------DAEKVKSLSRLI
IRSFENEGLYLDVSLESA--LYGLVAIHGPPEVLKAKDIFEALNELTQRIR----GKQIF
RGFYPDPRERSVEVVTLLSGIYESKSIEDIILTAKKYAREFMKAKEEGEAKKRE----LL
-SGLPDFDDVYSGEESEG---------------
>sp|D4GU81|CETZ6_HALVD Tubulin-like protein CetZ6 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ6 PE=3 SV=1
-MNVFCFGAGKAGGRVVE----------QLLEYERQRNPDFISGAAACDTTAADLDALEL
IPEDARALFGATETNGQGFDGDAERGAAAAADEHRKLLEPTDDAPIAA-SDAFVVCAGLG
GGTGGPTAAVLAERLSEVY-DQPVYGVGIFSTATTDQQHASNTLRSLRQLVS-KTDHVFG
FDTAAWVKNEDEPISDEAYDTLNAELARRLGTLFAAGEVTTADDVGASVVDASEIMNTLR
G-GGLATLGYSERPLPPRDT----SVVGRLKRLVGDDAESVDQID---SLNRITTQTREA
VRG----QLTLSCDIGSA--SRGLLVITGRPAWLNRDAISQNQGWIEEQTG----SLEVR
NGDDPRPDADALSVLVLLGGINPTAQLTALQAVA--------------------------
-DAGDSGDA------------------------
>sp|D4GQ67|CETZ4_HALVD Tubulin-like protein CetZ4 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ4 PE=3 SV=1
-MKLGVVGLGQAGGKIVD----------ALLEYDQRTNCHIVHDALTVNTATADLNALEH
IPADARVLIGKSQVGGQGVGGDNELGATITTEDITEIQHVIDTISVHE-IDAFLLVAALG
GGTGSGALPVVGRHLKQLY-TEPVYGLGILPSTNEGGLYSLNAARSLQTAVR-ELDNLLI
FDNDAHRQANES--LTGGYAAINRELATRLGVLFGAGDIDTGTANPESVVDASEIINTLK
G-GGVSTLGYASQSLEEEDGAEA---AGLLSRF-----KRESSTDSAGGTNRITSLVRRA
TLG----RLTLPVEPANVSIDRGLVIVAGPSDCLNRKGIERGRTWVEEQTG----CLSIR
GGDYPLPESNTVAVVVLFSGISGADRLHELRSIGSEAQTTGAERTGSSDRHLES----IL
GDDADELDSLF----------------------
>sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=3 SV=1
-MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSKSDLEYLKH
IPPERRILVGESIVGGKGVNANPLLGREAMKRDLPMVMKKISSLVGYEDVDIFFLTFGFG
GGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSR-IVDSIIA
IDNNKLKESDED--ISQAYEKINYAIVERIASLLALIDV-----PGEQTLDASDLKFVLR
AMGSFATVGYAKA-----------------------------------DATKIKSLSRLI
IRSFENEGLYLDVNLESA--LYGLVAIHGPPEVLKAKEIFDALSELSQRIR----GKQIF
RGFYPDPREREVEVVTLLSGIYESKSIENIVITAKRYAREFMKAKEEGEMKKRE----LL
-KGLPDFEDIYPGEVDEG---------------
>sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
-MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSRGDLEYLKH
IPPDRRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKISSLVGFEDVDIFFLTFGFG
GGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-IVDSIIA
IDNNKLKESNED--ISQAYERINYAIVERIASLLALIDV-----PGEQTLDASDLKFVLR
AMGSFATVGYAKA-----------------------------------DATKIKSLSRLI
IRSFENEGLYLDVNIESA--LYGLVAIHGPPEALKANEIFEALNELTQRIR----GKQIF
RGFYPDPREREVEVVTLLSGIYESKSIEEIVITAKKYAQEFLKAKEEGESKKKK----LL
-SGLPDFDDIYPGEADDQS--------------
>sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1
-MRALIIGVGQCGTKIADL--------FALVDFD----------TIALNTSRGDLEYLKH
IPHDRRILIGESITGGKGVNANPLLGREAMKRDLPLVMRKIGSIVGYEDVDIFFLTFGFG
GGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-VADSIIA
IDNNKLKESGDD--ISSAYEKINYTIVERIASLLALVDV-----PGEQTLDASDLKFVLK
AFGSFATVGYAKA-----------------------------------DASKVKNLSRLI
IKSFESEGLYLDANIESA--LYGLVAIHGPPEVLKASDIFEALDYLTSKIR----GKQIF
RGFYPDPRERDVEVVTLLSGIYESKSIENIVRTAKEYARSFMQAKSEAETKKKE----LL
-TGLPDFDDVYPSLEATGSDDPEGFAEYREVSR

test/seq_profile_out.fasta  view on Meta::CPAN

>tr|M0BQF2|M0BQF2_9EURY Cell division protein FtsZ OS=Haloterrigena salina JCM 13891 GN=ftsZ PE=3 SV=1
