App-GeoCancerPrognosticDatasetsRetriever
view release on metacpan or search on metacpan
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL15207 6 Samples
FTP download: GEO (CEL, XLSX) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE109nnn/GSE109029/
Series Accession: GSE109029 ID: 200109029
122. Divergent biological response to neoadjuvant chemotherapy in muscle-invasive bladder cancer
(Submitter supplied) Despite cisplatin-based neoadjuvant chemotherapy (NAC) 60% of patients with muscle-invasive bladder cancer still have residual invasive disease at radical cystectomy (RC). The NAC-induced biological alterations in these cisplatin...
Organism: Homo sapiens
Type: Expression profiling by array
Platform: GPL22995 133 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE124nnn/GSE124305/
Series Accession: GSE124305 ID: 200124305
123. Molecular subtype classification of urothelial carcinoma in Lynch syndrome
(Submitter supplied) We aimed to provide a molecular description of Lynch syndrome-associated urothelial cancer in relation to molecular subtypes of sporadic bladder cancer. Whole genome mRNA expression profiles of 41 tumors and immunohistochemical s...
Organism: Homo sapiens
Type: Expression profiling by array
Platform: GPL6244 41 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE104nnn/GSE104922/
Series Accession: GSE104922 ID: 200104922
124. UBC9 knockdown in bladder cancer T24 cell lines
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL6884 12 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE52nnn/GSE52519/
Series Accession: GSE52519 ID: 200052519
248. Gene expression data from MGHU3 bladder cancer cells (FGFR3-Y375C) treated with TAK1 siRNA and/or PD173074
(Submitter supplied) The NFκB transcription factor is constitutively active in a number of hematologic and solid tumors, and many signaling pathways implicated in cancer are likely connected to NFκB activation. A critical mediator of NFκB activit...
Organism: Homo sapiens
Type: Expression profiling by array
Dataset: GDS5023 Platform: GPL6244 12 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE52nnn/GSE52452/
Series Accession: GSE52452 ID: 200052452
249. Fibroblast growth factor receptor inhibition effect on malignant urothelial cells deficient in TGFβ-activated kinase 1
Analysis of fibroblast growth factor receptor 3 (FGFR3)-positive, MGHU3 (Y375C) bladder cancer cells depleted for TGFβ-activated kinase 1 (TAK1) then treated with FGFR-specific PD173074 inhibitor. Results provide insight into the integration of TAK1...
Organism: Homo sapiens
Type: Expression profiling by array, transformed count, 2 agent, 2 genotype/variation sets
Platform: GPL6244 Series: GSE52452 12 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS5nnn/GDS5023/
DataSet Accession: GDS5023 ID: 5023
250. Genome-wide expression analysis of VprBP knockdown in DU145 cells
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
Type: Expression profiling by array; Methylation profiling by array
Platforms: GPL8490 GPL6102 48 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE37nnn/GSE37817/
Series Accession: GSE37817 ID: 200037817
268. DNA methylation and expression profiling study for bladder cancer [methylation]
(Submitter supplied) The DNA methylation patterns associated with the development and progression of cancer. The aim of the present study was to identify novel methylation markers that can discriminate between normal and Non-muscle-invasive bladder c...
Organism: Homo sapiens
Type: Methylation profiling by array
Platform: GPL8490 24 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE37nnn/GSE37816/
Series Accession: GSE37816 ID: 200037816
269. DNA methylation and expression profiling study for bladder cancer [gene expression]
(Submitter supplied) The DNA methylation patterns associated with the development and progression of cancer. The aim of the present study was to identify novel methylation markers that can discriminate between normal and Non-muscle-invasive bladder c...
Organism: Homo sapiens
Type: Expression profiling by array
Platform: GPL6102 24 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE37nnn/GSE37815/
Series Accession: GSE37815 ID: 200037815
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
Type: Expression profiling by array
Platforms: GPL10332 GPL13607 35 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE37nnn/GSE37119/
Series Accession: GSE37119 ID: 200037119
281. FGFR3-shRNA induced transcriptional changes in RT112 bladder cancer cells
(Submitter supplied) Aberrant activation of FGFR3 via overexpression or mutation is a frequent feature of bladder cancer; however, its molecular and cellular consequences and functional relevance to carcinogenesis are not well understood. In this st...