--MDSIIDDAID----EAETGEQSEVPDDAPPQGDQSAGDASDGH----RTGTMTDDELE
DVLQDLQTDITVVGCGGAGGNTVNRMHEEGIHGAKL---------------VAANT---D
VQHLVEIEADTKILMGEEKTGGRGAGSLPQVGEEAALESQQDIYDAIDG------SDMVF
VTAGLGGGTGTGSAPVVAKAAREA--GALTISIVTTPFTAEGEVRRTNAEAGLERLRD-V
SDTVIVVPNDRLLDSVGKLPVRQAFKVSDEVLMRSVKGITELITK-----PGLVNLDFAD
VRTVMER-GGVAMIGLGESD----------------------------------SEAKAE
DSVKTALRSPL-LDVDISGA--SSALVNVTGGNDM----AIEEAEGVVEEIYDRIDPDAR
IIWGTSIDEQLEGSMRTMIVVTGV-ESPQIYGRPD-EE----T-----------------
--VQPEMTG-QA----G---GDDIDFVD----------------------
>sp|D4GVD7|CETZ1_HALVD Tubulin-like protein CetZ1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ1 PE=1 SV=1
------------------------------------------------------------
-------MKLAMIGFGQAGGKVVD----------KFVEYDRERNAGIVRAAVAVNSAKAD
LLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHE-VDAFL
VVSGLGGGTGSGGAPVLAKHLKRIY-TEPVYGLGILPGSDEGGIYTLNAARSFQTFVR-E
VDNLLVFDNDAWRKTGES--VQGGYDEINEEIVNRFGVLFGAGEVQDGQEVAESVVDSSE
IINTLAG-GGVSTVGYAS-EGVEPRKNNG---GGLLSRLTGGD-EPDDNLDTAHTTNRIT
SLVRKAALGRLTLPCEIEGA--ERALLVLAGPPEHLNRKGIERGRKWIEEQTG-----SM
EVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAI---EAQ------------DNIE
EIRQESDSNLETLINDD---EDELESLF----------------------
>sp|D4GTC1|CETZ2_HALVD Tubulin-like protein CetZ2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ2 PE=1 SV=1
------------------------------------------------------------
-------MKTVLIGVGQAGGKLAS----------ALQSFDRQTGFGAVLDAVAVNTAKAD
LQSL---PVET-VLIGQDRVNGHGVGGDNELGAAVMESDQTEVMSALDGRVTAE-AESIF
VVAGLGGGSGSGGAPVLAKALAGVY-DVPVYVLGILPGADEGALYQVNAGRSLKTVAR-E
ADAVLLVDNDAFRSAGES--MSEGYDAINEAIARRVGLLLAAGEATEG--VGESVVDTSE
VINTLRS-GGIAALGYASAE------------------------ASPNAED---NINAVM
STTRRAVLTGTSLP-DASDA--DAALVVIAGEPDTIPRKGVERARRWVEDETG-----SM
QVRGGDFPL-ESGRLASLVLLGGVERSERVESFMERAR---EAI------------DKAE
TEPREDPKGMWH--------SDDLDDLL----------------------
>sp|A0B5R2|CETZ_METTP Tubulin-like protein CetZ OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=cetZ PE=1 SV=1
------------------------------------------------------------
------MLNVLMLGVGQCGNRILDAVNRQAFGGSRLAKYYSKQRFPSRVETIAINTAIND
LKELKFTAAKDRLHV----PNLHGVGANRSKGKQGFWENQEMILEEIEKRGD---FDLIF
VMTSVSGGTGSSFSPLMIHELKKRYKNATIVPIAVLPFREEGTIYLQNAAFCLREMIEVE
ADGMILVDNQYLKRFSGD--IASAYDRINTMVAQRLLFLIEALDS-----EMLSVTDLGD
FKTVMNGGLRMGTLGYYQADKKSPSIRAA-----------------------------IK
NSLREV---GLLYPANVDAGEAGRAMIVIQGSREYLNVDEITKEIESLTETIGHVF-KGI
VIKKG-----EPRVLSVLSL----ERAPGLVELYEKAK---WAI------------QEER
ERKDRARSELYEAFEQ----INDLEEIY----------------------
>sp|D4GU26|CETZ5_HALVD Tubulin-like protein CetZ5 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ5 PE=3 SV=1
------------------------------------------------------------
-------MKVLCFGMGQAGGNVLD----------ALLRYEQRTNADYVVDAVAYNTASAD
LRGLDLVPEENRILFGADEVSGHGVGADNELAAELAERDSRQLLRGTDGAPTST-ADAFL
IFAGLGGGTGSGAAPVLAKHLNRIY-EQPIYGVGILPAADEGALYSRNAARSLKALVD-V
TDHVFAFDNGAWAESGED--VAQAHDTMNEVLVRRLGILFASGEVAESGTVAESVVDSSE
VINTLRG-GGISTIGYAASELPESDGGGGFSIKGLL----GGDSSSTDELD---SINRIT
TQTRKAVLGQLTLPCDVDSA--SRGLVVVSGPPEWLNRKAVERSRTWVEEQTG-----SM
EVRGGDYPLSESNHVGVLVLLGDVSRSDRVAEIRSTAV---EAE------------QNRR
ERIASDAADRED--GTEAVVDDRLDSLF----------------------
>sp|D4GW48|CETZ3_HALVD Tubulin-like protein CetZ3 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ3 PE=3 SV=1
------------------------------------------------------------
-------MKLALIGIGQAGGKVVD----------ALVDYERRTKTGFVVDAIAVNSARAD
LRGLRTAPESRQVLVGLTRVKGHGVGADNELGAEVIAEDVGEVLSMIDDLPVHE-IDAFL
VVAGLGGGTGSGGAPVIARELKHIY-TEPVYGLGILPARDEGGIYTLNAARSFQTFVR-E
VDNLIVFDNDAWRKTGES--LEAGYGSLNAELARRLGVLFSAGEGDGSGAVAESVVDASE
IINTLGS-GGVSTIGYAAVELDRPKR-------GLLSRLSGGKAEADDGGD---STNRIT
SLVRRAALGRLTLPCEISGA--ERGLVVVAGPSDVLSRRGIERARTWLEDETG-----TM
EIRGGDYPI-DSNFVAAVVLLSGVYDVPRVKELQAVAI---ETQ------------RDML
AKRESSAASLDDLVSTG---DDRIEPLF----------------------
>sp|Q9V0H5|CETZ_PYRAB Tubulin-like protein CetZ OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGGKIADI--------FSLVDFE----------AIAINTSRGD
LEYLKHIPQDKRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKINSMVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-V
VDSIIAIDNNKLKESDED--ISQAYERINYTIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKADAEKVKS---------LSRL---------------------
-IIRSFENEGLYLDVSLESA--LYGLVAIHGPPEVLKAKDIFEALNELTQRIR-----GK
QIFRGFYPDPRERSVEVVTLLSGIYESKSIEDIILTAK---KYA------------REFM
KAKEEGEAKKRELLSG----LPDFDDVYSGEESEG---------------
>sp|D4GU81|CETZ6_HALVD Tubulin-like protein CetZ6 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ6 PE=3 SV=1
------------------------------------------------------------
-------MNVFCFGAGKAGGRVVE----------QLLEYERQRNPDFISGAAACDTTAAD
LDALELIPEDARALFGATETNGQGFDGDAERGAAAAADEHRKLLEPTDDAPIAA-SDAFV
VCAGLGGGTGGPTAAVLAERLSEVY-DQPVYGVGIFSTATTDQQHASNTLRSLRQLVS-K
TDHVFGFDTAAWVKNEDEPISDEAYDTLNAELARRLGTLFAAGEVTTADDVGASVVDASE
IMNTLRG-GGLATLGYSERPLPPRDT----SVVGRLKRLVGDDAESVDQID---SLNRIT
TQTREAVRGQLTLSCDIGSA--SRGLLVITGRPAWLNRDAISQNQGWIEEQTG-----SL
EVRNGDDPRPDADALSVLVLLGGINPTAQLTALQAVAD---A------------------
--------------GDS---GDA---------------------------
>sp|D4GQ67|CETZ4_HALVD Tubulin-like protein CetZ4 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ4 PE=3 SV=1
------------------------------------------------------------
-------MKLGVVGLGQAGGKIVD----------ALLEYDQRTNCHIVHDALTVNTATAD
LNALEHIPADARVLIGKSQVGGQGVGGDNELGATITTEDITEIQHVIDTISVHE-IDAFL
LVAALGGGTGSGALPVVGRHLKQLY-TEPVYGLGILPSTNEGGLYSLNAARSLQTAVR-E
LDNLLIFDNDAHRQANES--LTGGYAAINRELATRLGVLFGAGDIDTGTANPESVVDASE
IINTLKG-GGVSTLGYASQSLEEEDGAEA---AGLLSRF-----KRESSTDSAGGTNRIT
SLVRRATLGRLTLPVEPANVSIDRGLVIVAGPSDCLNRKGIERGRTWVEEQTG-----CL
SIRGGDYPLPESNTVAVVVLFSGISGADRLHELRSIGS---EAQ------------TTGA
ERTGSSDRHLESILGDD---ADELDSLF----------------------
>sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSKSD
LEYLKHIPPERRILVGESIVGGKGVNANPLLGREAMKRDLPMVMKKISSLVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSR-I
VDSIIAIDNNKLKESDED--ISQAYEKINYAIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKADATKIKS---------LSRL---------------------