Organism: Homo sapiens
Type: Expression profiling by array
Dataset: GDS4454 Platform: GPL570 24 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE41nnn/GSE41035/
Series Accession: GSE41035 ID: 200041035
282. Fibroblast growth factor receptor 3 depletion effect on bladder cancer cell line RT112
Analysis of bladder cancer cell line RT112 subjected to doxycycline-inducible, shRNA knockdown of FGFR3. Knockdown of FGFR3 in RT112 cells significantly attenuates tumor growth in vitro and in vivo. Results provide insight into the molecular mechanis...
Organism: Homo sapiens
Type: Expression profiling by array, transformed count, 4 genotype/variation, 2 protocol sets
Platform: GPL570 Series: GSE41035 24 Samples
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS4nnn/GDS4454/
DataSet Accession: GDS4454 ID: 4454
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL10332 16 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE26nnn/GSE26032/
Series Accession: GSE26032 ID: 200026032
295. Identification of target genes of tumor suppressor microRNAs in human cancer
(Submitter supplied) To identify target genes of tumor suppressive microRNAs in human cancer, several cell lines (bladder cancer, prostate cancer, renal cell carcinoma, and head and neck squamous cell carcinoma) were subjected to Agilent whole genome...
Organism: Homo sapiens
Type: Expression profiling by array
Platforms: GPL4133 GPL10332 13 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE24nnn/GSE24782/
Series Accession: GSE24782 ID: 200024782
296. Combination of a novel gene expression signature with a clinical nomogram improves the prediction of survival in high-risk bladder cancer Â
(Submitter supplied) Urothelial carcinoma of the bladder is characterized by significant variability in clinical outcomes depending on stage and grade. The addition of molecular information may improve our understanding of such heterogeneity and enha...
Organism: Homo sapiens
Type: Expression profiling by array
Dataset: GDS4456 Platform: GPL570 93 Samples
FTP download: GEO (CEL, TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE31nnn/GSE31684/
Series Accession: GSE31684 ID: 200031684
297. High-risk bladder cancer
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL10850 22 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE22nnn/GSE22380/
Series Accession: GSE22380 ID: 200022380
307. Large scale screening for known fusion genes in cancer cell lines
(Submitter supplied) We have utilized a version 2.0 of our Fusion gene microarray (version 1.0 described by PMID: 19152679 and GEO, GPL8078) to screen cancer cell lines for known fusion genes We assembled a comprehensive database of published fusion ...
Organism: Homo sapiens
Type: Expression profiling by array; Genome variation profiling by array
Platform: GPL11054 67 Samples
FTP download: GEO (PAIR) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE24nnn/GSE24737/
Series Accession: GSE24737 ID: 200024737
308. Analysis of transcriptome in ectopic versus orthotopic thyroid tissue.
(Submitter supplied) Congenital hypothyroidism from thyroid dysgenesis (CHTD) is a sporadic disease characterized by defects in the differentiation, migration or growth of thyroid tissue. Of these defects, incomplete migration resulting in ectopic th...
Organism: Homo sapiens
Type: Expression profiling by array
Platform: GPL6254 8 Samples
FTP download: GEO (GPR) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE16nnn/GSE16804/
Series Accession: GSE16804 ID: 200016804
309. Time course for bladder UCC development in UPII-SV40Tag mice
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
364 DataSets 1121 Series 11 Related Platforms 42179 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPLnnn/GPL96/
Platform Accession: GPL96 ID: 100000096
344. [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 18, 20...
Organism: Homo sapiens
136 DataSets 1799 Series 26 Related Platforms 37103 Samples
FTP download: GEO ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL6nnn/GPL6244/
Platform Accession: GPL6244 ID: 100006244
345. Illumina HumanHT-12 V4.0 expression beadchip
(Submitter supplied) The HumanHT-12 v4 Expression BeadChip provides high throughput processing of 12 samples per BeadChip without the need for expensive, specialized automation. The BeadChip is designed to support flexible usage across a wide-spectru...