-IIRSFENEGLYLDVNLESA--LYGLVAIHGPPEVLKAKEIFDALSELSQRIR-----GK
QIFRGFYPDPREREVEVVTLLSGIYESKSIENIVITAK---RYA------------REFM
KAKEEGEMKKRELLKG----LPDFEDIYPGEVDEG---------------
>sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSRGD
LEYLKHIPPDRRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKISSLVGFEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-I
VDSIIAIDNNKLKESNED--ISQAYERINYAIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKADATKIKS---------LSRL---------------------
-IIRSFENEGLYLDVNIESA--LYGLVAIHGPPEALKANEIFEALNELTQRIR-----GK
QIFRGFYPDPREREVEVVTLLSGIYESKSIEEIVITAK---KYA------------QEFL
KAKEEGESKKKKLLSG----LPDFDDIYPGEADDQS--------------
>sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRALIIGVGQCGTKIADL--------FALVDFD----------TIALNTSRGD
LEYLKHIPHDRRILIGESITGGKGVNANPLLGREAMKRDLPLVMRKIGSIVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-V
ADSIIAIDNNKLKESGDD--ISSAYEKINYTIVERIASLLALVDV-----PGEQTLDASD
LKFVLKAFGSFATVGYAKADASKVKN---------LSRL---------------------
-IIKSFESEGLYLDANIESA--LYGLVAIHGPPEVLKASDIFEALDYLTSKIR-----GK
QIFRGFYPDPRERDVEVVTLLSGIYESKSIENIVRTAK---EYA------------RSFM
QAKSEAETKKKELLTG----LPDFDDVYPSLEATGSDDPEGFAEYREVSR

test/seq_profiles2_clustal.fasta  view on Meta::CPAN

>sp|D4GVD7|CETZ1_HALVD Tubulin-like protein CetZ1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ1 PE=1 SV=1
------------------------------------------------------------
-------MKLAMIGFGQAGGKVVD----------KFVEYDRERNAGIVRAAVAVNSAKAD
LLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHE-VDAFL
VVSGLGGGTGSGGAPVLAKHLKRIY-TEPVYGLGILPGSDEGGIYTLNAARSFQTFVR-E
VDNLLVFDNDAWRKTGES--VQGGYDEINEEIVNRFGVLFGAGEVQDGQEVAESVVDSSE
IINTLAG-GGVSTVGYAS-EGVEPRKNNG---GGLLSRLTGGD-EPDDNLDTAHTTNRIT
SLVRKAALG----RLTLPCEIEGA--ERALLVLAGPPEHLNRKGIERGRKWIEEQTG---
-SMEVRGGDYPIPG-AEKVAGVILLSGVTNVPRIKELQQVAI---EA-------QDNIEE
IRQESDSNLET-----LINDDEDELESLF----------------------
>sp|D4GTC1|CETZ2_HALVD Tubulin-like protein CetZ2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ2 PE=1 SV=1
------------------------------------------------------------
-------MKTVLIGVGQAGGKLAS----------ALQSFDRQTGFGAVLDAVAVNTAKAD
LQSL---PVET-VLIGQDRVNGHGVGGDNELGAAVMESDQTEVMSALDGRVTAE-AESIF
VVAGLGGGSGSGGAPVLAKALAGVY-DVPVYVLGILPGADEGALYQVNAGRSLKTVAR-E
ADAVLLVDNDAFRSAGES--MSEGYDAINEAIARRVGLLLAAGEATEG--VGESVVDTSE
VINTLRS-GGIAALGYASAE------------------------ASPNAED---NINAVM
STTRRAVLT----GTSLP-DASDA--DAALVVIAGEPDTIPRKGVERARRWVEDETG---
-SMQVRGGDFPL-E-SGRLASLVLLGGVERSERVESFMERAR---EA-------IDKAET
EPREDPKGMWH----------SDDLDDLL----------------------
>sp|A0B5R2|CETZ_METTP Tubulin-like protein CetZ OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=cetZ PE=1 SV=1
------------------------------------------------------------
------MLNVLMLGVGQCGNRILDAVNRQAFGGSRLAKYYSKQRFPSRVETIAINTAIND
LKELKFTAAKDRLHVP----NLHGVGANRSKGKQGFWENQEMILEEIEKRGD---FDLIF
VMTSVSGGTGSSFSPLMIHELKKRYKNATIVPIAVLPFREEGTIYLQNAAFCLREMIEVE
ADGMILVDNQYLKRFSGD--IASAYDRINTMVAQRLLFLIEALDS-----EMLSVTDLGD
FKTVMNGGLRMGTLGYYQA-------------------------------DK--KSPSIR
AAIKNSLREV---GLLYPANVDAGEAGRAMIVIQGSREYLNVDEITKEIESLTETIGHVF
KGIVIKKG-----E-PRVLSVLSL----ERAPGLVELYEKAK---WA-------IQEERE
RKDRARSELYE-----AF-EQINDLEEIY----------------------
>sp|D4GU26|CETZ5_HALVD Tubulin-like protein CetZ5 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ5 PE=3 SV=1
------------------------------------------------------------
-------MKVLCFGMGQAGGNVLD----------ALLRYEQRTNADYVVDAVAYNTASAD
LRGLDLVPEENRILFGADEVSGHGVGADNELAAELAERDSRQLLRGTDGAPTST-ADAFL
IFAGLGGGTGSGAAPVLAKHLNRIY-EQPIYGVGILPAADEGALYSRNAARSLKALVD-V
TDHVFAFDNGAWAESGED--VAQAHDTMNEVLVRRLGILFASGEVAESGTVAESVVDSSE
VINTLRG-GGISTIGYAASELPESDGGGGFSIKGLL----GGDSSSTDELD---SINRIT
TQTRKAVLG----QLTLPCDVDSA--SRGLVVVSGPPEWLNRKAVERSRTWVEEQTG---
-SMEVRGGDYPLSE-SNHVGVLVLLGDVSRSDRVAEIRSTAV---EA-------EQNRRE
RIASDAADRED-GTEAVV---DDRLDSLF----------------------
>sp|D4GW48|CETZ3_HALVD Tubulin-like protein CetZ3 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ3 PE=3 SV=1
------------------------------------------------------------
-------MKLALIGIGQAGGKVVD----------ALVDYERRTKTGFVVDAIAVNSARAD
LRGLRTAPESRQVLVGLTRVKGHGVGADNELGAEVIAEDVGEVLSMIDDLPVHE-IDAFL
VVAGLGGGTGSGGAPVIARELKHIY-TEPVYGLGILPARDEGGIYTLNAARSFQTFVR-E
VDNLIVFDNDAWRKTGES--LEAGYGSLNAELARRLGVLFSAGEGDGSGAVAESVVDASE
IINTLGS-GGVSTIGYAAVELDRPKR-------GLLSRLSGGKAEADDGGD---STNRIT
SLVRRAALG----RLTLPCEISGA--ERGLVVVAGPSDVLSRRGIERARTWLEDETG---
-TMEIRGGDYPI-D-SNFVAAVVLLSGVYDVPRVKELQAVAI---ET-------QRDMLA
KRESSAASLDD-----LVSTGDDRIEPLF----------------------
>sp|Q9V0H5|CETZ_PYRAB Tubulin-like protein CetZ OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGGKIADI--------FSLVDFE----------AIAINTSRGD
LEYLKHIPQDKRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKINSMVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-V
VDSIIAIDNNKLKESDED--ISQAYERINYTIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKA-----------------------------------DAEKVK
SLSRLIIRSFENEGLYLDVSLESA--LYGLVAIHGPPEVLKAKDIFEALNELTQRIR---
-GKQIFRGFYPDPR-ERSVEVVTLLSGIYESKSIEDIILTAK---KY-------AREFMK
AKEEGEAKKRE-----LL-SGLPDFDDVYSGEESEG---------------
>sp|D4GU81|CETZ6_HALVD Tubulin-like protein CetZ6 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ6 PE=3 SV=1
------------------------------------------------------------
-------MNVFCFGAGKAGGRVVE----------QLLEYERQRNPDFISGAAACDTTAAD
LDALELIPEDARALFGATETNGQGFDGDAERGAAAAADEHRKLLEPTDDAPIAA-SDAFV
VCAGLGGGTGGPTAAVLAERLSEVY-DQPVYGVGIFSTATTDQQHASNTLRSLRQLVS-K
TDHVFGFDTAAWVKNEDEPISDEAYDTLNAELARRLGTLFAAGEVTTADDVGASVVDASE
IMNTLRG-GGLATLGYSERPLPPRDT----SVVGRLKRLVGDDAESVDQID---SLNRIT
TQTREAVRG----QLTLSCDIGSA--SRGLLVITGRPAWLNRDAISQNQGWIEEQTG---
-SLEVRNGDDPRPD-ADALSVLVLLGGINPTAQLTALQAVA-------------------
-------------------DAGDSGDA------------------------
>sp|D4GQ67|CETZ4_HALVD Tubulin-like protein CetZ4 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ4 PE=3 SV=1
------------------------------------------------------------
-------MKLGVVGLGQAGGKIVD----------ALLEYDQRTNCHIVHDALTVNTATAD
LNALEHIPADARVLIGKSQVGGQGVGGDNELGATITTEDITEIQHVIDTISVHE-IDAFL
LVAALGGGTGSGALPVVGRHLKQLY-TEPVYGLGILPSTNEGGLYSLNAARSLQTAVR-E