Organism: Homo sapiens
51 DataSets 2760 Series 4 Related Platforms 97140 Samples
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL10nnn/GPL10558/
Platform Accession: GPL10558 ID: 100010558
346. CRD vs 10426T
Organism: Homo sapiens
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL18573 Series: GSE136401
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX6780025
Sample Accession: GSM4048224 ID: 304048224
482. vh127
Organism: Homo sapiens
Source name: Micropapillary High Grade T1 Urothelial Bladder Cancer
Platform: GPL18573 Series: GSE136401
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX6780024
Sample Accession: GSM4048223 ID: 304048223
483. vh126
Organism: Homo sapiens
Source name: Micropapillary High Grade T1 Urothelial Bladder Cancer
Platform: GPL18573 Series: GSE136401
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX6780023
Sample Accession: GSM4048222 ID: 304048222
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
Source name: UCB positive Male
Platform: GPL17692 Series: GSE138118
FTP download: GEO (CEL, CHP) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM4100nnn/GSM4100425/
Sample Accession: GSM4100425 ID: 304100425
956. B017P UCB positive Blood
Organism: Homo sapiens
Source name: UCB positive Male
Platform: GPL17692 Series: GSE138118
FTP download: GEO (CEL, CHP) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM4100nnn/GSM4100424/
Sample Accession: GSM4100424 ID: 304100424
957. B016P UCB positive Blood
Organism: Homo sapiens
Source name: UCB positive Male
Platform: GPL17692 Series: GSE138118
FTP download: GEO (CEL, CHP) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM4100nnn/GSM4100423/
Sample Accession: GSM4100423 ID: 304100423
958. B015P UCB positive Blood
Organism: Homo sapiens
data/bladder_cancer_GEO.txt view on Meta::CPAN
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107162/
Sample Accession: GSM3107162 ID: 303107162
2321. Bladder Cancer [BL0425]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107161/
Sample Accession: GSM3107161 ID: 303107161
2322. Bladder Cancer [BL0424]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107160/
Sample Accession: GSM3107160 ID: 303107160
2323. Bladder Cancer [BL0423]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
data/bladder_cancer_GEO.txt view on Meta::CPAN
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107084/
Sample Accession: GSM3107084 ID: 303107084
2399. Bladder Cancer [BL0325]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486 GSE113740
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107083/
Sample Accession: GSM3107083 ID: 303107083
2400. Bladder Cancer [BL0324]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107082/
Sample Accession: GSM3107082 ID: 303107082
2401. Bladder Cancer [BL0323]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
data/bladder_cancer_GEO.txt view on Meta::CPAN
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107005/
Sample Accession: GSM3107005 ID: 303107005
2478. Bladder Cancer [BL0225]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107004/
Sample Accession: GSM3107004 ID: 303107004
2479. Bladder Cancer [BL0224]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3107nnn/GSM3107003/
Sample Accession: GSM3107003 ID: 303107003
2480. Bladder Cancer [BL0223]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
data/bladder_cancer_GEO.txt view on Meta::CPAN
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3106nnn/GSM3106865/
Sample Accession: GSM3106865 ID: 303106865
2618. Bladder Cancer [BL0028]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3106nnn/GSM3106864/
Sample Accession: GSM3106864 ID: 303106864
2619. Bladder Cancer [BL0024]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM3106nnn/GSM3106863/
Sample Accession: GSM3106863 ID: 303106863
2620. Bladder Cancer [BL0023]
Organism: Homo sapiens
Source name: Serum
Platform: GPL21263 Series: GSE113486
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL16791 Series: GSE103990
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX3197250
Sample Accession: GSM2787431 ID: 302787431
2884. LPF1 (12)
Organism: Homo sapiens
Source name: human bladder cancer cell line, MGH-U3
Platform: GPL15236 Series: GSE84731 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249314/
Sample Accession: GSM2249314 ID: 302249314
2885. LPF2 (11)
Organism: Homo sapiens
Source name: human bladder cancer cell line, MGH-U3
Platform: GPL15236 Series: GSE84731 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249313/