LDNLLIFDNDAHRQANES--LTGGYAAINRELATRLGVLFGAGDIDTGTANPESVVDASE
IINTLKG-GGVSTLGYASQSLEEEDGAEA---AGLLSRF-----KRESSTDSAGGTNRIT
SLVRRATLG----RLTLPVEPANVSIDRGLVIVAGPSDCLNRKGIERGRTWVEEQTG---
-CLSIRGGDYPLPE-SNTVAVVVLFSGISGADRLHELRSIGS---EA-------QTTGAE
RTGSSDRHLES-----ILGDDADELDSLF----------------------
>sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSKSD
LEYLKHIPPERRILVGESIVGGKGVNANPLLGREAMKRDLPMVMKKISSLVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSR-I
VDSIIAIDNNKLKESDED--ISQAYEKINYAIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKA-----------------------------------DATKIK
SLSRLIIRSFENEGLYLDVNLESA--LYGLVAIHGPPEVLKAKEIFDALSELSQRIR---
-GKQIFRGFYPDPR-EREVEVVTLLSGIYESKSIENIVITAK---RY-------AREFMK
AKEEGEMKKRE-----LL-KGLPDFEDIYPGEVDEG---------------
>sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSRGD
LEYLKHIPPDRRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKISSLVGFEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-I
VDSIIAIDNNKLKESNED--ISQAYERINYAIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKA-----------------------------------DATKIK
SLSRLIIRSFENEGLYLDVNIESA--LYGLVAIHGPPEALKANEIFEALNELTQRIR---
-GKQIFRGFYPDPR-EREVEVVTLLSGIYESKSIEEIVITAK---KY-------AQEFLK
AKEEGESKKKK-----LL-SGLPDFDDIYPGEADDQS--------------
>sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRALIIGVGQCGTKIADL--------FALVDFD----------TIALNTSRGD
LEYLKHIPHDRRILIGESITGGKGVNANPLLGREAMKRDLPLVMRKIGSIVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-V
ADSIIAIDNNKLKESGDD--ISSAYEKINYTIVERIASLLALVDV-----PGEQTLDASD
LKFVLKAFGSFATVGYAKA-----------------------------------DASKVK
NLSRLIIKSFESEGLYLDANIESA--LYGLVAIHGPPEVLKASDIFEALDYLTSKIR---
-GKQIFRGFYPDPR-ERDVEVVTLLSGIYESKSIENIVRTAK---EY-------ARSFMQ
AKSEAETKKKE-----LL-TGLPDFDDVYPSLEATGSDDPEGFAEYREVSR
>sp|Q57816|FTSZ1_METJA Cell division protein FtsZ 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=ftsZ1 PE=1 SV=1

test/seq_profiles_mafft.fasta  view on Meta::CPAN

>sp|D4GVD7|CETZ1_HALVD Tubulin-like protein CetZ1 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ1 PE=1 SV=1
------------------------------------------------------------
-------MKLAMIGFGQAGGKVVD----------KFVEYDRERNAGIVRAAVAVNSAKAD
LLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHE-VDAFL
VVSGLGGGTGSGGAPVLAKHLKRIY-TEPVYGLGILPGSDEGGIYTLNAARSFQTFVR-E
VDNLLVFDNDAWRKTGES--VQGGYDEINEEIVNRFGVLFGAGEVQDGQEVAESVVDSSE
IINTLAG-GGVSTVGYAS-EGVEPRKNNG---GGLLSRLTGGD-EPDDNLDTAHTTNRIT
SLVRKAALG----RLTLPCEIEGA--ERALLVLAGPPEHLNRKGIERGRKWIEEQTG---
--SMEVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAI---EAQ-----------D
NIEEIRQESDSNLET-----LINDDEDELESLF----------------------
>sp|D4GTC1|CETZ2_HALVD Tubulin-like protein CetZ2 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ2 PE=1 SV=1
------------------------------------------------------------
-------MKTVLIGVGQAGGKLAS----------ALQSFDRQTGFGAVLDAVAVNTAKAD
LQSL---PVET-VLIGQDRVNGHGVGGDNELGAAVMESDQTEVMSALDGRVTAE-AESIF
VVAGLGGGSGSGGAPVLAKALAGVY-DVPVYVLGILPGADEGALYQVNAGRSLKTVAR-E
ADAVLLVDNDAFRSAGES--MSEGYDAINEAIARRVGLLLAAGEATEG--VGESVVDTSE