Sample Accession: GSM2249313 ID: 302249313
2886. LPF3 (10)
Organism: Homo sapiens
Source name: human bladder cancer cell line, MGH-U3
Platform: GPL15236 Series: GSE84731 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249312/
Sample Accession: GSM2249312 ID: 302249312
2887. SiPool FGFR3 (5)
Organism: Homo sapiens
Source name: human bladder cancer cell line, MGH-U3
Platform: GPL15236 Series: GSE84731 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249311/
Sample Accession: GSM2249311 ID: 302249311
2888. Si2 FGFR3 (4)
Organism: Homo sapiens
Source name: human bladder cancer cell line, MGH-U3
Platform: GPL15236 Series: GSE84731 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249310/
Sample Accession: GSM2249310 ID: 302249310
2889. Si1 FGFR3 (1)
Organism: Homo sapiens
Source name: human bladder cancer cell line, MGH-U3
Platform: GPL15236 Series: GSE84731 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249309/
Sample Accession: GSM2249309 ID: 302249309
2890. RT112 - siFGFR3#4 - 5 nM
Organism: Homo sapiens
Source name: human bladder cancer cell line, RT112
Platform: GPL19109 Series: GSE84732 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249319/
Sample Accession: GSM2249319 ID: 302249319
2891. RT112 - siFGFR3#3 - 5 nM
Organism: Homo sapiens
Source name: human bladder cancer cell line, RT112
Platform: GPL19109 Series: GSE84732 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249318/
Sample Accession: GSM2249318 ID: 302249318
2892. RT112 - lipo#3
Organism: Homo sapiens
Source name: human bladder cancer cell line, RT112
Platform: GPL19109 Series: GSE84732 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249317/
Sample Accession: GSM2249317 ID: 302249317
2893. RT112 - lipo#2
Organism: Homo sapiens
Source name: human bladder cancer cell line, RT112
Platform: GPL19109 Series: GSE84732 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249316/
Sample Accession: GSM2249316 ID: 302249316
2894. RT112 - lipo#1
Organism: Homo sapiens
Source name: human bladder cancer cell line, RT112
Platform: GPL19109 Series: GSE84732 GSE84733
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2249nnn/GSM2249315/
Sample Accession: GSM2249315 ID: 302249315
2895. shBLACAT2#2
Organism: Homo sapiens
Source name: bladder cancer cell line UM-UC-3
Platform: GPL16791 Series: GSE101287
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX2997161
Sample Accession: GSM2700641 ID: 302700641
2896. shBLACAT2#1
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL21290 Series: GSE107734 GSE107783
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX3450325
Sample Accession: GSM2877301 ID: 302877301
2908. H3K27Ac_S427F_Rep2
Organism: Homo sapiens
Source name: bladder cancer cells
Platform: GPL21290 Series: GSE107734 GSE107783
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX3450324
Sample Accession: GSM2877300 ID: 302877300
2909. H3K27Ac_S427F_Rep1
Organism: Homo sapiens
Source name: bladder cancer cells
Platform: GPL21290 Series: GSE107734 GSE107783
FTP download:
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX3450323
Sample Accession: GSM2877299 ID: 302877299
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470525/
Sample Accession: GSM2470525 ID: 302470525
2998. bladder_cancer_turbt_sample_299
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470524/
Sample Accession: GSM2470524 ID: 302470524
2999. bladder_cancer_turbt_sample_298
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470523/
Sample Accession: GSM2470523 ID: 302470523
3000. bladder_cancer_turbt_sample_297
Organism: Homo sapiens
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470425/
Sample Accession: GSM2470425 ID: 302470425
3098. bladder_cancer_turbt_sample_199
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470424/
Sample Accession: GSM2470424 ID: 302470424
3099. bladder_cancer_turbt_sample_198
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470423/
Sample Accession: GSM2470423 ID: 302470423
3100. bladder_cancer_turbt_sample_197
Organism: Homo sapiens
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470325/
Sample Accession: GSM2470325 ID: 302470325
3198. bladder_cancer_turbt_sample_99
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470324/
Sample Accession: GSM2470324 ID: 302470324
3199. bladder_cancer_turbt_sample_98
Organism: Homo sapiens
Source name: FFPE bladder cancer
Platform: GPL22995 Series: GSE87304
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM2470nnn/GSM2470323/