VINTLRS-GGIAALGYASAE------------------------ASPNAED---NINAVM
STTRRAVLT----GTSLP-DASDA--DAALVVIAGEPDTIPRKGVERARRWVEDETG---
--SMQVRGGDFPL-ESGRLASLVLLGGVERSERVESFMERAR---EAI-----------D
KAETEPREDPKGMWH----------SDDLDDLL----------------------
>sp|A0B5R2|CETZ_METTP Tubulin-like protein CetZ OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=cetZ PE=1 SV=1
------------------------------------------------------------
------MLNVLMLGVGQCGNRILDAVNRQAFGGSRLAKYYSKQRFPSRVETIAINTAIND
LKELKFTAAKDRLHVP----NLHGVGANRSKGKQGFWENQEMILEEIEKRGD---FDLIF
VMTSVSGGTGSSFSPLMIHELKKRYKNATIVPIAVLPFREEGTIYLQNAAFCLREMIEVE
ADGMILVDNQYLKRFSGD--IASAYDRINTMVAQRLLFLIEALDS-----EMLSVTDLGD
FKTVMNGGLRMGTLGYYQA-------------------------------DK--KSPSIR
AAIKNSLREV---GLLYPANVDAGEAGRAMIVIQGSREYLNVDEITKEIESLTETIGHVF
-KGIVIKKG-----EPRVLSVLSL----ERAPGLVELYEKAK---WAI-----------Q
EERERKDRARSELYE-----AF-EQINDLEEIY----------------------
>sp|D4GU26|CETZ5_HALVD Tubulin-like protein CetZ5 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ5 PE=3 SV=1
------------------------------------------------------------
-------MKVLCFGMGQAGGNVLD----------ALLRYEQRTNADYVVDAVAYNTASAD
LRGLDLVPEENRILFGADEVSGHGVGADNELAAELAERDSRQLLRGTDGAPTST-ADAFL
IFAGLGGGTGSGAAPVLAKHLNRIY-EQPIYGVGILPAADEGALYSRNAARSLKALVD-V
TDHVFAFDNGAWAESGED--VAQAHDTMNEVLVRRLGILFASGEVAESGTVAESVVDSSE
VINTLRG-GGISTIGYAASELPESDGGGGFSIKGLL----GGDSSSTDELD---SINRIT
TQTRKAVLG----QLTLPCDVDSA--SRGLVVVSGPPEWLNRKAVERSRTWVEEQTG---
--SMEVRGGDYPLSESNHVGVLVLLGDVSRSDRVAEIRSTAV---EAE-----------Q
NRRERIASDAADREDGT-EAVV---DDRLDSLF----------------------
>sp|D4GW48|CETZ3_HALVD Tubulin-like protein CetZ3 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ3 PE=3 SV=1
------------------------------------------------------------
-------MKLALIGIGQAGGKVVD----------ALVDYERRTKTGFVVDAIAVNSARAD
LRGLRTAPESRQVLVGLTRVKGHGVGADNELGAEVIAEDVGEVLSMIDDLPVHE-IDAFL
VVAGLGGGTGSGGAPVIARELKHIY-TEPVYGLGILPARDEGGIYTLNAARSFQTFVR-E
VDNLIVFDNDAWRKTGES--LEAGYGSLNAELARRLGVLFSAGEGDGSGAVAESVVDASE
IINTLGS-GGVSTIGYAAVELDRPKR-------GLLSRLSGGKAEADDGGD---STNRIT
SLVRRAALG----RLTLPCEISGA--ERGLVVVAGPSDVLSRRGIERARTWLEDETG---
--TMEIRGGDYPI-DSNFVAAVVLLSGVYDVPRVKELQAVAI---ETQ-----------R
DMLAKRESSAASLDD-----LVSTGDDRIEPLF----------------------
>sp|Q9V0H5|CETZ_PYRAB Tubulin-like protein CetZ OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGGKIADI--------FSLVDFE----------AIAINTSRGD
LEYLKHIPQDKRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKINSMVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-V
VDSIIAIDNNKLKESDED--ISQAYERINYTIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKA-----------------------------------DAEKVK
SLSRLIIRSFENEGLYLDVSLESA--LYGLVAIHGPPEVLKAKDIFEALNELTQRIR---
--GKQIFRGFYPDPRERSVEVVTLLSGIYESKSIEDIILTAK---KYA-----------R
EFMKAKEEGEAKKRE-----LL-SGLPDFDDVYSGEESEG---------------
>sp|D4GU81|CETZ6_HALVD Tubulin-like protein CetZ6 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ6 PE=3 SV=1
------------------------------------------------------------
-------MNVFCFGAGKAGGRVVE----------QLLEYERQRNPDFISGAAACDTTAAD