Sample Accession: GSM2470323 ID: 302470323
3200. bladder_cancer_turbt_sample_97
Organism: Homo sapiens
data/bladder_cancer_GEO.txt view on Meta::CPAN
Platform: GPL16558 Series: GSE44438
FTP download: GEO (BED, WIG) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1085nnn/GSM1085346/
SRA Run Selector: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRX243928
Sample Accession: GSM1085346 ID: 301085346
4375. Bladder cancer tumor_12
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246534/
Sample Accession: GSM1246534 ID: 301246534
4376. Bladder cancer tumor_11
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246533/
Sample Accession: GSM1246533 ID: 301246533
4377. Bladder cancer tumor_10
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246532/
Sample Accession: GSM1246532 ID: 301246532
4378. Bladder cancer tumor_09
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246531/
Sample Accession: GSM1246531 ID: 301246531
4379. Bladder cancer tumor_08
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246530/
Sample Accession: GSM1246530 ID: 301246530
4380. Bladder cancer tumor_07
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246529/
Sample Accession: GSM1246529 ID: 301246529
4381. Bladder cancer tumor_06
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246528/
Sample Accession: GSM1246528 ID: 301246528
4382. Bladder cancer tumor_05
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246527/
Sample Accession: GSM1246527 ID: 301246527
4383. Bladder cancer tumor_04
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246526/
Sample Accession: GSM1246526 ID: 301246526
4384. Bladder cancer tumor_03
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246525/
Sample Accession: GSM1246525 ID: 301246525
4385. Bladder cancer tumor_02
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246524/
Sample Accession: GSM1246524 ID: 301246524
4386. Bladder cancer tumor_01
Organism: Homo sapiens
Source name: Surgical speciment from a patient with bladder cancer
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246522/
Sample Accession: GSM1246522 ID: 301246522
4387. Normal bladder mucosa normal_03
Organism: Homo sapiens
Source name: Biopsy specimen from normal bladder mucosa
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246521/
Sample Accession: GSM1246521 ID: 301246521
4388. Normal bladder mucosa normal_02
Organism: Homo sapiens
Source name: Biopsy specimen from normal bladder mucosa
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246520/
Sample Accession: GSM1246520 ID: 301246520
4389. Normal bladder mucosa normal_01
Organism: Homo sapiens
Source name: Biopsy specimen from normal bladder mucosa
Platform: GPL13825 Series: GSE51493
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1246nnn/GSM1246519/
Sample Accession: GSM1246519 ID: 301246519
4390. 2.2. Bladder cancer tissue
Organism: Homo sapiens
Source name: Bladder cancer tissue
Platform: GPL6884 Series: GSE52519
Sample Accession: GSM1268198 ID: 301268198
4391. 8. Bladder cancer tissue
Organism: Homo sapiens
Source name: Bladder cancer tissue
data/bladder_cancer_GEO.txt view on Meta::CPAN
Organism: Homo sapiens
Source name: Metastatic Bladder Cancer
Platform: GPL10150 Series: GSE39281 GSE39282
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM960nnn/GSM960025/
Sample Accession: GSM960025 ID: 300960025
4704. Metastatic Bladder Cancer 1571
Organism: Homo sapiens
Source name: Metastatic Bladder Cancer
Platform: GPL10150 Series: GSE39281 GSE39282
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM960nnn/GSM960024/
Sample Accession: GSM960024 ID: 300960024
4705. Metastatic Bladder Cancer 1570
Organism: Homo sapiens
Source name: Metastatic Bladder Cancer
Platform: GPL10150 Series: GSE39281 GSE39282
FTP download: GEO (TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM960nnn/GSM960023/
Sample Accession: GSM960023 ID: 300960023
4706. Metastatic Bladder Cancer 1569
Organism: Homo sapiens
data/bladder_cancer_GEO.txt view on Meta::CPAN
Source name: Bladder tumor UC_0230_1
Platform: GPL6947 Series: GSE32548 GSE32549
Sample Accession: GSM806878 ID: 300806878
5010. Bladder tumor UC_0226_1.RNA.e1.a1.lbe1
Organism: Homo sapiens
Source name: Bladder tumor UC_0226_1
Platform: GPL6947 Series: GSE32548 GSE32549
Sample Accession: GSM806877 ID: 300806877
5011. Bladder tumor UC_0224_1.RNA.e1.a1.lbe1
Organism: Homo sapiens
Source name: Bladder tumor UC_0224_1
Platform: GPL6947 Series: GSE32548 GSE32549
Sample Accession: GSM806876 ID: 300806876
5012. Bladder tumor UC_0223_1.RNA.e1.a1.lbe1
Organism: Homo sapiens
Source name: Bladder tumor UC_0223_1
Platform: GPL6947 Series: GSE32548 GSE32549
Sample Accession: GSM806875 ID: 300806875
5013. Bladder tumor UC_0218_2.RNA.e1.a1.lbe1
data/bladder_cancer_GEO.txt view on Meta::CPAN
FTP download: GEO (GPR) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM806nnn/GSM806021/
Sample Accession: GSM806021 ID: 300806021
5145. Bladder tumor UC_0226_1_aCGH_h1
Organism: Homo sapiens
Source name: bladder tumor UC_0226_1 (channel 1) Reference male DNA (channel 2)
Platform: GPL4723 Series: GSE32535 GSE32549
FTP download: GEO (GPR) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM806nnn/GSM806020/
Sample Accession: GSM806020 ID: 300806020
5146. Bladder tumor UC_0224_1_aCGH_h1
Organism: Homo sapiens
Source name: bladder tumor UC_0224_1 (channel 1) Reference male DNA (channel 2)
Platform: GPL4723 Series: GSE32535 GSE32549
FTP download: GEO (GPR) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM806nnn/GSM806019/
Sample Accession: GSM806019 ID: 300806019
5147. Bladder tumor UC_0223_1_aCGH_h1
Organism: Homo sapiens
Source name: bladder tumor UC_0223_1 (channel 1) Reference male DNA (channel 2)
Platform: GPL4723 Series: GSE32535 GSE32549
FTP download: GEO (GPR) ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM806nnn/GSM806018/
Sample Accession: GSM806018 ID: 300806018
data/bladder_cancer_GEO.txt view on Meta::CPAN
5516. Primary bladder cancer BT122
Organism: Homo sapiens
Source name: Primary bladder cancer
Platform: GPL6102 Series: GSE13507
Sample Accession: GSM340725 ID: 300340725
5517. Primary bladder cancer BT121
Organism: Homo sapiens
Source name: Primary bladder cancer
Platform: GPL6102 Series: GSE13507
Sample Accession: GSM340724 ID: 300340724
5518. Primary bladder cancer BT120
Organism: Homo sapiens
Source name: Primary bladder cancer
Platform: GPL6102 Series: GSE13507
Sample Accession: GSM340723 ID: 300340723
5519. Primary bladder cancer BT118
Organism: Homo sapiens
Source name: Primary bladder cancer
data/bladder_cancer_GEO.txt view on Meta::CPAN
5585. Primary bladder cancer BT021
Organism: Homo sapiens
Source name: Primary bladder cancer
Platform: GPL6102 Series: GSE13507
Sample Accession: GSM340625 ID: 300340625
5586. Primary bladder cancer BT020
Organism: Homo sapiens
Source name: Primary bladder cancer
Platform: GPL6102 Series: GSE13507
Sample Accession: GSM340624 ID: 300340624
5587. Primary bladder cancer BT019
Organism: Homo sapiens
Source name: Primary bladder cancer
Platform: GPL6102 Series: GSE13507
Sample Accession: GSM340623 ID: 300340623
5588. Primary bladder cancer BT018
Organism: Homo sapiens
Source name: Primary bladder cancer
data/bladder_cancer_GEO.txt view on Meta::CPAN
5797. JP 253 Cells grown on plastic, Replicate 1
Organism: Homo sapiens
Source name: JP 253 grown on plastic
Platform: GPL131 Series: GSE796
Sample Accession: GSM12520 ID: 300012520
5798. HUC Cells on Plastic Replicate 1
Organism: Homo sapiens
Source name: HUC Cells on Plastic
Platform: GPL131 Series: GSE796
Sample Accession: GSM12477 ID: 300012477
results/BLADDER-CANCER_2021-08-24_h1937.out view on Meta::CPAN
1.
Platform: GPL570 24 Samples
Organism: Homo sapiens
Found 'more...': Checking abstract further...
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE166nnn/GSE166716/
Prognostic Text filter: <No prognostic keywords found>
2.
4 related Platforms 26 Samples
Organism: Homo sapiens
FTP download: GEO (BED, BW) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE140nnn/GSE140808/
3.
Platform: GPL570 3 Samples
results/BLADDER-CANCER_2021-08-24_h1937.out view on Meta::CPAN
Prognostic Text filter: <No prognostic keywords found>
12.
Platform: GPL570 92 Samples
Organism: Homo sapiens
FTP download: GEO (CEL, CHP) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE31nnn/GSE31189/
13.
Platform: GPL96 19 Samples
Organism: Homo sapiens
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE37nnn/GSE37317/
14.
Dataset: GDS4454 Platform: GPL570 24 Samples
Organism: Homo sapiens
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE41nnn/GSE41035/
15.
Platform: GPL570 Series: GSE41035 24 Samples
Organism: Homo sapiens
FTP download: GEO (CEL) ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS4nnn/GDS4454/
16.
4 related Platforms 121 Samples
Organism: Homo sapiens
FTP download: GEO (BED, TXT) ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE38nnn/GSE38495/
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