LDALELIPEDARALFGATETNGQGFDGDAERGAAAAADEHRKLLEPTDDAPIAA-SDAFV
VCAGLGGGTGGPTAAVLAERLSEVY-DQPVYGVGIFSTATTDQQHASNTLRSLRQLVS-K
TDHVFGFDTAAWVKNEDEPISDEAYDTLNAELARRLGTLFAAGEVTTADDVGASVVDASE
IMNTLRG-GGLATLGYSERPLPPRDT----SVVGRLKRLVGDDAESVDQID---SLNRIT
TQTREAVRG----QLTLSCDIGSA--SRGLLVITGRPAWLNRDAISQNQGWIEEQTG---
--SLEVRNGDDPRPDADALSVLVLLGGINPTAQLTALQAVA-------------------
-----------------------DAGDSGDA------------------------
>sp|D4GQ67|CETZ4_HALVD Tubulin-like protein CetZ4 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=cetZ4 PE=3 SV=1
------------------------------------------------------------
-------MKLGVVGLGQAGGKIVD----------ALLEYDQRTNCHIVHDALTVNTATAD
LNALEHIPADARVLIGKSQVGGQGVGGDNELGATITTEDITEIQHVIDTISVHE-IDAFL
LVAALGGGTGSGALPVVGRHLKQLY-TEPVYGLGILPSTNEGGLYSLNAARSLQTAVR-E
LDNLLIFDNDAHRQANES--LTGGYAAINRELATRLGVLFGAGDIDTGTANPESVVDASE
IINTLKG-GGVSTLGYASQSLEEEDGAEA---AGLLSRF-----KRESSTDSAGGTNRIT
SLVRRATLG----RLTLPVEPANVSIDRGLVIVAGPSDCLNRKGIERGRTWVEEQTG---
--CLSIRGGDYPLPESNTVAVVVLFSGISGADRLHELRSIGS---EAQ-----------T
TGAERTGSSDRHLES-----ILGDDADELDSLF----------------------
>sp|O59060|CETZ_PYRHO Tubulin-like protein CetZ OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSKSD
LEYLKHIPPERRILVGESIVGGKGVNANPLLGREAMKRDLPMVMKKISSLVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSR-I
VDSIIAIDNNKLKESDED--ISQAYEKINYAIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKA-----------------------------------DATKIK
SLSRLIIRSFENEGLYLDVNLESA--LYGLVAIHGPPEVLKAKEIFDALSELSQRIR---
--GKQIFRGFYPDPREREVEVVTLLSGIYESKSIENIVITAK---RYA-----------R
EFMKAKEEGEMKKRE-----LL-KGLPDFEDIYPGEVDEG---------------
>sp|Q8U0S7|CETZ_PYRFU Tubulin-like protein CetZ OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRAIIIGIGQCGTKIADI--------FSLVDFE----------ALAINTSRGD
LEYLKHIPPDRRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKISSLVGFEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-I
VDSIIAIDNNKLKESNED--ISQAYERINYAIVERIASLLALIDV-----PGEQTLDASD
LKFVLRAMGSFATVGYAKA-----------------------------------DATKIK
SLSRLIIRSFENEGLYLDVNIESA--LYGLVAIHGPPEALKANEIFEALNELTQRIR---
--GKQIFRGFYPDPREREVEVVTLLSGIYESKSIEEIVITAK---KYA-----------Q
EFLKAKEEGESKKKK-----LL-SGLPDFDDIYPGEADDQS--------------
>sp|Q9HHD0|CETZ_THEKO Tubulin-like protein CetZ OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=cetZ PE=3 SV=1
------------------------------------------------------------
-------MRALIIGVGQCGTKIADL--------FALVDFD----------TIALNTSRGD
LEYLKHIPHDRRILIGESITGGKGVNANPLLGREAMKRDLPLVMRKIGSIVGYEDVDIFF
LTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSK-V
ADSIIAIDNNKLKESGDD--ISSAYEKINYTIVERIASLLALVDV-----PGEQTLDASD
LKFVLKAFGSFATVGYAKA-----------------------------------DASKVK
NLSRLIIKSFESEGLYLDANIESA--LYGLVAIHGPPEVLKASDIFEALDYLTSKIR---
--GKQIFRGFYPDPRERDVEVVTLLSGIYESKSIENIVRTAK---EYA-----------R
SFMQAKSEAETKKKE-----LL-TGLPDFDDVYPSLEATGSDDPEGFAEYREVSR
>sp|Q57816|FTSZ1_METJA Cell division protein FtsZ 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=ftsZ1 PE=1 SV=1



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